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2X01
Asym. Unit
Info
Asym.Unit (179 KB)
Biol.Unit 1 (169 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE OXA-10 S67A MUTANT AT PH 7
Authors
:
L. Vercheval, F. Kerff, C. Bauvois, E. Sauvage, R. Guiet, M. Galleni, P.
Date
:
04 Dec 09 (Deposition) - 08 Dec 10 (Release) - 08 Dec 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.90
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Hydrolase, Antibiotic Resistance
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
L. Vercheval, F. Kerff, C. Bauvois, E. Sauvage, R. Guiet, F. Borel, J. L. Ferrer, P. Charlier, M. Galleni
Evidence Of Chloride Inhibition And Impact Of The Hydrophobic Core On The Lysine Carboxylated In Class D Beta-Lactamase
To Be Published
[
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Hetero Components
(4, 15)
Info
All Hetero Components
1a: DIMETHYL SULFOXIDE (DMSa)
1b: DIMETHYL SULFOXIDE (DMSb)
1c: DIMETHYL SULFOXIDE (DMSc)
1d: DIMETHYL SULFOXIDE (DMSd)
2a: LYSINE NZ-CARBOXYLIC ACID (KCXa)
2b: LYSINE NZ-CARBOXYLIC ACID (KCXb)
3a: TETRAETHYLENE GLYCOL (PG4a)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DMS
4
Ligand/Ion
DIMETHYL SULFOXIDE
2
KCX
2
Mod. Amino Acid
LYSINE NZ-CARBOXYLIC ACID
3
PG4
1
Ligand/Ion
TETRAETHYLENE GLYCOL
4
SO4
8
Ligand/Ion
SULFATE ION
[
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ALA A:67 , SER A:115 , LYS A:205 , THR A:206 , GLY A:207 , PHE A:208 , ARG A:250 , HOH A:2092 , HOH A:2113 , HOH A:2114
BINDING SITE FOR RESIDUE SO4 A1265
02
AC2
SOFTWARE
MET A:99 , LYS A:100 , SER A:147 , GLY A:148 , HOH A:2115 , HOH A:2116
BINDING SITE FOR RESIDUE SO4 A1266
03
AC3
SOFTWARE
TRP A:92 , GLY A:94 , GLU A:103 , HOH A:2042
BINDING SITE FOR RESIDUE SO4 A1267
04
AC4
SOFTWARE
HIS A:87 , VAL A:89 , TYR B:174 , THR B:230 , VAL B:232
BINDING SITE FOR RESIDUE SO4 A1268
05
AC5
SOFTWARE
LYS A:100 , GLN A:101 , GLU A:103 , ARG A:104 , HOH A:2040 , SER B:215
BINDING SITE FOR RESIDUE SO4 A1269
06
AC6
SOFTWARE
GLU A:129 , HOH A:2005
BINDING SITE FOR RESIDUE DMS A1270
07
AC7
SOFTWARE
TYR A:63 , LEU A:64 , ARG A:160 , PRO A:217 , VAL A:219
BINDING SITE FOR RESIDUE DMS A1271
08
AC8
SOFTWARE
LYS A:134 , LYS A:138 , LYS A:152
BINDING SITE FOR RESIDUE DMS A1272
09
AC9
SOFTWARE
ALA B:67 , SER B:115 , LYS B:205 , THR B:206 , GLY B:207 , PHE B:208 , ARG B:250 , HOH B:2016
BINDING SITE FOR RESIDUE SO4 B1265
10
BC1
SOFTWARE
THR A:107 , ARG A:109 , GLY A:110 , PRO B:198 , GLU B:199 , TYR B:200 , GLU B:227 , LYS B:228 , GLU B:229
BINDING SITE FOR RESIDUE SO4 B1266
11
BC2
SOFTWARE
PRO A:198 , GLU A:199 , LEU A:201 , GLU A:227 , THR B:107 , ARG B:109 , GLY B:110 , HOH B:2065
BINDING SITE FOR RESIDUE SO4 B1267
12
BC3
SOFTWARE
TYR B:63 , LEU B:64 , ARG B:160 , GLY B:218 , VAL B:219 , HOH B:2059
BINDING SITE FOR RESIDUE DMS B1268
13
BC4
SOFTWARE
THR B:23 , LEU B:43 , SER B:50 , ALA B:52 , GLU B:261
BINDING SITE FOR RESIDUE PG4 B1269
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: BETA_LACTAMASE_D (A:65-75,B:65-75)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BETA_LACTAMASE_D
PS00337
Beta-lactamase class-D active site.
BLO10_PSEAI
65-75
2
A:65-75
B:65-75
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2x01a_ (A:)
1b: SCOP_d2x01b_ (B:)
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Classes
(
)
(
)
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(
)
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(
)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
beta-lactamase/transpeptidase-like
(515)
Superfamily
:
beta-lactamase/transpeptidase-like
(515)
Family
:
beta-Lactamase/D-ala carboxypeptidase
(411)
Protein domain
:
Class D beta-lactamase
(32)
Pseudomonas aeruginosa, OXA-10 [TaxId: 287]
(25)
1a
d2x01a_
A:
1b
d2x01b_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (179 KB)
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