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2WSS
Asym. Unit
Info
Asym.Unit (1.1 MB)
Biol.Unit 1 (580 KB)
Biol.Unit 2 (554 KB)
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(1)
Title
:
THE STRUCTURE OF THE MEMBRANE EXTRINSIC REGION OF BOVINE ATP SYNTHASE
Authors
:
D. M. Rees, A. G. W. Leslie, J. E. Walker
Date
:
09 Sep 09 (Deposition) - 17 Nov 09 (Release) - 26 Jan 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.20
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q,R,S,T,U,V,W,X,Z
Biol. Unit 1: A,B,C,D,E,F,G,H,I,S,T,U,V (1x)
Biol. Unit 2: J,K,L,M,N,O,P,Q,R,W,X,Z (1x)
Keywords
:
Hydrogen Ion Transport, Atp Synthesis, Phosphoprotein, Ubl Conjugation, Transit Peptide, Nucleotide-Binding, Acetylation, Atp-Binding, Ion Transport, Mitochondrion, Pyrrolidone Carboxylic Acid, Hydrolase, Transport
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. M. Rees, A. G. W. Leslie, J. E. Walker
The Structure Of The Membrane Extrinsic Region Of Bovine Atp Synthase
Proc. Natl. Acad. Sci. Usa V. 106 21597 2009
[
close entry info
]
Hetero Components
(4, 39)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
2a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
2b: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPb)
2c: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPc)
2d: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPd)
2e: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPe)
2f: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPf)
2g: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPg)
2h: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPh)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
3e: MAGNESIUM ION (MGe)
3f: MAGNESIUM ION (MGf)
3g: MAGNESIUM ION (MGg)
3h: MAGNESIUM ION (MGh)
3i: MAGNESIUM ION (MGi)
3j: MAGNESIUM ION (MGj)
4a: SELENOMETHIONINE (MSEa)
4b: SELENOMETHIONINE (MSEb)
4c: SELENOMETHIONINE (MSEc)
4d: SELENOMETHIONINE (MSEd)
4e: SELENOMETHIONINE (MSEe)
4f: SELENOMETHIONINE (MSEf)
4g: SELENOMETHIONINE (MSEg)
4h: SELENOMETHIONINE (MSEh)
4i: SELENOMETHIONINE (MSEi)
4j: SELENOMETHIONINE (MSEj)
4k: SELENOMETHIONINE (MSEk)
4l: SELENOMETHIONINE (MSEl)
4m: SELENOMETHIONINE (MSEm)
4n: SELENOMETHIONINE (MSEn)
4o: SELENOMETHIONINE (MSEo)
4p: SELENOMETHIONINE (MSEp)
4q: SELENOMETHIONINE (MSEq)
4r: SELENOMETHIONINE (MSEr)
4s: SELENOMETHIONINE (MSEs)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
ANP
8
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
3
MG
10
Ligand/Ion
MAGNESIUM ION
4
MSE
19
Mod. Amino Acid
SELENOMETHIONINE
[
close Hetero Component info
]
Sites
(20, 20)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:172 , THR A:173 , GLY A:174 , LYS A:175 , THR A:176 , SER A:177 , GLU A:328 , ARG A:362 , PRO A:363 , GLN A:430 , GLN A:432 , MG A:601 , TYR D:368
BINDING SITE FOR RESIDUE ANP A 600
02
AC2
SOFTWARE
THR A:176 , ASP A:269 , ANP A:600
BINDING SITE FOR RESIDUE MG A 601
03
AC3
SOFTWARE
ASP B:170 , GLN B:172 , THR B:173 , GLY B:174 , LYS B:175 , THR B:176 , SER B:177 , GLU B:328 , PHE B:357 , GLN B:430 , GLN B:432 , MG B:601 , ARG E:356 , ASP E:359
BINDING SITE FOR RESIDUE ANP B 600
04
AC4
SOFTWARE
THR B:176 , GLN B:208 , ASP B:269 , ANP B:600
BINDING SITE FOR RESIDUE MG B 601
05
AC5
SOFTWARE
