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Getting 'PROSITE' information from database.
2XQG
Biol. Unit 1
Info
Asym.Unit (200 KB)
Biol.Unit 1, α-C (1.5 MB)
Biol.Unit 1 (1.5 MB)
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(1)
Title
:
X-RAY STRUCTURE OF HUMAN BUTYRYLCHOLINESTERASE INHIBITED BY RACEMIC VR
Authors
:
M. Wandhammer, E. Carletti, E. Gillon, P. Masson, M. Goeldner, D. Noort
Date
:
02 Sep 10 (Deposition) - 23 Mar 11 (Release) - 06 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A
Biol. Unit 1: A (8x)
Keywords
:
Hydrolase, Nerve Agent, Bioscavenger
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Wandhammer, E. Carletti, M. Van Der Schans, E. Gillon, Y. Nicolet P. Masson, M. Goeldner, D. Noort, F. Nachon
Structural Study Of The Complex Stereoselectivity Of Human Butyrylcholinesterase For The Neurotoxic V-Agents.
J. Biol. Chem. V. 286 16783 2011
[
close entry info
]
Hetero Components
(5, 288)
Info
All Hetero Components
1a: BROMIDE ION (BRa)
2a: CALCIUM ION (CAa)
2b: CALCIUM ION (CAb)
2c: CALCIUM ION (CAc)
3a: CHLORIDE ION (CLa)
4a: BETA-L-FUCOSE (FULa)
4b: BETA-L-FUCOSE (FULb)
5a: GLYCINE (GLYa)
7a: N-ACETYL-D-GLUCOSAMINE (NAGa)
7b: N-ACETYL-D-GLUCOSAMINE (NAGb)
7c: N-ACETYL-D-GLUCOSAMINE (NAGc)
7d: N-ACETYL-D-GLUCOSAMINE (NAGd)
7e: N-ACETYL-D-GLUCOSAMINE (NAGe)
7f: N-ACETYL-D-GLUCOSAMINE (NAGf)
7g: N-ACETYL-D-GLUCOSAMINE (NAGg)
7h: N-ACETYL-D-GLUCOSAMINE (NAGh)
6a: SODIUM ION (NAa)
6b: SODIUM ION (NAb)
8a: SULFATE ION (SO4a)
8b: SULFATE ION (SO4b)
9a: UNKNOWN ATOM OR ION (UNXa)
9b: UNKNOWN ATOM OR ION (UNXb)
9c: UNKNOWN ATOM OR ION (UNXc)
9d: UNKNOWN ATOM OR ION (UNXd)
9e: UNKNOWN ATOM OR ION (UNXe)
9f: UNKNOWN ATOM OR ION (UNXf)
9g: UNKNOWN ATOM OR ION (UNXg)
9h: UNKNOWN ATOM OR ION (UNXh)
9i: UNKNOWN ATOM OR ION (UNXi)
9j: UNKNOWN ATOM OR ION (UNXj)
9k: UNKNOWN ATOM OR ION (UNXk)
9l: UNKNOWN ATOM OR ION (UNXl)
9m: UNKNOWN ATOM OR ION (UNXm)
9n: UNKNOWN ATOM OR ION (UNXn)
9o: UNKNOWN ATOM OR ION (UNXo)
9p: UNKNOWN ATOM OR ION (UNXp)
9q: UNKNOWN ATOM OR ION (UNXq)
9r: UNKNOWN ATOM OR ION (UNXr)
9s: UNKNOWN ATOM OR ION (UNXs)
9t: UNKNOWN ATOM OR ION (UNXt)
9u: UNKNOWN ATOM OR ION (UNXu)
9v: UNKNOWN ATOM OR ION (UNXv)
9w: UNKNOWN ATOM OR ION (UNXw)
10a: 2-METHYLPROPYL HYDROGEN (R)-METHYL... (VRa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BR
-1
Ligand/Ion
BROMIDE ION
2
CA
-1
Ligand/Ion
CALCIUM ION
3
CL
-1
Ligand/Ion
CHLORIDE ION
4
FUL
16
Ligand/Ion
BETA-L-FUCOSE
5
GLY
8
Mod. Amino Acid
GLYCINE
6
NA
-1
Ligand/Ion
SODIUM ION
7
NAG
64
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
8
SO4
16
Ligand/Ion
SULFATE ION
9
UNX
184
Ligand/Ion
UNKNOWN ATOM OR ION
10
VR
-1
Ligand/Ion
2-METHYLPROPYL HYDROGEN (R)-METHYLPHOSPHONATE
[
close Hetero Component info
]
Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLY A:116 , GLY A:117 , SER A:198 , ALA A:199 , TRP A:231 , LEU A:286 , VAL A:288 , HIS A:438
BINDING SITE FOR RESIDUE VR A1530
02
AC2
SOFTWARE
LEU A:18 , TYR A:61 , TRP A:98 , ASP A:129 , LYS A:131
BINDING SITE FOR RESIDUE GLY A1548
03
AC3
SOFTWARE
GLN A:316 , ASN A:414 , ASN A:415
BINDING SITE FOR RESIDUE SO4 A1549
04
AC4
SOFTWARE
HIS A:372 , PHE A:521 , PHE A:525 , HOH A:2413
BINDING SITE FOR RESIDUE SO4 A1550
05
AC5
SOFTWARE
THR A:512 , HOH A:2381
BINDING SITE FOR RESIDUE CL A1566
06
AC6
SOFTWARE
HOH A:2040 , HOH A:2179
BINDING SITE FOR RESIDUE CA A1551
07
AC7
SOFTWARE
THR A:508 , HOH A:2355
BINDING SITE FOR RESIDUE CA A1552
08
AC8
SOFTWARE
TYR A:420
BINDING SITE FOR RESIDUE CA A1553
09
AC9
SOFTWARE
ARG A:347 , GLN A:351
BINDING SITE FOR RESIDUE BR A1554
10
BC1
SOFTWARE
TYR A:385
BINDING SITE FOR RESIDUE NA A1567
11
BC2
SOFTWARE
PHE A:525
BINDING SITE FOR RESIDUE NA A1555
12
BC3
SOFTWARE
ASN A:106 , ASN A:188 , LYS A:190 , HOH A:2416 , HOH A:2417
BINDING SITE FOR RESIDUE NAG A1559
13
BC4
SOFTWARE
ASN A:57 , HOH A:2050
BINDING SITE FOR RESIDUE NAG A1560
14
BC5
SOFTWARE
ARG A:465 , ASN A:485
BINDING SITE FOR RESIDUE NAG A1561
15
BC6
SOFTWARE
ASN A:256 , HOH A:2419
BINDING SITE FOR RESIDUE NAG A1562
16
BC7
SOFTWARE
TYR A:237 , GLU A:238 , ASN A:241 , ASN A:245 , PHE A:278 , VAL A:280 , PRO A:281 , HOH A:2200
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 241 RESIDUES 1563 TO 1565
17
BC8
SOFTWARE
PRO A:335 , GLY A:336 , SER A:338 , ASN A:341 , ASN A:342 , HOH A:2414 , HOH A:2415
BINDING SITE FOR CHAIN A OF SUGAR BOUND TO ASN A 341 RESIDUES 1556 TO 1558
[
close Site info
]
SAPs(SNPs)/Variants
(42, 336)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
01: VAR_072094 (K12R, chain A, )
02: VAR_040012 (T24M, chain A, )
03: VAR_040013 (F28I, chain A, )
04: VAR_040014 (Y33C, chain A, )
05: VAR_072730 (A34V, chain A, )
06: VAR_040015 (P37S, chain A, )
07: VAR_002360 (D70G, chain A, )
08: VAR_040016 (D70H, chain A, )
09: VAR_072095 (G75R, chain A, )
10: VAR_072096 (E90D, chain A, )
11: VAR_040017 (N96Y, chain A, )
12: VAR_072097 (I99M, chain A, )
13: VAR_040018 (P100S, chain A, )
14: VAR_040019 (G115D, chain A, )
15: VAR_040020 (L125F, chain A, )
16: VAR_040021 (Y128C, chain A, )
17: VAR_040022 (V142M, chain A, )
18: VAR_040023 (D170E, chain A, )
19: VAR_040024 (S198G, chain A, )
20: VAR_040025 (A199V, chain A, )
21: VAR_040026 (A201T, chain A, )
22: VAR_072098 (V204D, chain A, )
23: VAR_040027 (T243M, chain A, )
24: VAR_040028 (T250P, chain A, )
25: VAR_040029 (E255D, chain A, )
26: VAR_040030 (K267R, chain A, )
27: VAR_072099 (V294M, chain A, )
28: VAR_040031 (L307P, chain A, )
29: VAR_040032 (A328D, chain A, )
30: VAR_002362 (L330I, chain A, )
31: VAR_072100 (G333C, chain A, )
32: VAR_040033 (G365R, chain A, )
33: VAR_040034 (R386C, chain A, )
