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2X2A
Asym. Unit
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Asym.Unit (134 KB)
Biol.Unit 1 (127 KB)
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(1)
Title
:
FREE ACETYL-CYPA TRIGONAL FORM
Authors
:
M. Lammers, H. Neumann, J. W. Chin, L. C. James
Date
:
12 Jan 10 (Deposition) - 23 Mar 10 (Release) - 15 Jun 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Hiv-1, Isomerase, Host-Virus Interaction
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Lammers, H. Neumann, J. W. Chin, L. C. James
Acetylation Regulates Cyclophilin A Catalysis, Immunosuppression And Hiv Isomerization.
Nat. Chem. Biol. V. 6 331 2010
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: N(6)-ACETYLLYSINE (ALYa)
1b: N(6)-ACETYLLYSINE (ALYb)
2a: GLYCEROL (GOLa)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
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No.
Name
Count
Type
Full Name
1
ALY
2
Mod. Amino Acid
N(6)-ACETYLLYSINE
2
GOL
1
Ligand/Ion
GLYCEROL
3
SO4
2
Ligand/Ion
SULFATE ION
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ARG A:37 , GLU A:43 , TRP A:121 , HOH A:2073 , HOH A:2095 , HOH A:2292 , HOH A:2293 , TRP B:121
BINDING SITE FOR RESIDUE GOL A1166
2
AC2
SOFTWARE
ARG A:148 , ASN A:149 , HOH A:2294 , HOH A:2295 , HOH A:2296 , HOH A:2297 , HOH A:2298
BINDING SITE FOR RESIDUE SO4 A1167
3
AC3
SOFTWARE
SER B:147 , ARG B:148 , HOH B:2286 , HOH B:2287 , HOH B:2288
BINDING SITE FOR RESIDUE SO4 B1166
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(2, 4)
Info
All PROSITE Patterns/Profiles
1: CSA_PPIASE_2 (A:7-163,B:7-163)
2: CSA_PPIASE_1 (A:48-65,B:48-65)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CSA_PPIASE_2
PS50072
Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile.
PPIA_HUMAN
7-163
2
A:7-163
B:7-163
2
CSA_PPIASE_1
PS00170
Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature.
PPIA_HUMAN
48-65
2
A:48-65
B:48-65
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Exons
(0, 0)
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2x2aa_ (A:)
1b: SCOP_d2x2ab_ (B:)
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)
Protein Domains
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)
(
)
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)
(
)
Class
:
All beta proteins
(24004)
Fold
:
Cyclophilin-like
(169)
Superfamily
:
Cyclophilin-like
(169)
Family
:
Cyclophilin (peptidylprolyl isomerase)
(160)
Protein domain
:
Cyclophilin (eukaryotic)
(77)
Human (Homo sapiens), variant A [TaxId: 9606]
(58)
1a
d2x2aa_
A:
1b
d2x2ab_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Pro_isomerase_2x2aB01 (B:7-163)
1b: PFAM_Pro_isomerase_2x2aB02 (B:7-163)
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Clans
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(
)
Clan
:
Cyclophil-like
(65)
Family
:
Pro_isomerase
(53)
Homo sapiens (Human)
(42)
1a
Pro_isomerase-2x2aB01
B:7-163
1b
Pro_isomerase-2x2aB02
B:7-163
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Asymmetric Unit 1
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Asym.Unit (134 KB)
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