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2X7C
Biol. Unit 1
Info
Asym.Unit (260 KB)
Biol.Unit 1 (128 KB)
Biol.Unit 2 (130 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN KINESIN EG5 IN COMPLEX WITH (S)-ENASTRON
Authors
:
H. Y. K. Kaan, V. Ulaganathan, O. Rath, C. Laggner, H. Prokopcova, D. Dal C. O. Kappe, F. Kozielski
Date
:
26 Feb 10 (Deposition) - 14 Jul 10 (Release) - 21 Sep 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Microtubule, Atp-Binding, Motor Protein, Cell Division, Mitosis, Inhibitor, Cell Cycle, Nucleotide-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
H. Y. K. Kaan, V. Ulaganathan, O. Rath, H. Prokopcova, D. Dallinger, C. O. Kappe, F. Kozielski
Structural Basis For Inhibition Of Eg5 By Dihydropyrimidines: Stereoselectivity Of Antimitotic Inhibitors Enastron, Dimethylenastron And Fluorastrol.
J. Med. Chem. V. 53 5676 2010
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: (S)-4-(3-HYDROXYPHENYL)-2-THIOXO-1... (KZ9a)
2b: (S)-4-(3-HYDROXYPHENYL)-2-THIOXO-1... (KZ9b)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
KZ9
1
Ligand/Ion
(S)-4-(3-HYDROXYPHENYL)-2-THIOXO-1,2,3,4,7,8-HEXAHYDROQUINAZOLIN-5(6H)-ONE
3
MG
-1
Ligand/Ion
MAGNESIUM ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:24 , ARG A:26 , PRO A:27 , GLN A:106 , THR A:107 , GLY A:108 , THR A:109 , GLY A:110 , LYS A:111 , THR A:112 , PHE A:113 , GLU A:118 , MG A:701 , HOH A:2101 , HOH A:2252 , HOH A:2333 , HOH A:2335 , HOH A:2336 , HOH A:2337 , HOH A:2338 , HOH A:2339 , HOH A:2340 , HOH A:2341
BINDING SITE FOR RESIDUE ADP A 601
2
AC2
SOFTWARE
THR A:112 , ADP A:601 , HOH A:2228 , HOH A:2252 , HOH A:2335 , HOH A:2339
BINDING SITE FOR RESIDUE MG A 701
3
AC6
SOFTWARE
GLU A:116 , GLY A:117 , GLU A:118 , ARG A:119 , ASP A:130 , ALA A:133 , ILE A:136 , PRO A:137 , TYR A:211 , HOH A:2205
BINDING SITE FOR RESIDUE KZ9 A1365
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SAPs(SNPs)/Variants
(3, 3)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_067829 (F144L, chain A, )
2: VAR_067830 (R234C, chain A, )
3: VAR_067831 (S235C, chain A, )
View:
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_067829
F
144
L
KIF11_HUMAN
Disease (MCLMR)
---
A
F
144
L
2
UniProt
VAR_067830
R
234
C
KIF11_HUMAN
Disease (MCLMR)
---
A
R
234
C
3
UniProt
VAR_067831
S
235
C
KIF11_HUMAN
Disease (MCLMR)
---
A
S
235
C
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: KINESIN_MOTOR_2 (A:18-359)
2: KINESIN_MOTOR_1 (A:259-270)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
KINESIN_MOTOR_2
PS50067
Kinesin motor domain profile.
KIF11_HUMAN
18-359
1
A:18-359
-
2
KINESIN_MOTOR_1
PS00411
Kinesin motor domain signature.
KIF11_HUMAN
259-270
1
A:259-270
-
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2x7ca_ (A:)
1b: SCOP_d2x7cb_ (B:)
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Protein Domains
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Superfamily
:
P-loop containing nucleoside triphosphate hydrolases
(2083)
Family
:
Motor proteins
(119)
Protein domain
:
automated matches
(40)
Human (Homo sapiens) [TaxId: 9606]
(31)
1a
d2x7ca_
A:
1b
d2x7cb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2x7cA00 (A:18-364)
1b: CATH_2x7cB00 (B:17-366)
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Organisms
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(
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Kinesin
(69)
Homologous Superfamily
:
Kinesin
(69)
Human (Homo sapiens)
(36)
1a
2x7cA00
A:18-364
1b
2x7cB00
B:17-366
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Kinesin_2x7cB01 (B:24-359)
1b: PFAM_Kinesin_2x7cB02 (B:24-359)
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Clan
:
P-loop_NTPase
(1112)
Family
:
Kinesin
(42)
Homo sapiens (Human)
(23)
1a
Kinesin-2x7cB01
B:24-359
1b
Kinesin-2x7cB02
B:24-359
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Chain A
Asymmetric Unit 1
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Asym.Unit (260 KB)
Header - Asym.Unit
Biol.Unit 1 (128 KB)
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