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2XCM
Asym. Unit
Info
Asym.Unit (136 KB)
Biol.Unit 1 (67 KB)
Biol.Unit 2 (67 KB)
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(1)
Title
:
COMPLEX OF HSP90 N-TERMINAL, SGT1 CS AND RAR1 CHORD2 DOMAIN
Authors
:
M. Zhang, L. H. Pearl
Date
:
23 Apr 10 (Deposition) - 11 Aug 10 (Release) - 11 Aug 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,C,E (1x)
Biol. Unit 2: B,D,F (1x)
Keywords
:
Chaperone-Protein Binding Complex, Stress Response
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Zhang, Y. Kadota, C. Prodromou, K. Shirasu, L. H. Pearl
Structural Basis For Assembly Of Hsp90-Sgt1-Chord Protein Complexes: Implications For Chaperoning Of Nlr Innate Immunity Receptors
Mol. Cell V. 39 269 2010
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Hetero Components
(3, 8)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
3a: ZINC ION (ZNa)
3b: ZINC ION (ZNb)
3c: ZINC ION (ZNc)
3d: ZINC ION (ZNd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
MG
2
Ligand/Ion
MAGNESIUM ION
3
ZN
4
Ligand/Ion
ZINC ION
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Sites
(8, 8)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
8: AC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:39 , ALA A:43 , ASP A:81 , MET A:86 , ASN A:94 , LEU A:95 , GLY A:123 , VAL A:124 , GLY A:125 , PHE A:126 , THR A:173 , MET A:175 , MG A:1212 , HOH A:2031 , HOH A:2078 , HOH A:2079 , HOH A:2080 , HOH A:2081 , HOH A:2082 , HIS E:188
BINDING SITE FOR RESIDUE ADP A1211
2
AC2
SOFTWARE
ASN A:39 , ADP A:1211 , HOH A:2016 , HOH A:2020
BINDING SITE FOR RESIDUE MG A1212
3
AC3
SOFTWARE
ASN B:39 , ALA B:43 , ASP B:81 , MET B:86 , ASN B:94 , GLY B:123 , VAL B:124 , GLY B:125 , PHE B:126 , THR B:173 , MET B:175 , MG B:1212 , HOH B:2013 , HOH B:2027 , HOH B:2069 , HOH B:2070 , HOH B:2071 , HIS F:188
BINDING SITE FOR RESIDUE ADP B1211
4
AC4
SOFTWARE
ASN B:39 , ADP B:1211 , HOH B:2008 , ASP F:189 , HOH F:2023
BINDING SITE FOR RESIDUE MG B1212
5
AC5
SOFTWARE
CYS E:159 , CYS E:164 , CYS E:178 , HIS E:218
BINDING SITE FOR RESIDUE ZN E1222
6
AC6
SOFTWARE
HIS E:181 , CYS E:196 , CYS E:197 , CYS E:213
BINDING SITE FOR RESIDUE ZN E1223
7
AC7
SOFTWARE
CYS F:159 , CYS F:164 , CYS F:178 , HIS F:218
BINDING SITE FOR RESIDUE ZN F1222
8
AC8
SOFTWARE
HIS F:181 , CYS F:196 , CYS F:197 , CYS F:213
BINDING SITE FOR RESIDUE ZN F1223
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: CHORD (-|E:159-218,F:159-218)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CHORD
PS51401
CHORD domain profile.
RAR1_ARATH
12-71
159-218
2
-
E:159-218
F:159-218
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2xcmc_ (C:)
1b: SCOP_d2xcmd_ (D:)
2a: SCOP_d2xcma_ (A:)
2b: SCOP_d2xcmb_ (B:)
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Families
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(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
HSP20-like chaperones
(18)
Superfamily
:
HSP20-like chaperones
(18)
Family
:
automated matches
(6)
Protein domain
:
automated matches
(6)
Thale cress (Arabidopsis thaliana) [TaxId: 3702]
(1)
1a
d2xcmc_
C:
1b
d2xcmd_
D:
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Superfamily
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Family
:
Heat shock protein 90, HSP90, N-terminal domain
(238)
Protein domain
:
automated matches
(112)
Barley (Hordeum vulgare) [TaxId: 4513]
(1)
2a
d2xcma_
A:
2b
d2xcmb_
B:
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2xcmA00 (A:-2-210)
1b: CATH_2xcmB00 (B:-2-210)
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(
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Heat Shock Protein 90
(209)
Homologous Superfamily
:
[code=3.30.565.10, no name defined]
(205)
Hordeum vulgare. Organism_taxid: 4513.
(1)
1a
2xcmA00
A:-2-210
1b
2xcmB00
B:-2-210
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Pfam Domains
(4, 8)
Info
all PFAM domains
1a: PFAM_CS_2xcmD01 (D:152-228)
1b: PFAM_CS_2xcmD02 (D:152-228)
2a: PFAM_HATPase_c_3_2xcmB01 (B:26-170)
2b: PFAM_HATPase_c_3_2xcmB02 (B:26-170)
3a: PFAM_CHORD_2xcmF01 (F:155-219)
3b: PFAM_CHORD_2xcmF02 (F:155-219)
4a: PFAM_HSP90_2xcmB03 (B:185-210)
4b: PFAM_HSP90_2xcmB04 (B:185-210)
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Clans
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)
Organisms
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)
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)
Clan
:
HSP20
(17)
Family
:
CS
(6)
Arabidopsis thaliana (Mouse-ear cress)
(2)
1a
CS-2xcmD01
D:152-228
1b
CS-2xcmD02
D:152-228
Clan
:
His_Kinase_A
(147)
Family
:
HATPase_c_3
(11)
Hordeum vulgare (Barley)
(2)
2a
HATPase_c_3-2xcmB01
B:26-170
2b
HATPase_c_3-2xcmB02
B:26-170
Clan
:
no clan defined [family: CHORD]
(2)
Family
:
CHORD
(2)
Arabidopsis thaliana (Mouse-ear cress)
(1)
3a
CHORD-2xcmF01
F:155-219
3b
CHORD-2xcmF02
F:155-219
Clan
:
no clan defined [family: HSP90]
(107)
Family
:
HSP90
(107)
Hordeum vulgare (Barley)
(2)
4a
HSP90-2xcmB03
B:185-210
4b
HSP90-2xcmB04
B:185-210
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select all 'ALA' residues (Alanines) in chain 'A'
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select residue range 5 to 10 in all chains
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select residue range 5 to 10 in chain 'A'
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Asym.Unit (136 KB)
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