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Asym. Unit
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Asym.Unit (1.0 MB)
Biol.Unit 1 (264 KB)
Biol.Unit 2 (266 KB)
Biol.Unit 3 (263 KB)
Biol.Unit 4 (265 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN ANGIOTENSINOGEN COMPLEXED WITH RENIN
Authors
:
A. Zhou, Z. Wei, Y. Yan, R. W. Carrell, R. J. Read
Date
:
08 Dec 09 (Deposition) - 20 Oct 10 (Release) - 11 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.33
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H
Biol. Unit 1: E,F (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: A,B (1x)
Biol. Unit 4: G,H (1x)
Keywords
:
Hydrolase-Hormone Complex, Hydrolase Hormone Complex, Vasoconstrictor, Glycoprotein, Hypertension, Serpins, Zymogen, Hydrolase, Vasoactive
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Zhou, R. W. Carrell, M. P. Murphy, Z. Wei, Y. Yan, P. L. Stanley, P. E. Stein, F. B. Pipkin, R. J. Read
A Redox Switch In Angiotensinogen Modulates Angiotensin Release.
Nature V. 468 108 2010
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Hetero Components
(0, 0)
Info
All Hetero Components
View:
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Label:
Sorry, no Info available
[
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]
Sites
(0, 0)
Info
All Sites
View:
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Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(17, 68)
Info
(mutated residues are not available)
All SNPs/Variants
01: VAR_022933 (L10F, chain B/D/F/H, )
02: VAR_035088 (D33N, chain A/C/E/G, )
03: VAR_029166 (E65K, chain B/D/F/H, )
04: VAR_051939 (G81C, chain B/D/F/H, )
05: VAR_029171 (Q89K, chain A/C/E/G, )
06: VAR_035431 (T104M, chain B/D/F/H, )
07: VAR_020376 (G146R, chain A/C/E/G, )
08: VAR_035087 (R159K, chain A/C/E/G, )
09: VAR_007093 (T174M, chain B/D/F/H, )
10: VAR_007094 (T209I, chain B/D/F/H, )
11: VAR_007095 (L211R, chain B/D/F/H, )
12: VAR_029167 (M235I, chain B/D/F/H, )
13: VAR_007096 (M235T, chain B/D/F/H, )
14: VAR_007097 (Y248C, chain B/D/F/H, )
15: VAR_035432 (P302S, chain B/D/F/H, )
16: VAR_035433 (R342Q, chain B/D/F/H, )
17: VAR_014573 (L359M, chain B/D/F/H, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_022933
L
43
F
ANGT_HUMAN
Polymorphism
41271499
B/D/F/H
L
10
F
02
UniProt
VAR_035088
D
104
N
RENI_HUMAN
Disease (RTD)
---
A/C/E/G
D
33
N
03
UniProt
VAR_029166
E
98
K
ANGT_HUMAN
Polymorphism
11568032
B/D/F/H
E
65
K
04
UniProt
VAR_051939
G
114
C
ANGT_HUMAN
Polymorphism
2229389
B/D/F/H
G
81
C
05
UniProt
VAR_029171
Q
160
K
RENI_HUMAN
Polymorphism
11571083
A/C/E/G
Q
89
K
06
UniProt
VAR_035431
T
137
M
ANGT_HUMAN
Polymorphism
34829218
B/D/F/H
T
104
M
07
UniProt
VAR_020376
G
217
R
RENI_HUMAN
Polymorphism
11571117
A/C/E/G
G
146
R
08
UniProt
VAR_035087
R
230
K
RENI_HUMAN
Disease (RTD)
---
A/C/E/G
R
159
K
09
UniProt
VAR_007093
T
207
M
ANGT_HUMAN
Polymorphism
4762
B/D/F/H
T
174
M
10
UniProt
VAR_007094
T
242
I
ANGT_HUMAN
Unclassified
---
B/D/F/H
T
209
I
11
UniProt
VAR_007095
L
244
R
ANGT_HUMAN
Polymorphism
5041
B/D/F/H
L
211
R
12
UniProt
VAR_029167
M
268
I
ANGT_HUMAN
Polymorphism
11568053
B/D/F/H
M
235
I
13
UniProt
VAR_007096
M
268
T
ANGT_HUMAN
Polymorphism
699
B/D/F/H
M
235
T
14
UniProt
VAR_007097
Y
281
C
ANGT_HUMAN
Polymorphism
56073403
B/D/F/H
Y
248
C
15
UniProt
VAR_035432
P
335
S
ANGT_HUMAN
Polymorphism
17856352
B/D/F/H
P
302
S
16
UniProt
VAR_035433
R
375
Q
ANGT_HUMAN
Disease (RTD)
---
B/D/F/H
R
342
Q
17
UniProt
VAR_014573
L
392
M
ANGT_HUMAN
Polymorphism
1805090
B/D/F/H
L
359
M
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(3, 16)
Info
All PROSITE Patterns/Profiles
1: PEPTIDASE_A1 (A:15-330,C:15-330,E:15-330,G:15-33...)
