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Asym. Unit
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Asym.Unit (147 KB)
Biol.Unit 1 (140 KB)
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(1)
Title
:
THE CRYSTAL STRUCTURE OF THE MURINE CLASS IA PI 3-KINASE P110DELTA IN COMPLEX WITH ZSTK474.
Authors
:
A. Berndt, S. Miller, O. Williams, D. D. Lee, B. T. Houseman, J. I. Pacold F. Gorrec, W. -C. Hon, Y. Liu, C. Rommel, P. Gaillard, T. Ruckle, M. K. Sc K. M. Shokat, J. P. Shaw, R. L. Williams
Date
:
09 Nov 09 (Deposition) - 12 Jan 10 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Transferase, Phosphoprotein, Isoform-Specific Inhibitors, Cancer
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. Berndt, S. Miller, O. Williams, D. D. Lee, B. T. Houseman, J. I. Pacold, F. Gorrec, W. -C. Hon, Y. Liu, C. Rommel, P. Gaillard, T. Ruckle, M. K. Schwarz, K. M. Shokat, J. P. Shaw, R. L. Williams
The P110D Structure: Mechanisms For Selectivity And Potency Of New Pi(3)K Inhibitors
Nat. Chem. Biol. V. 6 117 2010
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Hetero Components
(1, 1)
Info
All Hetero Components
1a: 2-(DIFLUOROMETHYL)-1-(4,6-DIMORPHO... (ZS4a)
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No.
Name
Count
Type
Full Name
1
ZS4
1
Ligand/Ion
2-(DIFLUOROMETHYL)-1-(4,6-DIMORPHOLIN-4-YL-1,3,5-TRIAZIN-2-YL)-1H-BENZIMIDAZOLE
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Sites
(1, 1)
Info
All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
MET A:752 , PRO A:758 , ILE A:777 , LYS A:779 , ASP A:787 , TYR A:813 , ILE A:825 , GLU A:826 , VAL A:828 , THR A:833 , ILE A:910 , ASP A:911 , HOH A:2231
BINDING SITE FOR RESIDUE ZS4 A1500
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
(6, 6)
Info
All PROSITE Patterns/Profiles
1: PI3K_RBD (A:187-278)
2: PI3K_C2 (A:319-476)
3: PIK_HELICAL (A:510-674)
4: PI3_4_KINASE_3 (A:774-1024)
5: PI3_4_KINASE_1 (A:778-792)
6: PI3_4_KINASE_2 (A:878-898)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PI3K_RBD
PS51546
Phosphatidylinositol 3-kinase Ras-binding (PI3K RBD) domain profile.
PK3CD_MOUSE
187-278
1
A:187-278
2
PI3K_C2
PS51547
Phosphatidylinositol 3-kinase C2 (PI3K C2) domain profile.
PK3CD_MOUSE
319-476
1
A:319-476
3
PIK_HELICAL
PS51545
PIK helical domain profile.
PK3CD_MOUSE
496-673
1
A:510-674
4
PI3_4_KINASE_3
PS50290
Phosphatidylinositol 3- and 4-kinases family profile.
PK3CD_MOUSE
773-1023
1
A:774-1024
5
PI3_4_KINASE_1
PS00915
Phosphatidylinositol 3- and 4-kinases signature 1.
PK3CD_MOUSE
777-791
1
A:778-792
6
PI3_4_KINASE_2
PS00916
Phosphatidylinositol 3- and 4-kinases signature 2.
PK3CD_MOUSE
877-897
1
A:878-898
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
(4, 4)
Info
all PFAM domains
1a: PFAM_PI3K_C2_2wxlA01 (A:339-473)
2a: PFAM_PI3Ka_2wxlA02 (A:510-684)
3a: PFAM_PI3K_rbd_2wxlA03 (A:187-281)
4a: PFAM_PI3_PI4_kinase_2wxlA04 (A:773-991)
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Clans
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(
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Organisms
(
)
(
)
Clan
:
C2
(71)
Family
:
PI3K_C2
(34)
Mus musculus (Mouse)
(13)
1a
PI3K_C2-2wxlA01
A:339-473
Clan
:
TPR
(230)
Family
:
PI3Ka
(41)
Mus musculus (Mouse)
(13)
2a
PI3Ka-2wxlA02
A:510-684
Clan
:
Ubiquitin
(279)
Family
:
PI3K_rbd
(34)
Mus musculus (Mouse)
(13)
3a
PI3K_rbd-2wxlA03
A:187-281
Clan
:
no clan defined [family: PI3_PI4_kinase]
(40)
Family
:
PI3_PI4_kinase
(40)
Mus musculus (Mouse)
(13)
4a
PI3_PI4_kinase-2wxlA04
A:773-991
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Asym.Unit (147 KB)
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