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Asym. Unit
Info
Asym.Unit (41 KB)
Biol.Unit 1 (36 KB)
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(1)
Title
:
XPT-PBUX C74U RIBOSWITCH FROM B. SUBTILIS BOUND TO A TRIAZOLO-TRIAZOLE-DIAMINE LIGAND IDENTIFIED BY VIRTUAL SCREENING
Authors
:
P. Daldrop, F. E. Reyes, D. A. Robinson, C. M. Hammond, D. M. J. Lilley, R.
Date
:
06 Aug 10 (Deposition) - 06 Apr 11 (Release) - 06 Apr 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Rna
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Daldrop, F. E. Reyes, D. A. Robinson, C. M. Hammond, D. M. J. Lilley, R. T. Batey, R. Brenk
Novel Ligands For A Purine Riboswitch Discovered By Rna-Ligand Docking
Chem. Biol. V. 18 324 2011
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Hetero Components
(4, 10)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: POTASSIUM ION (Ka)
3a: COBALT HEXAMMINE(III) (NCOa)
3b: COBALT HEXAMMINE(III) (NCOb)
3c: COBALT HEXAMMINE(III) (NCOc)
3d: COBALT HEXAMMINE(III) (NCOd)
3e: COBALT HEXAMMINE(III) (NCOe)
3f: COBALT HEXAMMINE(III) (NCOf)
3g: COBALT HEXAMMINE(III) (NCOg)
4a: 3,6-DIAMINO-1,5-DIHYDRO[1,2,4]TRIA... (ZZRa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
K
1
Ligand/Ion
POTASSIUM ION
3
NCO
7
Ligand/Ion
COBALT HEXAMMINE(III)
4
ZZR
1
Ligand/Ion
3,6-DIAMINO-1,5-DIHYDRO[1,2,4]TRIAZOLO[4,3-B][1,2,4]TRIAZOL-4-IUM
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Sites
(10, 10)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
G A:29 , U A:30 , A A:66 , U A:67 , HOH A:2085 , HOH A:2269 , HOH A:2309 , HOH A:2311 , HOH A:2312 , HOH A:2313
BINDING SITE FOR RESIDUE NCO A1081
02
AC2
SOFTWARE
C A:39 , G A:55 , G A:56 , G A:57 , G A:68 , U A:69 , HOH A:2196 , HOH A:2199 , HOH A:2202 , HOH A:2209 , HOH A:2314 , HOH A:2315 , HOH A:2316
BINDING SITE FOR RESIDUE NCO A1082
03
AC3
SOFTWARE
U A:30 , G A:31 , G A:32 , A A:65 , A A:66 , HOH A:2092 , HOH A:2094 , HOH A:2317 , HOH A:2318 , HOH A:2328
BINDING SITE FOR RESIDUE NCO A1083
04
AC4
SOFTWARE
A A:45 , G A:46 , HOH A:2319
BINDING SITE FOR RESIDUE NCO A1084
05
AC5
SOFTWARE
U A:36 , G A:42 , C A:43 , G A:72 , A A:73
BINDING SITE FOR RESIDUE NCO A1085
06
AC6
SOFTWARE
G A:37 , G A:38 , HOH A:2132 , HOH A:2141 , HOH A:2215 , HOH A:2220 , HOH A:2222 , HOH A:2322 , HOH A:2323 , HOH A:2324
BINDING SITE FOR RESIDUE NCO A1086
07
AC7
SOFTWARE
G A:38 , C A:39 , G A:56 , G A:57 , HOH A:2137 , HOH A:2138 , HOH A:2206 , HOH A:2325 , HOH A:2326
BINDING SITE FOR RESIDUE NCO A1087
08
AC8
SOFTWARE
G A:32 , A A:33 , G A:38 , C A:39 , A A:66 , HOH A:2328
BINDING SITE FOR RESIDUE ACT A1088
09
AC9
SOFTWARE
A A:21 , U A:22 , U A:47 , U A:51 , A A:52 , U A:74 , U A:75 , HOH A:2329
BINDING SITE FOR RESIDUE ZZR A1089
10
BC1
SOFTWARE
HOH A:2276
BINDING SITE FOR RESIDUE K A1090
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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select residue range 5 to 10 in all chains
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Asym.Unit (41 KB)
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