ASP C:170 , ARG C:171 , GLN C:172 , THR C:173 , GLY C:174 , LYS C:175 , THR C:176 , SER C:177 , ARG C:362 , GLN C:430 , GLN C:432 , MG C:601 , TYR F:368
BINDING SITE FOR RESIDUE ANP C 600
06
AC6
SOFTWARE
THR C:176 , ASP C:269 , ANP C:600
BINDING SITE FOR RESIDUE MG C 601
07
AC7
SOFTWARE
ARG C:373 , GLY D:159 , GLY D:161 , LYS D:162 , THR D:163 , VAL D:164 , TYR D:345 , PHE D:418 , ALA D:421 , PHE D:424 , MG D:601
BINDING SITE FOR RESIDUE ADP D 600
08
AC8
SOFTWARE
THR D:163 , GLU D:188 , ARG D:189 , GLU D:192 , ADP D:600
BINDING SITE FOR RESIDUE MG D 601
09
AC9
SOFTWARE
SER B:344 , ARG B:373 , GLY F:159 , GLY F:161 , LYS F:162 , THR F:163 , VAL F:164 , GLU F:188 , ARG F:189 , TYR F:345 , PHE F:418 , PHE F:424 , MG F:601
BINDING SITE FOR RESIDUE ANP F 600
10
BC1
SOFTWARE
THR F:163 , GLU F:188 , ARG F:189 , ANP F:600
BINDING SITE FOR RESIDUE MG F 601
11
BC2
SOFTWARE
GLN J:172 , THR J:173 , GLY J:174 , LYS J:175 , THR J:176 , SER J:177 , PHE J:357 , ARG J:362 , GLN J:430 , GLN J:432 , MG J:601
BINDING SITE FOR RESIDUE ANP J 600
12
BC3
SOFTWARE
THR J:176 , ANP J:600
BINDING SITE FOR RESIDUE MG J 601
13
BC4
SOFTWARE
ASP K:170 , GLN K:172 , THR K:173 , GLY K:174 , LYS K:175 , THR K:176 , SER K:177 , GLU K:328 , PHE K:357 , ARG K:362 , GLN K:430 , GLN K:432 , MG K:601 , ARG N:356 , ASP N:359
BINDING SITE FOR RESIDUE ANP K 600
14
BC5
SOFTWARE
THR K:176 , GLN K:208 , ASP K:269 , ANP K:600
BINDING SITE FOR RESIDUE MG K 601
15
BC6
SOFTWARE
ARG L:171 , GLN L:172 , THR L:173 , GLY L:174 , LYS L:175 , THR L:176 , SER L:177 , GLU L:328 , PRO L:363 , GLN L:432 , MG L:601 , TYR O:368
BINDING SITE FOR RESIDUE ANP L 600
16
BC7
SOFTWARE
THR L:176 , ASP L:269 , ANP L:600
BINDING SITE FOR RESIDUE MG L 601
17
BC8
SOFTWARE
SER L:372 , ARG L:373 , GLY M:159 , GLY M:161 , LYS M:162 , THR M:163 , VAL M:164 , TYR M:345 , PHE M:418 , ALA M:421 , PHE M:424 , THR M:425 , MG M:601
BINDING SITE FOR RESIDUE ADP M 600
18
BC9
SOFTWARE
THR M:163 , GLU M:188 , ARG M:189 , ADP M:600
BINDING SITE FOR RESIDUE MG M 601
19
CC1
SOFTWARE
SER K:344 , ARG K:373 , GLY O:157 , ALA O:158 , GLY O:159 , VAL O:160 , GLY O:161 , LYS O:162 , THR O:163 , VAL O:164 , GLU O:188 , ARG O:189 , TYR O:345 , PHE O:418 , PHE O:424 , MG O:601
BINDING SITE FOR RESIDUE ANP O 600
20
CC2
SOFTWARE
THR O:163 , GLU O:188 , ARG O:189 , ANP O:600
BINDING SITE FOR RESIDUE MG O 601
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(2, 14)
Info
All PROSITE Patterns/Profiles
1: ATPASE_GAMMA (G:258-271,P:258-271)
2: ATPASE_ALPHA_BETA (D:346-355,E:346-355,F:346-355,M:34...)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ATPASE_GAMMA
PS00153
ATP synthase gamma subunit signature.
ATPG_BOVIN
283-296
2
G:258-271
P:258-271
2
ATPASE_ALPHA_BETA
PS00152
ATP synthase alpha and beta subunits signature.
ATPB_BOVIN
396-405
6
D:346-355
E:346-355
F:346-355
M:346-355
N:346-355
O:346-355
ATPA_BOVIN
406-415
6
A:363-372
B:363-372
C:363-372
J:363-372
K:363-372
L:363-372
[
close PROSITE info
]
Exons
(37, 104)
Info
All Exons
Exon 1.1 (H:15-26 | Q:15-26)
Exon 1.2 (H:27-78 | Q:27-78)
Exon 1.3 (H:78-107 | Q:78-107)
Exon 1.4 (H:108-145 | Q:108-145)
Exon 2.5 (T:122-129 | -)
Exon 2.6 (T:130-189 | X:161-186)
Exon 2.7 (T:190-207 | X:193-207)
Exon 3.2 (D:9-63 | E:9-63 | F:9-63 | M:9-63 ...)
Exon 3.3 (D:63-121 | E:63-121 | F:63-121 | M...)
