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2X3F
Asym. Unit
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Asym.Unit (196 KB)
Biol.Unit 1 (189 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE METHICILLIN-RESISTANT STAPHYLOCOCCUS AUREUS SAR2676, A PANTOTHENATE SYNTHETASE.
Authors
:
M. Oke, L. G. Carter, K. A. Johnson, H. Liu, S. A. Mcmahon, M. F. White, J. H. Naismith
Date
:
24 Jan 10 (Deposition) - 21 Jul 10 (Release) - 21 Jul 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.95
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Ligase, Atp-Binding, Nucleotide-Binding, Pantothenate Biosynthesis
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Oke, L. G. Carter, K. A. Johnson, H. Liu, S. A. Mcmahon, X. Yan, M. Kerou, N. D. Weikart, N. Kadi, M. A. Sheikh, S. Schmelz, M. Dorward, M. Zawadzki, C. Cozens, H. Falconer, H. Powers, I. M. Overton, C. A. J. Van Niekerk, X. Peng, P. Patel, R. A. Garrett, D. Prangishvili C. H. Botting, P. J. Coote, D. T. F. Dryden, G. J. Barton, U. Schwarz-Linek, G. L. Challis, G. L. Taylor, M. F. White, J. H. Naismith
The Scottish Structural Proteomics Facility: Targets, Methods And Outputs.
J. Struct. Funct. Genom. V. 11 167 2010
(for further references see the
PDB file header
)
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: DIPHOSPHOMETHYLPHOSPHONIC ACID ADE... (APCa)
1b: DIPHOSPHOMETHYLPHOSPHONIC ACID ADE... (APCb)
2a: SULFATE ION (SO4a)
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No.
Name
Count
Type
Full Name
1
APC
2
Ligand/Ion
DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER
2
SO4
1
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO A:29 , THR A:30 , MET A:31 , HIS A:35 , HIS A:38 , MET A:41 , TYR A:72 , PHE A:147 , GLY A:148 , LYS A:150 , ASP A:151 , ASP A:175 , ILE A:176 , VAL A:177 , LYS A:185 , SER A:186 , SER A:187 , ARG A:188 , SO4 A:1284 , HOH A:2010
BINDING SITE FOR RESIDUE APC A1283
2
AC2
SOFTWARE
MET A:31 , GLN A:62 , ARG A:122 , HIS A:125 , ARG A:188 , APC A:1283 , HOH A:2048 , HOH A:2110
BINDING SITE FOR RESIDUE SO4 A1284
3
AC3
SOFTWARE
PRO B:29 , MET B:31 , HIS B:35 , HIS B:38 , MET B:41 , TYR B:72 , PHE B:147 , GLY B:148 , LYS B:150 , ASP B:151 , ASP B:175 , ILE B:176 , VAL B:177 , LYS B:185 , SER B:186 , SER B:187 , ARG B:188 , HOH B:2014 , HOH B:2087
BINDING SITE FOR RESIDUE APC B1283
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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Exons
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SCOP Domains
(1, 2)
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1a: SCOP_d2x3fa_ (A:)
1b: SCOP_d2x3fb_ (B:)
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Protein Domains
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(
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Adenine nucleotide alpha hydrolase-like
(440)
Superfamily
:
Nucleotidylyl transferase
(325)
Family
:
automated matches
(67)
Protein domain
:
automated matches
(67)
Staphylococcus aureus [TaxId: 282458]
(1)
1a
d2x3fa_
A:
1b
d2x3fb_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2x3fA02 (A:179-278)
1b: CATH_2x3fB02 (B:179-278)
2a: CATH_2x3fA01 (A:3-178)
2b: CATH_2x3fB01 (B:3-178)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Pantoate--beta-alanine Ligase; Chain: A,domain 2
(43)
Homologous Superfamily
:
[code=3.30.1300.10, no name defined]
(36)
Aureus (Staphylococcus aureus subsp)
(1)
1a
2x3fA02
A:179-278
1b
2x3fB02
B:179-278
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Tyrosyl-Transfer RNA Synthetase , subunit E, domain 1
(328)
Aureus (Staphylococcus aureus subsp)
(1)
2a
2x3fA01
A:3-178
2b
2x3fB01
B:3-178
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Pantoate_ligase_2x3fB01 (B:2-280)
1b: PFAM_Pantoate_ligase_2x3fB02 (B:2-280)
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Clan
:
HUP
(230)
Family
:
Pantoate_ligase
(16)
Staphylococcus aureus (strain MRSA252)
(1)
1a
Pantoate_ligase-2x3fB01
B:2-280
1b
Pantoate_ligase-2x3fB02
B:2-280
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Asymmetric Unit 1
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