34: VAR_040035 (G390V, chain A, )
35: VAR_040036 (F418S, chain A, )
36: VAR_040037 (E460K, chain A, )
37: VAR_072101 (R470W, chain A, )
38: VAR_040038 (W471R, chain A, )
39: VAR_040039 (F474L, chain A, )
40: VAR_040040 (E497V, chain A, )
41: VAR_040041 (R515C, chain A, )
42: VAR_040042 (Q518L, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_072094
K
40
R
CHLE_HUMAN
Polymorphism
116047990
A
K
12
R
02
UniProt
VAR_040012
T
52
M
CHLE_HUMAN
Disease (BChE deficiency)
56309853
A
T
24
M
03
UniProt
VAR_040013
F
56
I
CHLE_HUMAN
Disease (BChE deficiency)
---
A
F
28
I
04
UniProt
VAR_040014
Y
61
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A
Y
33
C
05
UniProt
VAR_072730
A
62
V
CHLE_HUMAN
Disease (BChE deficiency)
---
A
A
34
V
06
UniProt
VAR_040015
P
65
S
CHLE_HUMAN
Disease (BChE deficiency)
---
A
P
37
S
07
UniProt
VAR_002360
D
98
G
CHLE_HUMAN
Disease (BChE deficiency)
1799807
A
D
70
G
08
UniProt
VAR_040016
D
98
H
CHLE_HUMAN
Disease (BChE deficiency)
---
A
D
70
H
09
UniProt
VAR_072095
G
103
R
CHLE_HUMAN
Disease (BChE deficiency)
---
A
G
75
R
10
UniProt
VAR_072096
E
118
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A
E
90
D
11
UniProt
VAR_040017
N
124
Y
CHLE_HUMAN
Disease (BChE deficiency)
---
A
N
96
Y
12
UniProt
VAR_072097
I
127
M
CHLE_HUMAN
Polymorphism
---
A
I
99
M
13
UniProt
VAR_040018
P
128
S
CHLE_HUMAN
Disease (BChE deficiency)
3732880
A
P
100
S
14
UniProt
VAR_040019
G
143
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A
G
115
D
15
UniProt
VAR_040020
L
153
F
CHLE_HUMAN
Disease (BChE deficiency)
---
A
L
125
F
16
UniProt
VAR_040021
Y
156
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A
Y
128
C
17
UniProt
VAR_040022
V
170
M
CHLE_HUMAN
Disease (BChE deficiency)
---
A
V
142
M
18
UniProt
VAR_040023
D
198
E
CHLE_HUMAN
Disease (BChE deficiency)
---
A
D
170
E
19
UniProt
VAR_040024
S
226
G
CHLE_HUMAN
Disease (BChE deficiency)
---
A
S
198
G
20
UniProt
VAR_040025
A
227
V
CHLE_HUMAN
Disease (BChE deficiency)
---
A
A
199
V
21
UniProt
VAR_040026
A
229
T
CHLE_HUMAN
Disease (BChE deficiency)
---
A
A
201
T
22
UniProt
VAR_072098
V
232
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A
V
204
D
23
UniProt
VAR_040027
T
271
M
CHLE_HUMAN
Disease (BChE deficiency)
28933389
A
T
243
M
24
UniProt
VAR_040028
T
278
P
CHLE_HUMAN
Disease (BChE deficiency)
---
A
T
250
P
25
UniProt
VAR_040029
E
283
D
CHLE_HUMAN
Polymorphism
16849700
A
E
255
D
26
UniProt
VAR_040030
K
295
R
CHLE_HUMAN
Disease (BChE deficiency)
115624085
A
K
267
R
27
UniProt
VAR_072099
V
322
M
CHLE_HUMAN
Polymorphism
---
A
V
294
M
28
UniProt
VAR_040031
L
335
P
CHLE_HUMAN
Disease (BChE deficiency)
---
A
L
307
P
29
UniProt
VAR_040032
A
356
D
CHLE_HUMAN
Disease (BChE deficiency)
---
A
A
328
D
30
UniProt
VAR_002362
L
358
I
CHLE_HUMAN
Disease (BChE deficiency)
121918557
A
L
330
I
31
UniProt
VAR_072100
G
361
