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2WSD
Asym. Unit
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Asym.Unit (105 KB)
Biol.Unit 1 (100 KB)
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(1)
Title
:
PROXIMAL MUTATIONS AT THE TYPE 1 CU SITE OF COTA-LACCASE: I494A MUTANT
Authors
:
C. S. Silva, P. Durao, Z. Chen, C. M. Soares, M. M. Pereira, S. Todorovic, P. Hildebrandt, L. O. Martins, P. F. Lindley, I. Bento
Date
:
04 Sep 09 (Deposition) - 29 Sep 10 (Release) - 29 Sep 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Oxidoreductase, Multi-Copper Oxidase, Sporulation, Cota- Laccase, T1 Copper Centre
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Durao, Z. Chen, C. S. Silva, C. M. Soares, M. M. Pereira, S. Todorovic P. Hildebrandt, I. Bento, P. F. Lindley, L. O. Martins
Proximal Mutations At The Type 1 Copper Site Of Cota Laccase: Spectroscopic, Redox, Kinetic And Structural Characterization Of I494A And L386A Mutants.
Biochem. J. V. 412 339 2008
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Hetero Components
(4, 18)
Info
All Hetero Components
1a: S-OXY CYSTEINE (CSXa)
2a: COPPER (II) ION (CUa)
2b: COPPER (II) ION (CUb)
2c: COPPER (II) ION (CUc)
2d: COPPER (II) ION (CUd)
3a: 1,2-ETHANEDIOL (EDOa)
3b: 1,2-ETHANEDIOL (EDOb)
3c: 1,2-ETHANEDIOL (EDOc)
3d: 1,2-ETHANEDIOL (EDOd)
3e: 1,2-ETHANEDIOL (EDOe)
3f: 1,2-ETHANEDIOL (EDOf)
3g: 1,2-ETHANEDIOL (EDOg)
3h: 1,2-ETHANEDIOL (EDOh)
3i: 1,2-ETHANEDIOL (EDOi)
3j: 1,2-ETHANEDIOL (EDOj)
3k: 1,2-ETHANEDIOL (EDOk)
3l: 1,2-ETHANEDIOL (EDOl)
4a: OXYGEN MOLECULE (OXYa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CSX
1
Mod. Amino Acid
S-OXY CYSTEINE
2
CU
4
Ligand/Ion
COPPER (II) ION
3
EDO
12
Ligand/Ion
1,2-ETHANEDIOL
4
OXY
1
Ligand/Ion
OXYGEN MOLECULE
[
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
HIS A:419 , CYS A:492 , HIS A:497 , MET A:502 , HOH A:2519
BINDING SITE FOR RESIDUE CU A 601
02
AC2
SOFTWARE
HIS A:107 , HIS A:153 , HIS A:493 , OXY A:605
BINDING SITE FOR RESIDUE CU A 602
03
AC3
SOFTWARE
HIS A:155 , HIS A:424 , HIS A:491 , CU A:604 , OXY A:605
BINDING SITE FOR RESIDUE CU A 603
04
AC4
SOFTWARE
HIS A:105 , HIS A:107 , HIS A:422 , HIS A:424 , CU A:603 , OXY A:605 , HOH A:2177
BINDING SITE FOR RESIDUE CU A 604
05
AC5
SOFTWARE
HIS A:105 , HIS A:107 , HIS A:153 , HIS A:155 , HIS A:422 , HIS A:424 , HIS A:491 , HIS A:493 , CU A:602 , CU A:603 , CU A:604
BINDING SITE FOR RESIDUE OXY A 605
06
AC6
SOFTWARE
ASP A:113 , TYR A:118 , TYR A:133 , LYS A:135 , HOH A:2593
BINDING SITE FOR RESIDUE EDO A 701
07
AC7
SOFTWARE
LYS A:25 , TYR A:69 , VAL A:138 , THR A:307 , ALA A:308 , TYR A:309 , GLU A:310 , HOH A:2594