Exon 3.4 (D:121-162 | E:121-162 | F:121-162 ...)
Exon 3.5 (D:162-223 | E:162-223 | F:162-223 ...)
Exon 3.6 (D:224-276 | E:224-276 | F:224-276 ...)
Exon 3.7 (D:277-317 | E:277-317 | F:277-317 ...)
Exon 3.8 (D:318-388 | E:318-388 | F:318-388 ...)
Exon 3.9 (D:389-456 | E:389-456 | F:389-456 ...)
Exon 3.10 (D:456-475 | E:456-474 | F:456-474 ...)
Exon 4.2 (G:1-6 | P:1-6)
Exon 4.3 (G:6-50 | P:6-50)
Exon 4.4 (G:50-118 (gaps) | P:50-118 (gaps))
Exon 4.5 (G:118-166 | P:118-166)
Exon 4.6 (G:166-188 | P:166-188)
Exon 4.7 (G:188-240 | P:188-240)
Exon 4.8 (G:240-272 | P:240-272)
Exon 4.9 (G:272-272 | P:272-272)
Exon 5.2 (S:1-6 | W:1-6)
Exon 5.3 (S:7-43 | W:7-43)
Exon 5.4 (S:44-87 | W:44-87)
Exon 5.5 (S:87-124 | W:87-124)
Exon 5.6 (S:125-146 | W:125-146)
Exon 5.7 (S:169-189 | -)
Exon 6.2 (U:30-40)
Exon 6.3 (U:40-72 (gaps))
Exon 6.4 (U:73-91 (gaps))
Exon 7.2 (V:5-24 | Z:17-24)
Exon 7.3 (V:24-66 | Z:24-48 (gaps))
Exon 7.4 (V:66-70 | -)
Exon 8.1 (I:1-47 | R:1-47)
View:
Select:
Label:
All Exon Boundaries
01: Boundary -/1.1
02: Boundary 1.1/1.2
03: Boundary 1.2/1.3
04: Boundary 1.3/1.4
05: Boundary 1.4/-
06: Boundary 2.4/2.5
07: Boundary 2.5/2.6
08: Boundary 2.6/2.7
09: Boundary 2.7/-
10: Boundary 3.1/3.2
11: Boundary 3.2/3.3
12: Boundary 3.3/3.4
13: Boundary 3.4/3.5
14: Boundary 3.5/3.6
15: Boundary 3.6/3.7
16: Boundary 3.7/3.8
17: Boundary 3.8/3.9
18: Boundary 3.9/3.10
19: Boundary 3.10/-
20: Boundary 4.1/4.2
21: Boundary 4.2/4.3
22: Boundary 4.3/4.4
23: Boundary 4.4/4.5
24: Boundary 4.5/4.6
25: Boundary 4.6/4.7
26: Boundary 4.7/4.8
27: Boundary 4.8/4.9
28: Boundary 4.9/4.10
29: Boundary 5.1/5.2
30: Boundary 5.2/5.3
31: Boundary 5.3/5.4
32: Boundary 5.4/5.5
33: Boundary 5.5/5.6
34: Boundary 5.6/5.7
35: Boundary 5.7/-
36: Boundary 6.1/6.2
37: Boundary 6.2/6.3
38: Boundary 6.3/6.4
39: Boundary 6.4/6.5
40: Boundary 7.1/7.2
41: Boundary 7.2/7.3
42: Boundary 7.3/7.4
43: Boundary 7.4/-
44: Boundary -/8.1
45: Boundary 8.1/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000000721
1
ENSBTAE00000005335
chr7:
42707782-42707968
187
ATPD_BOVIN
1-48
48
2
H:15-26
Q:15-26
12
12
1.2
ENSBTAT00000000721
2
ENSBTAE00000005337
chr7:
42708593-42708746
154
ATPD_BOVIN
49-100
52
2
H:27-78
Q:27-78
52
52
1.3
ENSBTAT00000000721
3
ENSBTAE00000005339
chr7:
42709233-42709321
89
ATPD_BOVIN
100-129
30
2
H:78-107
Q:78-107
30
30
1.4
ENSBTAT00000000721
4
ENSBTAE00000278497
chr7:
42709412-42709954
543
ATPD_BOVIN
130-169
40
2
H:108-145
Q:108-145
38
38
2.1
ENSBTAT00000008447
1
ENSBTAE00000366545
chr3:
34439903-34439828
76
AT5F1_BOVIN
1-14
14
0
-
-
2.2
ENSBTAT00000008447
2
ENSBTAE00000387804
chr3:
34439648-34439612
37
AT5F1_BOVIN
14-26
13
0
-
-
2.3
ENSBTAT00000008447
3
ENSBTAE00000428584
chr3:
34433047-34432902
146
