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2XN4
Biol. Unit 2
Info
Asym.Unit (188 KB)
Biol.Unit 1 (93 KB)
Biol.Unit 2 (93 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE KELCH DOMAIN OF HUMAN KLHL2 (MAYVEN)
Authors
:
P. Canning, V. Hozjan, C. D. O. Cooper, V. Ayinampudi, M. Vollmar, A. C. W F. Von Delft, J. Weigelt, C. H. Arrowsmith, A. M. Edwards, C. Bountra, A. N. Bullock
Date
:
30 Jul 10 (Deposition) - 18 Aug 10 (Release) - 27 Mar 13 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Structural Protein, Cytoskeleton
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
P. Canning, C. D. O. Cooper, T. Krojer, J. W. Murray, A. C. W. Pike, A. Chaikuad, T. Keates, C. Thangaratnarajah, V. Hojzan, B. D. Marsden O. Gileadi, S. Knapp, F. Von Delft, A. N. Bullock
Structural Basis For Cul3 Assembly With The Btb-Kelch Family Of E3 Ubiquitin Ligases.
J. Biol. Chem. V. 288 7803 2013
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: 1,2-ETHANEDIOL (EDOa)
1b: 1,2-ETHANEDIOL (EDOb)
2a: SODIUM ION (NAa)
2b: SODIUM ION (NAb)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
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Label:
No.
Name
Count
Type
Full Name
1
EDO
1
Ligand/Ion
1,2-ETHANEDIOL
2
NA
-1
Ligand/Ion
SODIUM ION
3
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(8, 8)
Info
All Sites
1: AC3 (SOFTWARE)
2: AC4 (SOFTWARE)
3: AC5 (SOFTWARE)
4: AC6 (SOFTWARE)
5: AC7 (SOFTWARE)
6: AC8 (SOFTWARE)
7: AC9 (SOFTWARE)
8: BC1 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC3
SOFTWARE
ARG A:321 , ARG A:342 , HOH A:2260 , HOH A:2261 , HOH A:2262 , ARG B:387
BINDING SITE FOR RESIDUE SO4 A 902
2
AC4
SOFTWARE
SER A:415 , ARG A:436 , HOH A:2077 , HOH A:2263 , HOH A:2264 , SER B:341 , ASN B:362 , VAL B:367 , THR B:369 , HOH B:2027
BINDING SITE FOR RESIDUE SO4 A 903
3
AC5
SOFTWARE
GLY A:363 , SER A:364 , HIS B:429 , ALA B:431 , ASN B:474
BINDING SITE FOR RESIDUE EDO A 904
4
AC6
SOFTWARE
ARG B:345 , ARG B:366 , SER B:391
BINDING SITE FOR RESIDUE NA B 900
5
AC7
SOFTWARE
ARG B:510 , LYS B:511 , SER B:512 , HOH B:2267 , HOH B:2268
BINDING SITE FOR RESIDUE SO4 B 901
6
AC8
SOFTWARE
SER A:341 , ASN A:362 , VAL A:367 , THR A:369 , HOH A:2016 , SER B:415 , ARG B:436 , HOH B:2085 , HOH B:2269 , HOH B:2270
BINDING SITE FOR RESIDUE SO4 B 902
7
AC9
SOFTWARE
ARG A:387 , ARG B:321 , ARG B:342 , HOH B:2007 , HOH B:2271 , HOH B:2272
BINDING SITE FOR RESIDUE SO4 B 903
8
BC1
SOFTWARE
HIS A:429 , ASN A:474 , GLY B:363 , SER B:364 , HOH B:2036 , HOH B:2273
BINDING SITE FOR RESIDUE EDO B 904
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2xn4a_ (A:)
1b: SCOP_d2xn4b_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
6-bladed beta-propeller
(327)
Superfamily
:
Kelch motif
(18)
Family
:
automated matches
(4)
Protein domain
:
automated matches
(4)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d2xn4a_
A:
1b
d2xn4b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2xn4A00 (A:306-591)
1b: CATH_2xn4B00 (B:306-591)
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)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
6 Propellor
(215)
Topology
:
Neuraminidase
(215)
Homologous Superfamily
:
Kelch-like ech-associated protein 1
(10)
Human (Homo sapiens)
(5)
1a
2xn4A00
A:306-591
1b
2xn4B00
B:306-591
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Pfam Domains
(1, 12)
Info
all PFAM domains
1a: PFAM_Kelch_1_2xn4B01 (B:532-577)
1b: PFAM_Kelch_1_2xn4B02 (B:532-577)
1c: PFAM_Kelch_1_2xn4B03 (B:532-577)
1d: PFAM_Kelch_1_2xn4B04 (B:532-577)
1e: PFAM_Kelch_1_2xn4B05 (B:532-577)
1f: PFAM_Kelch_1_2xn4B06 (B:532-577)
1g: PFAM_Kelch_1_2xn4B07 (B:532-577)
1h: PFAM_Kelch_1_2xn4B08 (B:532-577)
1i: PFAM_Kelch_1_2xn4B09 (B:532-577)
1j: PFAM_Kelch_1_2xn4B10 (B:532-577)
1k: PFAM_Kelch_1_2xn4B11 (B:532-577)
1l: PFAM_Kelch_1_2xn4B12 (B:532-577)
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Organisms
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)
Clan
:
Beta_propeller
(192)
Family
:
Kelch_1
(10)
Homo sapiens (Human)
(4)
1a
Kelch_1-2xn4B01
B:532-577
1b
Kelch_1-2xn4B02
B:532-577
1c
Kelch_1-2xn4B03
B:532-577
1d
Kelch_1-2xn4B04
B:532-577
1e
Kelch_1-2xn4B05
B:532-577
1f
Kelch_1-2xn4B06
B:532-577
1g
Kelch_1-2xn4B07
B:532-577
1h
Kelch_1-2xn4B08
B:532-577
1i
Kelch_1-2xn4B09
B:532-577
1j
Kelch_1-2xn4B10
B:532-577
1k
Kelch_1-2xn4B11
B:532-577
1l
Kelch_1-2xn4B12
B:532-577
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Chain B
Asymmetric Unit 1
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Asym.Unit (188 KB)
Header - Asym.Unit
Biol.Unit 1 (93 KB)
Header - Biol.Unit 1
Biol.Unit 2 (93 KB)
Header - Biol.Unit 2
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