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2XMM
Asym. Unit
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Asym.Unit (28 KB)
Biol.Unit 1 (23 KB)
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(1)
Title
:
VISUALISING THE METAL-BINDING VERSATILITY OF COPPER TRAFFICKING SITES: H61Y ATX1 SIDE-TO-SIDE
Authors
:
A. Badarau, S. J. Firbank, A. A. Mccarthy, M. J. Banfield, C. Dennison
Date
:
28 Jul 10 (Deposition) - 25 Aug 10 (Release) - 18 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.65
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Metal Transport, Copper Homeostasis, Chaperone, P-Type Atpases
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Badarau, S. J. Firbank, A. A. Mccarthy, M. J. Banfield, C. Dennison
Visualizing The Metal-Binding Versatility Of Copper Trafficking Sites .
Biochemistry V. 49 7798 2010
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Hetero Components
(3, 6)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
3a: SODIUM ION (NAa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
1
Ligand/Ion
CHLORIDE ION
2
CU
4
Ligand/Ion
COPPER (II) ION
3
NA
1
Ligand/Ion
SODIUM ION
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Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:27 , GLN A:29 , HOH A:2064
BINDING SITE FOR RESIDUE NA A1069
2
AC2
SOFTWARE
CYS A:12 , CYS A:15 , CU A:1068 , CU B:1069 , CU B:1070
BINDING SITE FOR RESIDUE CU A1067
3
AC3
SOFTWARE
CYS A:15 , TYR A:61 , CU A:1067 , CYS B:15 , CU B:1070
BINDING SITE FOR RESIDUE CU A1068
4
AC4
SOFTWARE
CYS A:12 , CL A:1066 , CU A:1067 , CYS B:12 , CU B:1070
BINDING SITE FOR RESIDUE CU B1069
5
AC5
SOFTWARE
CU A:1067 , CU A:1068 , CYS B:12 , CYS B:15 , CU B:1069
BINDING SITE FOR RESIDUE CU B1070
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2xmma_ (A:)
1b: SCOP_d2xmmb_ (B:)
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Protein Domains
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Organisms
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Ferredoxin-like
(1795)
Superfamily
:
HMA, heavy metal-associated domain
(79)
Family
:
HMA, heavy metal-associated domain
(59)
Protein domain
:
automated matches
(10)
Synechocystis sp. PCC 6803 [TaxId: 1148]
(2)
1a
d2xmma_
A:
1b
d2xmmb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2xmmA00 (A:2-64)
1b: CATH_2xmmB00 (B:2-64)
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)
Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Alpha-Beta Plaits
(1688)
Homologous Superfamily
:
[code=3.30.70.100, no name defined]
(82)
Pcc 6803 (Synechocystis sp)
(10)
1a
2xmmA00
A:2-64
1b
2xmmB00
B:2-64
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_HMA_2xmmB01 (B:4-62)
1b: PFAM_HMA_2xmmB02 (B:4-62)
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Clans
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Clan
:
no clan defined [family: HMA]
(41)
Family
:
HMA
(41)
Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)
(9)
1a
HMA-2xmmB01
B:4-62
1b
HMA-2xmmB02
B:4-62
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Asymmetric Unit 1
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