AT5F1_BOVIN
26-75
50
0
-
-
2.4
ENSBTAT00000008447
4
ENSBTAE00000068331
chr3:
34429919-34429756
164
AT5F1_BOVIN
75-129
55
0
-
-
2.5
ENSBTAT00000008447
5
ENSBTAE00000068333
chr3:
34429411-34429286
126
AT5F1_BOVIN
130-171
42
1
T:122-129
-
8
-
2.6
ENSBTAT00000008447
6
ENSBTAE00000068340
chr3:
34425878-34425699
180
AT5F1_BOVIN
172-231
60
2
T:130-189
X:161-186
60
26
2.7
ENSBTAT00000008447
7
ENSBTAE00000068343
chr3:
34423268-34422853
416
AT5F1_BOVIN
232-256
25
2
T:190-207
X:193-207
18
15
3.1
ENSBTAT00000017710
1
ENSBTAE00000144098
chr5:
61355655-61355808
154
ATPB_BOVIN
1-52
52
0
-
-
3.2
ENSBTAT00000017710
2
ENSBTAE00000144099
chr5:
61356274-61356456
183
ATPB_BOVIN
52-113
62
6
D:9-63
E:9-63
F:9-63
M:9-63
N:9-63
O:9-63
55
55
55
55
55
55
3.3
ENSBTAT00000017710
3
ENSBTAE00000144101
chr5:
61356699-61356873
175
ATPB_BOVIN
113-171
59
6
D:63-121
E:63-121
F:63-121
M:63-121
N:63-121
O:63-121
59
59
59
59
59
59
3.4
ENSBTAT00000017710
4
ENSBTAE00000144103
chr5:
61357390-61357511
122
ATPB_BOVIN
171-212
42
6
D:121-162
E:121-162
F:121-162
M:121-162
N:121-162
O:121-162
42
42
42
42
42
42
3.5
ENSBTAT00000017710
5
ENSBTAE00000144107
chr5:
61357757-61357941
185
ATPB_BOVIN
212-273
62
6
D:162-223
E:162-223
F:162-223
M:162-223
N:162-223
O:162-223
62
62
62
62
62
62
3.6
ENSBTAT00000017710
6
ENSBTAE00000144109
chr5:
61358444-61358602
159
ATPB_BOVIN
274-326
53
6
D:224-276
E:224-276
F:224-276
M:224-276
N:224-276
O:224-276
53
53
53
53
53
53
3.7
ENSBTAT00000017710
7
ENSBTAE00000144110
chr5:
61358693-61358815
123
ATPB_BOVIN
327-367
41
6
D:277-317
E:277-317
F:277-317
M:277-317
N:277-317
O:277-317
41
41
41
41
41
41
3.8
ENSBTAT00000017710
8
ENSBTAE00000144111
chr5:
61359431-61359643
213
ATPB_BOVIN
368-438
71
6
D:318-388
E:318-388
F:318-388
M:318-388
N:318-388
O:318-388
71
71
71
71
71
71
3.9
ENSBTAT00000017710
9
ENSBTAE00000144114
chr5:
61360024-61360225
202
ATPB_BOVIN
439-506
68
6
D:389-456
E:389-456
F:389-456
M:389-456
N:389-456
O:389-456
68
68
68
68
68
68
3.10
ENSBTAT00000017710
10
ENSBTAE00000297207
chr5:
61360774-61361036
263
ATPB_BOVIN
506-537
32
6
D:456-475
E:456-474
F:456-474
M:456-475
N:456-474
O:456-474
20
19
19
20
19
19
4.1
ENSBTAT00000018505
1
ENSBTAE00000150694
chr13:
14893326-14893240
87
ATPG_BOVIN
1-19
19
0
-
-
4.2
ENSBTAT00000018505
2
ENSBTAE00000150697
chr13:
14886562-14886528
35
ATPG_BOVIN
19-31
13
2
G:1-6
P:1-6
6
6
4.3
ENSBTAT00000018505
3
ENSBTAE00000150700
chr13:
14886029-14885898
132
ATPG_BOVIN
31-75
45
2
G:6-50
P:6-50
45
45
4.4
ENSBTAT00000018505
4
ENSBTAE00000150704
chr13:
14882864-14882660
205
ATPG_BOVIN
75-143
69
2
G:50-118 (gaps)
P:50-118 (gaps)
69
69
4.5
ENSBTAT00000018505
5
ENSBTAE00000150705
chr13:
14882083-14881940
144
ATPG_BOVIN
143-191
49
2
G:118-166
P:118-166
49
49
4.6