2: ASP_PROTEASE (A:30-41,C:30-41,E:30-41,G:30-41|A:...)
3: SERPIN (B:421-431,D:421-431,F:421-431,H:42...)
;
View:
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Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PEPTIDASE_A1
PS51767
Peptidase family A1 domain profile.
RENI_HUMAN
86-403
4
A:15-330
C:15-330
E:15-330
G:15-330
2
ASP_PROTEASE
PS00141
Eukaryotic and viral aspartyl proteases active site.
RENI_HUMAN
101-112
289-300
8
A:30-41
C:30-41
E:30-41
G:30-41
A:216-227
C:216-227
E:216-227
G:216-227
3
SERPIN
PS00284
Serpins signature.
ANGT_HUMAN
454-464
4
B:421-431
D:421-431
F:421-431
H:421-431
[
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]
Exons
(13, 52)
Info
All Exons
Exon 1.2 (A:3-12 | C:3-12 | E:3-12 | G:3-12)
Exon 1.3 (A:13-54 | C:13-54 | E:13-54 | G:13...)
Exon 1.4 (A:54-93 | C:54-93 | E:54-93 | G:54...)
Exon 1.5 (A:94-159 | C:94-159 | E:94-159 | G...)
Exon 1.6 (A:159-162 | C:159-162 | E:159-162 ...)
Exon 1.7 (A:162-200 (gaps) | C:162-200 (gaps...)
Exon 1.8 (A:200-247 | C:200-247 | E:200-247 ...)
Exon 1.9 (A:248-280 | C:248-280 | E:248-280 ...)
Exon 1.10a (A:281-333 | C:281-333 | E:281-333 ...)
Exon 2.2a (B:3-253 (gaps) | D:3-253 (gaps) | ...)
Exon 2.3 (B:253-342 | D:253-342 | F:253-342 ...)
Exon 2.4 (B:342-390 | D:342-390 | F:342-390 ...)
Exon 2.5b (B:391-449 (gaps) | D:391-449 (gaps...)
View:
Select:
Label:
All Exon Boundaries
01: Boundary 1.1b/1.2
02: Boundary 1.2/1.3
03: Boundary 1.3/1.4
04: Boundary 1.4/1.5
05: Boundary 1.5/1.6
06: Boundary 1.6/1.7
07: Boundary 1.7/1.8
08: Boundary 1.8/1.9
09: Boundary 1.9/1.10a
10: Boundary 1.10a/-
11: Boundary 2.1/2.2a
12: Boundary 2.2a/2.3
13: Boundary 2.3/2.4
14: Boundary 2.4/2.5b
15: Boundary 2.5b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1b
ENST00000272190
1b
ENSE00001952423
chr1:
204135450-204135324
127
RENI_HUMAN
1-33
33
0
-
-
1.2
ENST00000272190
2
ENSE00000962217
chr1:
204131291-204131141
151
RENI_HUMAN
33-83
51
4
A:3-12
C:3-12
E:3-12
G:3-12
10
10
10
10
1.3
ENST00000272190
3
ENSE00000962218
chr1:
204130543-204130420
124
RENI_HUMAN
84-125
42
4
A:13-54
C:13-54
E:13-54
G:13-54
42
42
42
42
1.4
ENST00000272190
4
ENSE00001075102
chr1:
204129806-204129688
119
RENI_HUMAN
125-164
40
4
A:54-93
C:54-93
E:54-93
G:54-93
40
40
40
40
1.5
ENST00000272190
5
ENSE00001075100
chr1:
204128723-204128527
197
RENI_HUMAN
165-230
66
4
A:94-159
C:94-159
E:94-159
G:94-159
66
66
66
66
1.6
ENST00000272190
6
ENSE00001652153
chr1:
204126497-204126489
9
RENI_HUMAN
230-233