BINDING SITE FOR RESIDUE EDO A 702
08
AC8
SOFTWARE
ASN A:74 , LEU A:76 , PRO A:77 , VAL A:100 , SER A:124 , LYS A:125 , HOH A:2595
BINDING SITE FOR RESIDUE EDO A 703
09
AC9
SOFTWARE
GLU A:188 , GLU A:244 , TYR A:250 , HOH A:2596
BINDING SITE FOR RESIDUE EDO A 704
10
BC1
SOFTWARE
ARG A:136 , GLU A:137 , VAL A:138 , PRO A:247 , HOH A:2597 , HOH A:2598
BINDING SITE FOR RESIDUE EDO A 705
11
BC2
SOFTWARE
ASP A:268 , ALA A:317 , PRO A:328 , ALA A:332 , ASN A:333 , HOH A:2599 , HOH A:2600
BINDING SITE FOR RESIDUE EDO A 706
12
BC3
SOFTWARE
LYS A:183 , LEU A:184 , SER A:186 , GLU A:348 , SER A:349 , HOH A:2601
BINDING SITE FOR RESIDUE EDO A 707
13
BC4
SOFTWARE
GLU A:61 , ILE A:173 , HIS A:175 , ASP A:190 , PRO A:192 , HOH A:2106 , HOH A:2298 , HOH A:2602 , HOH A:2603
BINDING SITE FOR RESIDUE EDO A 708
14
BC5
SOFTWARE
ASN A:269 , GLY A:271 , ASP A:272 , ASP A:305 , TYR A:309 , HOH A:2367
BINDING SITE FOR RESIDUE EDO A 709
15
BC6
SOFTWARE
VAL A:426 , SER A:427 , THR A:480 , GLY A:482 , HOH A:2253 , HOH A:2573 , HOH A:2605 , HOH A:2606 , HOH A:2607
BINDING SITE FOR RESIDUE EDO A 710
16
BC7
SOFTWARE
THR A:130 , GLY A:131 , PHE A:134 , HOH A:2608 , HOH A:2609
BINDING SITE FOR RESIDUE EDO A 711
17
BC8
SOFTWARE
SER A:186 , TYR A:189 , ARG A:248 , LYS A:346 , GLU A:348 , HOH A:2601
BINDING SITE FOR RESIDUE EDO A 712
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
Sorry, no Info available
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2wsda1 (A:2-182)
1b: SCOP_d2wsda2 (A:183-356)
1c: SCOP_d2wsda3 (A:357-512)
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Class
:
All beta proteins
(24004)
Fold
:
Cupredoxin-like
(545)
Superfamily
:
Cupredoxins
(543)
Family
:
automated matches
(57)
Protein domain
:
automated matches
(57)
Bacillus subtilis [TaxId: 1423]
(7)
1a
d2wsda1
A:2-182
1b
d2wsda2
A:183-356
1c
d2wsda3
A:357-512
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(3, 4)
Info
all PFAM domains
1a: PFAM_Cu_oxidase_2wsdA01 (A:175-340)
2a: PFAM_Cu_oxidase_2_2wsdA02 (A:358-512)
3a: PFAM_Cu_oxidase_3_2wsdA03 (A:96-179)
3b: PFAM_Cu_oxidase_3_2wsdA04 (A:96-179)
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Clan
:
CU_oxidase
(192)
Family
:
Cu-oxidase
(74)
Bacillus subtilis
(7)
1a
Cu-oxidase-2wsdA01
A:175-340
Family
:
Cu-oxidase_2
(24)
Bacillus subtilis
(7)
2a
Cu-oxidase_2-2wsdA02
A:358-512
Family
:
Cu-oxidase_3
(79)
Bacillus subtilis
(7)
3a
Cu-oxidase_3-2wsdA03
A:96-179
3b
Cu-oxidase_3-2wsdA04
A:96-179
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Chain A
Asymmetric Unit 1
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