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2X2C
Asym. Unit
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Asym.Unit (160 KB)
Biol.Unit 1 (290 KB)
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(1)
Title
:
ACETYL-CYPA:CYCLOSPORINE COMPLEX
Authors
:
M. Lammers, H. Neumann, J. W. Chin, L. C. James
Date
:
12 Jan 10 (Deposition) - 23 Mar 10 (Release) - 26 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.41
Chains
:
Asym. Unit : B,F,K,L,M,O,P,Q,R,S
Biol. Unit 1: B,F,K,L,M,O,P,Q,R,S (2x)
Keywords
:
Isomerase-Immunosuppressant Complex, Cyclophilin-Cyclosporin Complex, Cyclosporin A, Immunosuppressant, Isomerase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Lammers, H. Neumann, J. W. Chin, L. C. James
Acetylation Regulates Cyclophilin A Catalysis, Immunosuppression And Hiv Isomerisation
Nat. Chem. Biol. V. 6 331 2010
[
close entry info
]
Hetero Components
(7, 50)
Info
All Hetero Components
1a: ALPHA-AMINOBUTYRIC ACID (ABAa)
1b: ALPHA-AMINOBUTYRIC ACID (ABAb)
1c: ALPHA-AMINOBUTYRIC ACID (ABAc)
1d: ALPHA-AMINOBUTYRIC ACID (ABAd)
1e: ALPHA-AMINOBUTYRIC ACID (ABAe)
2a: N(6)-ACETYLLYSINE (ALYa)
2b: N(6)-ACETYLLYSINE (ALYb)
2c: N(6)-ACETYLLYSINE (ALYc)
2d: N(6)-ACETYLLYSINE (ALYd)
2e: N(6)-ACETYLLYSINE (ALYe)
3a: 4-METHYL-4-[(E)-2-BUTENYL]-4,N-MET... (BMTa)
3b: 4-METHYL-4-[(E)-2-BUTENYL]-4,N-MET... (BMTb)
3c: 4-METHYL-4-[(E)-2-BUTENYL]-4,N-MET... (BMTc)
3d: 4-METHYL-4-[(E)-2-BUTENYL]-4,N-MET... (BMTd)
3e: 4-METHYL-4-[(E)-2-BUTENYL]-4,N-MET... (BMTe)
4a: D-ALANINE (DALa)
4b: D-ALANINE (DALb)
4c: D-ALANINE (DALc)
4d: D-ALANINE (DALd)
4e: D-ALANINE (DALe)
5a: N-METHYLLEUCINE (MLEa)
5b: N-METHYLLEUCINE (MLEb)
5c: N-METHYLLEUCINE (MLEc)
5d: N-METHYLLEUCINE (MLEd)
5e: N-METHYLLEUCINE (MLEe)
5f: N-METHYLLEUCINE (MLEf)
5g: N-METHYLLEUCINE (MLEg)
5h: N-METHYLLEUCINE (MLEh)
5i: N-METHYLLEUCINE (MLEi)
5j: N-METHYLLEUCINE (MLEj)
5k: N-METHYLLEUCINE (MLEk)
5l: N-METHYLLEUCINE (MLEl)
5m: N-METHYLLEUCINE (MLEm)
5n: N-METHYLLEUCINE (MLEn)
5o: N-METHYLLEUCINE (MLEo)
5p: N-METHYLLEUCINE (MLEp)
5q: N-METHYLLEUCINE (MLEq)
5r: N-METHYLLEUCINE (MLEr)
5s: N-METHYLLEUCINE (MLEs)
5t: N-METHYLLEUCINE (MLEt)
6a: N-METHYLVALINE (MVAa)
6b: N-METHYLVALINE (MVAb)
6c: N-METHYLVALINE (MVAc)
6d: N-METHYLVALINE (MVAd)
6e: N-METHYLVALINE (MVAe)
7a: SARCOSINE (SARa)
7b: SARCOSINE (SARb)
7c: SARCOSINE (SARc)
7d: SARCOSINE (SARd)
7e: SARCOSINE (SARe)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ABA
5
Mod. Amino Acid
ALPHA-AMINOBUTYRIC ACID
2
ALY
5
Mod. Amino Acid
N(6)-ACETYLLYSINE
3
BMT
5
Mod. Amino Acid
4-METHYL-4-[(E)-2-BUTENYL]-4,N-METHYL-THREONINE
4
DAL
5
Mod. Amino Acid
D-ALANINE
5
MLE
20
Mod. Amino Acid
N-METHYLLEUCINE
6
MVA
5
Mod. Amino Acid
N-METHYLVALINE
7
SAR
5
Mod. Amino Acid
SARCOSINE
[
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]
Sites