4
4
A:159-162
C:159-162
E:159-162
G:159-162
4
4
4
4
1.7
ENST00000272190
7
ENSE00000962221
chr1:
204125924-204125805
120
RENI_HUMAN
233-273
41
4
A:162-200 (gaps)
C:162-200 (gaps)
E:162-200 (gaps)
G:162-200 (gaps)
41
41
41
41
1.8
ENST00000272190
8
ENSE00001306111
chr1:
204125447-204125306
142
RENI_HUMAN
273-320
48
4
A:200-247
C:200-247
E:200-247
G:200-247
48
48
48
48
1.9
ENST00000272190
9
ENSE00000962223
chr1:
204125046-204124948
99
RENI_HUMAN
321-353
33
4
A:248-280
C:248-280
E:248-280
G:248-280
33
33
33
33
1.10a
ENST00000272190
10a
ENSE00001947658
chr1:
204124305-204123947
359
RENI_HUMAN
354-406
53
4
A:281-333
C:281-333
E:281-333
G:281-333
53
53
53
53
2.1
ENST00000366667
1
ENSE00001442280
chr1:
230850043-230849832
212
ANGT_HUMAN
-
0
0
-
-
2.2a
ENST00000366667
2a
ENSE00001442279
chr1:
230846599-230845741
859
ANGT_HUMAN
1-286
286
4
B:3-253 (gaps)
D:3-253 (gaps)
F:3-253 (gaps)
H:3-253 (gaps)
251
251
251
251
2.3
ENST00000366667
3
ENSE00000921429
chr1:
230841946-230841679
268
ANGT_HUMAN
286-375
90
4
B:253-342
D:253-342
F:253-342
H:253-342
90
90
90
90
2.4
ENST00000366667
4
ENSE00000921430
chr1:
230840083-230839939
145
ANGT_HUMAN
375-423
49
4
B:342-390
D:342-390
F:342-390
H:342-390
49
49
49
49
2.5b
ENST00000366667
5b
ENSE00001920401
chr1:
230839075-230838269
807
ANGT_HUMAN
424-485
62
4
B:391-449 (gaps)
D:391-449 (gaps)
F:391-449 (gaps)
H:391-449 (gaps)
59
59
59
59
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
[
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Pfam Domains
(2, 8)
Info
all PFAM domains
1a: PFAM_Asp_2x0bG01 (G:14-332)
1b: PFAM_Asp_2x0bG02 (G:14-332)
1c: PFAM_Asp_2x0bG03 (G:14-332)
1d: PFAM_Asp_2x0bG04 (G:14-332)
2a: PFAM_Serpin_2x0bH01 (H:76-448)
2b: PFAM_Serpin_2x0bH02 (H:76-448)
2c: PFAM_Serpin_2x0bH03 (H:76-448)
2d: PFAM_Serpin_2x0bH04 (H:76-448)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Peptidase_AA
(368)
Family
:
Asp
(155)
Homo sapiens (Human)
(116)
1a
Asp-2x0bG01
G:14-332
1b
Asp-2x0bG02
G:14-332
1c
Asp-2x0bG03
G:14-332
1d
Asp-2x0bG04
G:14-332
Clan
:
no clan defined [family: Serpin]
(63)
Family
:
Serpin
(63)
Homo sapiens (Human)
(41)
2a
Serpin-2x0bH01
H:76-448
2b
Serpin-2x0bH02
H:76-448
2c
Serpin-2x0bH03
H:76-448
2d
Serpin-2x0bH04
H:76-448
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Asym.Unit (1.0 MB)
Header - Asym.Unit
Biol.Unit 1 (264 KB)
Header - Biol.Unit 1
Biol.Unit 2 (266 KB)
Header - Biol.Unit 2
Biol.Unit 3 (263 KB)
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