ENSBTAT00000018505
6
ENSBTAE00000150706
chr13:
14881819-14881755
65
ATPG_BOVIN
191-213
23
2
G:166-188
P:166-188
23
23
4.7
ENSBTAT00000018505
7
ENSBTAE00000150707
chr13:
14880753-14880598
156
ATPG_BOVIN
213-265
53
2
G:188-240
P:188-240
53
53
4.8
ENSBTAT00000018505
8
ENSBTAE00000150708
chr13:
14880202-14880106
97
ATPG_BOVIN
265-297
33
2
G:240-272
P:240-272
33
33
4.9
ENSBTAT00000018505
9
ENSBTAE00000305670
chr13:
14877783-14877747
37
ATPG_BOVIN
297-298
2
2
G:272-272
P:272-272
1
1
4.10
ENSBTAT00000018505
10
ENSBTAE00000305668
chr13:
14877118-14876979
140
ATPG_BOVIN
-
0
0
-
-
5.1
ENSBTAT00000024326
1
ENSBTAE00000197898
chr1:
720699-720764
66
ATPO_BOVIN
1-12
12
0
-
-
5.2
ENSBTAT00000024326
2
ENSBTAE00000401349
chr1:
722101-722151
51
ATPO_BOVIN
13-29
17
2
S:1-6
W:1-6
6
6
5.3
ENSBTAT00000024326
3
ENSBTAE00000197900
chr1:
723098-723208
111
ATPO_BOVIN
30-66
37
2
S:7-43
W:7-43
37
37
5.4
ENSBTAT00000024326
4
ENSBTAE00000197901
chr1:
725362-725491
130
ATPO_BOVIN
67-110
44
2
S:44-87
W:44-87
44
44
5.5
ENSBTAT00000024326
5
ENSBTAE00000197902
chr1:
726174-726286
113
ATPO_BOVIN
110-147
38
2
S:87-124
W:87-124
38
38
5.6
ENSBTAT00000024326
6
ENSBTAE00000398411
chr1:
727512-727598
87
ATPO_BOVIN
148-176
29
2
S:125-146
W:125-146
22
22
5.7
ENSBTAT00000024326
7
ENSBTAE00000197904
chr1:
727876-728057
182
ATPO_BOVIN
177-213
37
1
S:169-189
-
21
-
6.1
ENSBTAT00000028282
1
ENSBTAE00000295799
chr19:
58014852-58014901
50
ATP5H_BOVIN
-
0
0
-
-
6.2
ENSBTAT00000028282
2
ENSBTAE00000231040
chr19:
58016320-58016449
130
ATP5H_BOVIN
1-41
41
1
U:30-40
11
6.3
ENSBTAT00000028282
3
ENSBTAE00000231042
chr19:
58016723-58016819
97
ATP5H_BOVIN
41-73
33
1
U:40-72 (gaps)
33
6.4
ENSBTAT00000028282
4
ENSBTAE00000231043
chr19:
58018243-58018314
72
ATP5H_BOVIN
74-97
24
1
U:73-91 (gaps)
19
6.5
ENSBTAT00000028282
5
ENSBTAE00000231044
chr19:
58019205-58019267
63
ATP5H_BOVIN
98-118
21
0
-
-
6.6
ENSBTAT00000028282
6
ENSBTAE00000231046
chr19:
58019418-58019617
200
ATP5H_BOVIN
119-161
43
0
-
-
7.1
ENSBTAT00000032427
1
ENSBTAE00000259413
chr1:
10042456-10042499
44
ATP5J_BOVIN
-
0
0
-
-
7.2
ENSBTAT00000032427
2
ENSBTAE00000006048
chr1:
10045981-10046151
171
ATP5J_BOVIN
1-55
55
2
V:5-24
Z:17-24
20
8
7.3
ENSBTAT00000032427
3
ENSBTAE00000006056
chr1:
10048867-10048991
125
ATP5J_BOVIN
55-97
43
2
V:24-66
Z:24-48 (gaps)
43
25
7.4
ENSBTAT00000032427
4
ENSBTAE00000006057
chr1:
10049596-10049771
176
ATP5J_BOVIN
97-108
12
1
V:66-70
-
5
-
8.1
ENSBTAT00000035337
1
ENSBTAE00000417791
chr22:
35979709-35980100
392
ATP5E_BOVIN
1-77
77
2
I:1-47
R:1-47
47
47
[
close EXON info
]
SCOP Domains
(0, 0)
Info
All SCOP Domains
View:
Select:
Label:
Sorry, no Info available
[
close SCOP info
]
CATH Domains
(8, 42)
Info
all CATH domains
1a: CATH_2wssG02 (G:26-231)