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A
G
333
C
32
UniProt
VAR_040033
G
393
R
CHLE_HUMAN
Disease (BChE deficiency)
115129687
A
G
365
R
33
UniProt
VAR_040034
R
414
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A
R
386
C
34
UniProt
VAR_040035
G
418
V
CHLE_HUMAN
Disease (BChE deficiency)
28933390
A
G
390
V
35
UniProt
VAR_040036
F
446
S
CHLE_HUMAN
Disease (BChE deficiency)
---
A
F
418
S
36
UniProt
VAR_040037
E
488
K
CHLE_HUMAN
Disease (BChE deficiency)
---
A
E
460
K
37
UniProt
VAR_072101
R
498
W
CHLE_HUMAN
Polymorphism
115017300
A
R
470
W
38
UniProt
VAR_040038
W
499
R
CHLE_HUMAN
Disease (BChE deficiency)
---
A
W
471
R
39
UniProt
VAR_040039
F
502
L
CHLE_HUMAN
Disease (BChE deficiency)
---
A
F
474
L
40
UniProt
VAR_040040
E
525
V
CHLE_HUMAN
Disease (BChE deficiency)
---
A
E
497
V
41
UniProt
VAR_040041
R
543
C
CHLE_HUMAN
Disease (BChE deficiency)
---
A
R
515
C
42
UniProt
VAR_040042
Q
546
L
CHLE_HUMAN
Disease (BChE deficiency)
---
A
Q
518
L
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 16)
Info
All PROSITE Patterns/Profiles
1: CARBOXYLESTERASE_B_2 (A:90-100)
2: CARBOXYLESTERASE_B_1 (A:185-200)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARBOXYLESTERASE_B_2
PS00941
Carboxylesterases type-B signature 2.
CHLE_HUMAN
118-128
8
A:90-100
2
CARBOXYLESTERASE_B_1
PS00122
Carboxylesterases type-B serine active site.
CHLE_HUMAN
213-228
8
A:185-200
[
close PROSITE info
]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2xqga_ (A:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
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(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
alpha/beta-Hydrolases
(971)
Superfamily
:
alpha/beta-Hydrolases
(971)
Family
:
Acetylcholinesterase-like
(219)
Protein domain
:
automated matches
(91)
Human (Homo sapiens) [TaxId: 9606]
(35)
1a
d2xqga_
A:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_COesterase_2xqgA01 (A:3-522)
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Clans
(
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(
)
Families
(
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(
)
Organisms
(
)
(
)
Clan
:
AB_hydrolase
(347)
Family
:
COesterase
(79)
Homo sapiens (Human)
(38)
1a
COesterase-2xqgA01
A:3-522
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
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Nucleic
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Hetero
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All Atoms
Protein & NOT Variant
Protein & NOT Site
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Asymmetric Unit 1
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Asymmetric Unit 3
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Asymmetric Unit 6
Asymmetric Unit 7
Asymmetric Unit 8
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