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2XL3
Asym. Unit
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Asym.Unit (107 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (52 KB)
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(1)
Title
:
WDR5 IN COMPLEX WITH AN RBBP5 PEPTIDE AND HISTONE H3 PEPTIDE
Authors
:
Z. Odho, S. M. Southall, J. R. Wilson
Date
:
19 Jul 10 (Deposition) - 04 Aug 10 (Release) - 29 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,C,D (1x)
Biol. Unit 2: B,E,F (1x)
Keywords
:
Transcription, Mll Complex, H3K4 Methylation, Wd-40 Beta-Propeller
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
Z. Odho, S. M. Southall, J. R. Wilson
Characterisation Of A Novel Wdr5 Binding Site That Recruits Rbbp5 Through A Conserved Motif And Enhances Methylation Of H3K4 By Mll1.
J. Biol. Chem. V. 285 32967 2010
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Hetero Components
(1, 3)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
1b: GLYCEROL (GOLb)
1c: GLYCEROL (GOLc)
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No.
Name
Count
Type
Full Name
1
GOL
3
Ligand/Ion
GLYCEROL
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Sites
(3, 3)
Info
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TRP B:59 , SER B:117
BINDING SITE FOR RESIDUE GOL B1335
2
AC2
SOFTWARE
TRP A:59 , GLU A:80 , LYS A:81 , SER A:117
BINDING SITE FOR RESIDUE GOL A1335
3
AC3
SOFTWARE
SER A:129 , ASP A:150 , GLU A:151
BINDING SITE FOR RESIDUE GOL A1336
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SAPs(SNPs)/Variants
(0, 0)
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PROSITE Patterns/Profiles
(1, 8)
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1: WD_REPEATS_1 (A:102-116,B:102-116|A:144-158,B:14...)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
WD_REPEATS_1
PS00678
Trp-Asp (WD) repeats signature.
WDR5_MOUSE
102-116
144-158
186-200
274-288
8
A:102-116
B:102-116
A:144-158
B:144-158
A:186-200
B:186-200
A:274-288
B:274-288
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
(1, 14)
Info
all PFAM domains
1a: PFAM_WD40_2xl3B01 (B:291-331)
1b: PFAM_WD40_2xl3B02 (B:291-331)
1c: PFAM_WD40_2xl3B03 (B:291-331)
1d: PFAM_WD40_2xl3B04 (B:291-331)
1e: PFAM_WD40_2xl3B05 (B:291-331)
1f: PFAM_WD40_2xl3B06 (B:291-331)
1g: PFAM_WD40_2xl3B07 (B:291-331)
1h: PFAM_WD40_2xl3B08 (B:291-331)
1i: PFAM_WD40_2xl3B09 (B:291-331)
1j: PFAM_WD40_2xl3B10 (B:291-331)
1k: PFAM_WD40_2xl3B11 (B:291-331)
1l: PFAM_WD40_2xl3B12 (B:291-331)
1m: PFAM_WD40_2xl3B13 (B:291-331)
1n: PFAM_WD40_2xl3B14 (B:291-331)
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Clan
:
Beta_propeller
(192)
Family
:
WD40
(64)
Mus musculus (Mouse)
(4)
1a
WD40-2xl3B01
B:291-331
1b
WD40-2xl3B02
B:291-331
1c
WD40-2xl3B03
B:291-331
1d
WD40-2xl3B04
B:291-331
1e
WD40-2xl3B05
B:291-331
1f
WD40-2xl3B06
B:291-331
1g
WD40-2xl3B07
B:291-331
1h
WD40-2xl3B08
B:291-331
1i
WD40-2xl3B09
B:291-331
1j
WD40-2xl3B10
B:291-331
1k
WD40-2xl3B11
B:291-331
1l
WD40-2xl3B12
B:291-331
1m
WD40-2xl3B13
B:291-331
1n
WD40-2xl3B14
B:291-331
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