1b: CATH_2wssP02 (P:26-231)
2a: CATH_2wssD02 (D:82-357)
2b: CATH_2wssA02 (A:94-379)
2c: CATH_2wssB02 (B:94-379)
2d: CATH_2wssC02 (C:94-379)
2e: CATH_2wssJ02 (J:94-379)
2f: CATH_2wssK02 (K:94-379)
2g: CATH_2wssL02 (L:94-379)
2h: CATH_2wssE02 (E:82-357)
2i: CATH_2wssF02 (F:82-357)
2j: CATH_2wssM02 (M:82-357)
2k: CATH_2wssN02 (N:82-357)
2l: CATH_2wssO02 (O:82-357)
3a: CATH_2wssI00 (I:1-47)
3b: CATH_2wssR00 (R:1-47)
4a: CATH_2wssE03 (E:358-474)
4b: CATH_2wssF03 (F:358-474)
4c: CATH_2wssN03 (N:358-474)
4d: CATH_2wssO03 (O:358-474)
4e: CATH_2wssD03 (D:358-475)
4f: CATH_2wssM03 (M:358-475)
5a: CATH_2wssG01 (G:1-25,G:232-272)
5b: CATH_2wssP01 (P:1-25,P:232-272)
6a: CATH_2wssA03 (A:380-510)
6b: CATH_2wssC03 (C:380-510)
6c: CATH_2wssJ03 (J:380-510)
6d: CATH_2wssL03 (L:380-510)
6e: CATH_2wssB03 (B:380-509)
6f: CATH_2wssK03 (K:380-509)
7a: CATH_2wssB01 (B:24-93)
7b: CATH_2wssJ01 (J:24-93)
7c: CATH_2wssK01 (K:24-93)
7d: CATH_2wssC01 (C:27-93)
7e: CATH_2wssL01 (L:30-93)
7f: CATH_2wssA01 (A:1-93)
8a: CATH_2wssD01 (D:9-81)
8b: CATH_2wssE01 (E:9-81)
8c: CATH_2wssF01 (F:9-81)
8d: CATH_2wssM01 (M:9-81)
8e: CATH_2wssN01 (N:9-81)
8f: CATH_2wssO01 (O:9-81)
View:
Select:
Label:
Classes
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)
(
)
Architectures
(
)
(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Pyruvate Kinase; Chain: A, domain 1
(36)
Homologous Superfamily
:
[code=3.40.1380.10, no name defined]
(14)
Bovine (Bos taurus)
(12)
1a
2wssG02
G:26-231
1b
2wssP02
P:26-231
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Bovine (Bos taurus)
(17)
2a
2wssD02
D:82-357
2b
2wssA02
A:94-379
2c
2wssB02
B:94-379
2d
2wssC02
C:94-379
2e
2wssJ02
J:94-379
2f
2wssK02
K:94-379
2g
2wssL02
L:94-379
2h
2wssE02
E:82-357
2i
2wssF02
F:82-357
2j
2wssM02
M:82-357
2k
2wssN02
N:82-357
2l
2wssO02
O:82-357
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Atp Synthase Epsilon Chain; Chain: I;
(69)
Homologous Superfamily
:
[code=1.10.1620.20, no name defined]
(5)
Bovine (Bos taurus)
(4)
3a
2wssI00
I:1-47
3b
2wssR00
R:1-47
Topology
:
Bovine Mitochondrial F1-ATPase, ATP Synthase Beta Chain; Chain D, domain3
(32)
Homologous Superfamily
:
Bovine Mitochondrial F1-atpase; Atp Synthase Beta Chain; Chain D, domain 3
(32)
Bovine (Bos taurus)
(17)
4a
2wssE03
E:358-474
4b
2wssF03
F:358-474
4c
2wssN03
N:358-474
4d
2wssO03
O:358-474
4e
2wssD03
D:358-475
4f
2wssM03
M:358-475
Topology
:
Helix Hairpins
(718)
Homologous Superfamily
:
[code=1.10.287.80, no name defined]
(43)
Bovine (Bos taurus)
(13)
5a
2wssG01
G:1-25,G:232-272
5b
2wssP01
P:1-25,P:232-272
Architecture
:
Up-down Bundle
(3216)
Topology
:
Lysin
(39)
Homologous Superfamily
:
[code=1.20.150.20, no name defined]
(33)
Bovine (Bos taurus)
(17)