(5, 5)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HOH B:2001 , HOH B:2002 , HOH B:2003 , THR K:73 , GLU K:81 , ALA K:103 , HOH K:2020 , ABA L:6 , SAR L:7 , ARG M:55 , PHE M:60 , GLN M:63 , GLY M:72 , ALA M:101 , ASN M:102 , ALA M:103 , GLN M:111 , PHE M:113 , TRP M:121 , HIS M:126 , PRO O:30 , TYR O:79
BINDING SITE FOR CHAIN B OF CYCLOSPORIN A
2
AC2
SOFTWARE
HOH F:2001 , HOH F:2002 , MET K:1 , HOH K:2006 , THR O:73 , GLU O:81 , ALA O:103 , HOH O:2037 , ABA P:6 , SAR P:7 , MLE P:8 , ARG S:55 , PHE S:60 , GLN S:63 , GLY S:72 , ALA S:101 , ASN S:102 , ALA S:103 , GLN S:111 , PHE S:113 , TRP S:121 , HIS S:126
BINDING SITE FOR CHAIN F OF CYCLOSPORIN A
3
AC3
SOFTWARE
SAR B:7 , MLE B:8 , HOH B:2002 , ARG K:55 , PHE K:60 , GLN K:63 , GLY K:72 , ALA K:101 , ASN K:102 , ALA K:103 , GLN K:111 , PHE K:113 , TRP K:121 , HIS K:126 , HOH L:2001 , HOH L:2003 , HOH L:2005 , HOH L:2006 , HOH L:2007 , HOH L:2008 , HOH L:2009 , MET M:1 , PRO M:30 , THR M:73 , TYR M:79 , GLU M:81 , ALA M:103 , HOH M:2066 , HOH M:2067 , HOH M:2073 , HOH M:2103 , HOH M:2112
BINDING SITE FOR CHAIN L OF CYCLOSPORIN A
4
AC4
SOFTWARE
ABA F:6 , SAR F:7 , MLE F:8 , ARG O:55 , PHE O:60 , GLN O:63 , GLY O:72 , ALA O:101 , ASN O:102 , ALA O:103 , GLN O:111 , PHE O:113 , TRP O:121 , HIS O:126 , HOH P:2002 , PRO Q:30 , LYS Q:31 , THR S:73 , GLU S:81 , ALA S:103 , HOH S:2036
BINDING SITE FOR CHAIN P OF CYCLOSPORIN A
5
AC5
SOFTWARE
ARG Q:55 , PHE Q:60 , GLN Q:63 , GLY Q:72 , THR Q:73 , GLU Q:81 , ALA Q:101 , ASN Q:102 , ALA Q:103 , GLN Q:111 , PHE Q:113 , TRP Q:121 , HIS Q:126 , MET S:1
BINDING SITE FOR CHAIN R OF CYCLOSPORIN A
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 10)
Info
All PROSITE Patterns/Profiles
1: CSA_PPIASE_2 (K:7-163,M:7-163,O:7-163,Q:7-163,S:...)
2: CSA_PPIASE_1 (K:48-65,M:48-65,O:48-65,Q:48-65,S:...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CSA_PPIASE_2
PS50072
Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.
PPIA_HUMAN
7-163
5
K:7-163
M:7-163
O:7-163
Q:7-163
S:7-163
2
CSA_PPIASE_1
PS00170
Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.
PPIA_HUMAN
48-65
5
K:48-65
M:48-65
O:48-65
Q:48-65
S:48-65
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
Info
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(1, 5)
Info
all PFAM domains
1a: PFAM_Pro_isomerase_2x2cS01 (S:7-163)
1b: PFAM_Pro_isomerase_2x2cS02 (S:7-163)
1c: PFAM_Pro_isomerase_2x2cS03 (S:7-163)
1d: PFAM_Pro_isomerase_2x2cS04 (S:7-163)
1e: PFAM_Pro_isomerase_2x2cS05 (S:7-163)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Cyclophil-like
(65)
Family
:
Pro_isomerase
(53)
Homo sapiens (Human)
(42)
1a
Pro_isomerase-2x2cS01
S:7-163
1b
Pro_isomerase-2x2cS02
S:7-163
1c
Pro_isomerase-2x2cS03
S:7-163
1d
Pro_isomerase-2x2cS04
S:7-163
1e
Pro_isomerase-2x2cS05
S:7-163
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Chain S
Asymmetric Unit 1
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