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2X8H
Asym. Unit
Info
Asym.Unit (107 KB)
Biol.Unit 1 (200 KB)
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(1)
Title
:
THIOREDOXIN GLUTATHIONE REDUCTASE FROM SCHISTOSOMA MANSONI IN COMPLEX WITH GSH
Authors
:
F. Angelucci, D. Dimastrogiovanni, G. Boumis, M. Brunori, A. E. Miele, F. Saccoccia, A. Bellelli
Date
:
09 Mar 10 (Deposition) - 21 Jul 10 (Release) - 07 Dec 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A
Biol. Unit 1: A (2x)
Keywords
:
Flavoprotein, Oxidoreductase, Nadph, Detoxification Pathway
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
F. Angelucci, D. Dimastrogiovanni, G. Boumis, M. Brunori, A. E. Miele, F. Saccoccia, A. Bellelli
Mapping The Catalytic Cycle Of Schistosoma Mansoni Thioredoxin Glutathione Reductase By X-Ray Crystallography
J. Biol. Chem. V. 285 32557 2010
(for further references see the
PDB file header
)
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Hetero Components
(7, 11)
Info
All Hetero Components
1a: BETA-MERCAPTOETHANOL (BMEa)
2a: CALCIUM ION (CAa)
3a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
4a: GLUTATHIONE (GSHa)
5a: DI(HYDROXYETHYL)ETHER (PEGa)
5b: DI(HYDROXYETHYL)ETHER (PEGb)
5c: DI(HYDROXYETHYL)ETHER (PEGc)
5d: DI(HYDROXYETHYL)ETHER (PEGd)
6a: TETRAETHYLENE GLYCOL (PG4a)
7a: TRIETHYLENE GLYCOL (PGEa)
7b: TRIETHYLENE GLYCOL (PGEb)
View:
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No.
Name
Count
Type
Full Name
1
BME
1
Ligand/Ion
BETA-MERCAPTOETHANOL
2
CA
1
Ligand/Ion
CALCIUM ION
3
FAD
1
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
4
GSH
1
Ligand/Ion
GLUTATHIONE
5
PEG
4
Ligand/Ion
DI(HYDROXYETHYL)ETHER
6
PG4
1
Ligand/Ion
TETRAETHYLENE GLYCOL
7
PGE
2
Ligand/Ion
TRIETHYLENE GLYCOL
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Sites
(11, 11)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:113 , GLY A:114 , GLY A:116 , SER A:117 , GLY A:118 , ASP A:137 , TYR A:138 , GLY A:152 , THR A:153 , CYS A:154 , VAL A:157 , GLY A:158 , CYS A:159 , LYS A:162 , ALA A:226 , GLY A:228 , ALA A:256 , THR A:257 , GLY A:258 , TYR A:296 , ARG A:393 , VAL A:400 , GLY A:432 , ASP A:433 , GLN A:440 , LEU A:441 , THR A:442 , PRO A:443 , HIS A:571 , HOH A:2053 , HOH A:2147 , HOH A:2255 , HOH A:2358 , HOH A:2359 , HOH A:2361 , HOH A:2362
BINDING SITE FOR RESIDUE FAD A1594
02
AC2
SOFTWARE
LYS A:25 , CYS A:28 , TYR A:30 , GLN A:60 , THR A:71 , VAL A:72 , PRO A:73 , ASP A:84 , SER A:85 , GLN A:86 , HOH A:2029
BINDING SITE FOR RESIDUE GSH A1595
03
AC3
SOFTWARE
PRO A:542 , ASN A:543 , GLU A:546 , CYS A:574
BINDING SITE FOR RESIDUE BME A1596
04
AC4
SOFTWARE
TYR A:138 , ASN A:225 , THR A:239 , ASP A:240 , GLN A:243 , HOH A:2064
BINDING SITE FOR RESIDUE PGE A1597
05
AC5
SOFTWARE
TRP A:10 , LYS A:13 , THR A:14 , ASP A:420 , TYR A:429 , LEU A:452 , ARG A:455 , ALA A:460 , HOH A:2363
BINDING SITE FOR RESIDUE PGE A1598
06
AC6
SOFTWARE
SER A:318 , LEU A:320 , GLN A:326 , ALA A:329 , GLU A:330 , GLY A:333 , ASP A:334 , GLU A:337 , PHE A:343 , LYS A:345 , HOH A:2364
BINDING SITE FOR RESIDUE PG4 A1599
07
AC7
SOFTWARE
PHE A:564 , ASP A:565 , THR A:567 , THR A:579 , HOH A:2266
BINDING SITE FOR RESIDUE CA A1600
08
AC8
SOFTWARE
GLU A:140 , PRO A:141 , ARG A:260 , GLN A:396 , HOH A:2365
BINDING SITE FOR RESIDUE PEG A1601
09
AC9
SOFTWARE
GLU A:462 , LEU A:463
BINDING SITE FOR RESIDUE PEG A1602
10
BC1
SOFTWARE
SER A:65 , PHE A:66 , LYS A:68
BINDING SITE FOR RESIDUE PEG A1603
11
BC2
SOFTWARE
TYR A:272 , TYR A:284 , GLN A:354 , LYS A:356 , VAL A:358 , LEU A:368
BINDING SITE FOR RESIDUE PEG A1604
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(4, 4)
Info
all PFAM domains
1a: PFAM_Pyr_redox_2x8hA01 (A:288-365)
2a: PFAM_Pyr_redox_2_2x8hA02 (A:109-439)
3a: PFAM_Glutaredoxin_2x8hA03 (A:20-82)
4a: PFAM_Pyr_redox_dim_2x8hA04 (A:469-582)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
NADP_Rossmann
(1239)
Family
:
Pyr_redox
(62)
Schistosoma mansoni (Blood fluke)
(4)
1a
Pyr_redox-2x8hA01
A:288-365
Family
:
Pyr_redox_2
(69)
Schistosoma mansoni (Blood fluke)
(4)
2a
Pyr_redox_2-2x8hA02
A:109-439
Clan
:
Thioredoxin
(367)
Family
:
Glutaredoxin
(22)
Schistosoma mansoni (Blood fluke)
(4)
3a
Glutaredoxin-2x8hA03
A:20-82
Clan
:
no clan defined [family: Pyr_redox_dim]
(44)
Family
:
Pyr_redox_dim
(44)
Schistosoma mansoni (Blood fluke)
(4)
4a
Pyr_redox_dim-2x8hA04
A:469-582
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Chain A
Asymmetric Unit 1
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