6a
2wssA03
A:380-510
6b
2wssC03
C:380-510
6c
2wssJ03
J:380-510
6d
2wssL03
L:380-510
6e
2wssB03
B:380-509
6f
2wssK03
K:380-509
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Elongation Factor Tu (Ef-tu); domain 3
(323)
Homologous Superfamily
:
[code=2.40.30.20, no name defined]
(40)
Bovine (Bos taurus)
(17)
7a
2wssB01
B:24-93
7b
2wssJ01
J:24-93
7c
2wssK01
K:24-93
7d
2wssC01
C:27-93
7e
2wssL01
L:30-93
7f
2wssA01
A:1-93
Topology
:
Thrombin, subunit H
(1535)
Homologous Superfamily
:
[code=2.40.10.170, no name defined]
(33)
Bovine (Bos taurus)
(17)
8a
2wssD01
D:9-81
8b
2wssE01
E:9-81
8c
2wssF01
F:9-81
8d
2wssM01
M:9-81
8e
2wssN01
N:9-81
8f
2wssO01
O:9-81
[
close CATH info
]
Pfam Domains
(10, 49)
Info
all PFAM domains
01a: PFAM_Mt_ATP_synt_B_2wssX01 (X:161-202)
01b: PFAM_Mt_ATP_synt_B_2wssX02 (X:161-202)
02a: PFAM_OSCP_2wssW01 (W:14-146)
02b: PFAM_OSCP_2wssW02 (W:14-146)
03a: PFAM_ATP_synt_ab_N_2wssL01 (L:30-92)
03b: PFAM_ATP_synt_ab_N_2wssL02 (L:30-92)
03c: PFAM_ATP_synt_ab_N_2wssL03 (L:30-92)
03d: PFAM_ATP_synt_ab_N_2wssL04 (L:30-92)
03e: PFAM_ATP_synt_ab_N_2wssL05 (L:30-92)
03f: PFAM_ATP_synt_ab_N_2wssL06 (L:30-92)
03g: PFAM_ATP_synt_ab_N_2wssO01 (O:13-79)
03h: PFAM_ATP_synt_ab_N_2wssO02 (O:13-79)
03i: PFAM_ATP_synt_ab_N_2wssO03 (O:13-79)
03j: PFAM_ATP_synt_ab_N_2wssO04 (O:13-79)
03k: PFAM_ATP_synt_ab_N_2wssO05 (O:13-79)
03l: PFAM_ATP_synt_ab_N_2wssO06 (O:13-79)
04a: PFAM_ATP_synt_ab_2wssL07 (L:148-372)
04b: PFAM_ATP_synt_ab_2wssL08 (L:148-372)
04c: PFAM_ATP_synt_ab_2wssL09 (L:148-372)
04d: PFAM_ATP_synt_ab_2wssL10 (L:148-372)
04e: PFAM_ATP_synt_ab_2wssL11 (L:148-372)
04f: PFAM_ATP_synt_ab_2wssL12 (L:148-372)
04g: PFAM_ATP_synt_ab_2wssO07 (O:135-355)
04h: PFAM_ATP_synt_ab_2wssO08 (O:135-355)
04i: PFAM_ATP_synt_ab_2wssO09 (O:135-355)
04j: PFAM_ATP_synt_ab_2wssO10 (O:135-355)
04k: PFAM_ATP_synt_ab_2wssO11 (O:135-355)
04l: PFAM_ATP_synt_ab_2wssO12 (O:135-355)
05a: PFAM_ATP_synt_2wssP01 (P:1-272)
05b: PFAM_ATP_synt_2wssP02 (P:1-272)
06a: PFAM_ATP_synt_DE_N_2wssQ01 (Q:16-97)
06b: PFAM_ATP_synt_DE_N_2wssQ02 (Q:16-97)
07a: PFAM_ATP_synt_Eps_2wssR01 (R:2-47)
07b: PFAM_ATP_synt_Eps_2wssR02 (R:2-47)
08a: PFAM_ATP_synt_F6_2wssZ01 (Z:17-48)
08b: PFAM_ATP_synt_F6_2wssZ02 (Z:17-48)
09a: PFAM_ATP_synt_ab_C_2wssL13 (L:384-488)
09b: PFAM_ATP_synt_ab_C_2wssL14 (L:384-488)
09c: PFAM_ATP_synt_ab_C_2wssL15 (L:384-488)
09d: PFAM_ATP_synt_ab_C_2wssL16 (L:384-488)
09e: PFAM_ATP_synt_ab_C_2wssL17 (L:384-488)
09f: PFAM_ATP_synt_ab_C_2wssL18 (L:384-488)
09g: PFAM_ATP_synt_ab_C_2wssO13 (O:368-474)
09h: PFAM_ATP_synt_ab_C_2wssO14 (O:368-474)
09i: PFAM_ATP_synt_ab_C_2wssO15 (O:368-474)
09j: PFAM_ATP_synt_ab_C_2wssO16 (O:368-474)
09k: PFAM_ATP_synt_ab_C_2wssO17 (O:368-474)
09l: PFAM_ATP_synt_ab_C_2wssO18 (O:368-474)
10a: PFAM_Mt_ATP_synt_D_2wssU01 (U:30-91)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
ATP_synthase
(9)
Family
:
Mt_ATP-synt_B
(1)
Bos taurus (Bovine)
(1)
01a
Mt_ATP-synt_B-2wssX01
X:161-202
01b
Mt_ATP-synt_B-2wssX02
X:161-202
Family
:
OSCP
(2)
Bos taurus (Bovine)
(2)
02a
OSCP-2wssW01
W:14-146
02b
OSCP-2wssW02
W:14-146
Clan
:
HAS-barrel
(27)
Family
:
ATP-synt_ab_N
(27)
Bos taurus (Bovine)
(14)
03a
ATP-synt_ab_N-2wssL01
L:30-92
03b
ATP-synt_ab_N-2wssL02
L:30-92
03c
ATP-synt_ab_N-2wssL03
L:30-92
03d
ATP-synt_ab_N-2wssL04
L:30-92
03e
ATP-synt_ab_N-2wssL05
L:30-92
03f
ATP-synt_ab_N-2wssL06
L:30-92
03g
ATP-synt_ab_N-2wssO01
O:13-79
03h
ATP-synt_ab_N-2wssO02
O:13-79
03i
ATP-synt_ab_N-2wssO03
O:13-79
03j
ATP-synt_ab_N-2wssO04
O:13-79
03k
ATP-synt_ab_N-2wssO05
O:13-79
03l
ATP-synt_ab_N-2wssO06
O:13-79
Clan
:
P-loop_NTPase
(1112)
Family
:
ATP-synt_ab
(44)
Bos taurus (Bovine)
(14)
04a
ATP-synt_ab-2wssL07
L:148-372
04b
ATP-synt_ab-2wssL08
L:148-372
04c
ATP-synt_ab-2wssL09
L:148-372
04d
ATP-synt_ab-2wssL10
L:148-372
04e
ATP-synt_ab-2wssL11
L:148-372
04f
ATP-synt_ab-2wssL12
L:148-372
04g
ATP-synt_ab-2wssO07
O:135-355
04h
ATP-synt_ab-2wssO08
O:135-355
04i
ATP-synt_ab-2wssO09
O:135-355
04j
ATP-synt_ab-2wssO10
O:135-355
04k
ATP-synt_ab-2wssO11
O:135-355
04l
ATP-synt_ab-2wssO12
O:135-355
Clan
:
no clan defined [family: ATP-synt]
(22)
Family
:
ATP-synt
(22)
Bos taurus (Bovine)
(14)
05a
ATP-synt-2wssP01
P:1-272
05b
ATP-synt-2wssP02
P:1-272
Clan
:
no clan defined [family: ATP-synt_DE_N]
(15)
Family
:
ATP-synt_DE_N
(15)
Bos taurus (Bovine)
(6)
06a
ATP-synt_DE_N-2wssQ01
Q:16-97
06b
ATP-synt_DE_N-2wssQ02
Q:16-97
Clan
:
no clan defined [family: ATP-synt_Eps]
(11)
Family
:
ATP-synt_Eps
(11)
Bos taurus (Bovine)
(6)
07a
ATP-synt_Eps-2wssR01
R:2-47
07b
ATP-synt_Eps-2wssR02
R:2-47
Clan
:
no clan defined [family: ATP-synt_F6]
(1)
Family
:
ATP-synt_F6
(1)
Bos taurus (Bovine)
(1)
08a
ATP-synt_F6-2wssZ01
Z:17-48
08b
ATP-synt_F6-2wssZ02
Z:17-48
Clan
:
no clan defined [family: ATP-synt_ab_C]
(32)
Family
:
ATP-synt_ab_C
(32)
Bos taurus (Bovine)
(14)
09a
ATP-synt_ab_C-2wssL13
L:384-488
09b
ATP-synt_ab_C-2wssL14
L:384-488
09c
ATP-synt_ab_C-2wssL15
L:384-488
09d
ATP-synt_ab_C-2wssL16
L:384-488
09e
ATP-synt_ab_C-2wssL17
L:384-488
09f
ATP-synt_ab_C-2wssL18
L:384-488
09g
ATP-synt_ab_C-2wssO13
O:368-474
09h
ATP-synt_ab_C-2wssO14
O:368-474
09i
ATP-synt_ab_C-2wssO15
O:368-474
09j
ATP-synt_ab_C-2wssO16
O:368-474
09k
ATP-synt_ab_C-2wssO17
O:368-474
09l
ATP-synt_ab_C-2wssO18
O:368-474
Clan
:
no clan defined [family: Mt_ATP-synt_D]
(1)
Family
:
Mt_ATP-synt_D
(1)
Bos taurus (Bovine)
(1)
10a
Mt_ATP-synt_D-2wssU01
U:30-91
[
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