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Biol. Unit 1
Info
Asym.Unit (105 KB)
Biol.Unit 1 (51 KB)
Biol.Unit 2 (51 KB)
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(1)
Title
:
INLB321_4R: S199R, D200R, G206R, A227R, C242A MUTANT OF THE LISTERIA MONOCYTOGENES INLB INTERNALIN DOMAIN
Authors
:
H. H. Niemann, D. M. Ferraris, D. W. Heinz
Date
:
27 Aug 09 (Deposition) - 10 Nov 09 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.03
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Hgf Receptor Ligand, Leucine-Rich Repeat, Leucine Rich Repeat, Lrr, C-Met Ligand, Cell Invasion, Virulence Factor
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
D. M. Ferraris, E. Gherardi, Y. Di, D. W. Heinz, H. H. Niemann
Ligand-Mediated Dimerization Of The Met Receptor Tyrosine Kinase By The Bacterial Invasion Protein Inlb.
J. Mol. Biol. V. 395 522 2010
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Hetero Components
(0, 0)
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Sites
(0, 0)
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 6)
Info
All PROSITE Patterns/Profiles
1: LRR (A:99-120,A:121-142,A:143-164,A:165...)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
LRR
PS51450
Leucine-rich repeat profile.
INLB_LISMO
99-120
121-142
143-164
165-186
187-208
209-230
6
A:99-120
-
A:121-142
-
A:143-164
-
A:165-186
-
A:187-208
-
A:209-230
-
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2wqxa2 (A:241-321)
1b: SCOP_d2wqxb2 (B:241-321)
2a: SCOP_d2wqxa1 (A:36-240)
2b: SCOP_d2wqxb1 (B:36-240)
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Protein Domains
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Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
E set domains
(509)
Family
:
automated matches
(93)
Protein domain
:
automated matches
(93)
Listeria monocytogenes [TaxId: 169963]
(7)
1a
d2wqxa2
A:241-321
1b
d2wqxb2
B:241-321
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
(112)
Superfamily
:
L domain-like
(93)
Family
:
Internalin LRR domain
(22)
Protein domain
:
automated matches
(5)
Listeria monocytogenes [TaxId: 169963]
(5)
2a
d2wqxa1
A:36-240
2b
d2wqxb1
B:36-240
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2wqxA01 (A:36-245)
1b: CATH_2wqxB01 (B:36-245)
2a: CATH_2wqxA02 (A:246-321)
2b: CATH_2wqxB02 (B:246-321)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
Alpha-Beta Horseshoe
(92)
Topology
:
Leucine-rich repeat, LRR (right-handed beta-alpha superhelix)
(73)
Homologous Superfamily
:
Ribonuclease Inhibitor
(73)
Listeria monocytogenes. Organism_taxid: 169963. Strain: egd-e.
(4)
1a
2wqxA01
A:36-245
1b
2wqxB01
B:36-245
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
[code=2.60.40.1220, no name defined]
(28)
Listeria monocytogenes. Organism_taxid: 169963. Strain: egd-e.
(4)
2a
2wqxA02
A:246-321
2b
2wqxB02
B:246-321
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Pfam Domains
(4, 10)
Info
all PFAM domains
1a: PFAM_LRR_4_2wqxB01 (B:164-206)
1b: PFAM_LRR_4_2wqxB02 (B:164-206)
1c: PFAM_LRR_4_2wqxB03 (B:164-206)
1d: PFAM_LRR_4_2wqxB04 (B:164-206)
2a: PFAM_LRR_6_2wqxB05 (B:207-233)
2b: PFAM_LRR_6_2wqxB06 (B:207-233)
3a: PFAM_Internalin_N_2wqxB07 (B:36-59)
3b: PFAM_Internalin_N_2wqxB08 (B:36-59)
4a: PFAM_LRR_adjacent_2wqxB09 (B:264-321)
4b: PFAM_LRR_adjacent_2wqxB10 (B:264-321)
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Clans
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Organisms
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Clan
:
LRR
(77)
Family
:
LRR_4
(28)
Listeria monocytogenes
(18)
1a
LRR_4-2wqxB01
B:164-206
1b
LRR_4-2wqxB02
B:164-206
1c
LRR_4-2wqxB03
B:164-206
1d
LRR_4-2wqxB04
B:164-206
Family
:
LRR_6
(24)
Listeria monocytogenes
(10)
2a
LRR_6-2wqxB05
B:207-233
2b
LRR_6-2wqxB06
B:207-233
Clan
:
no clan defined [family: Internalin_N]
(18)
Family
:
Internalin_N
(18)
Listeria monocytogenes
(18)
3a
Internalin_N-2wqxB07
B:36-59
3b
Internalin_N-2wqxB08
B:36-59
Clan
:
no clan defined [family: LRR_adjacent]
(15)
Family
:
LRR_adjacent
(15)
Listeria monocytogenes
(15)
4a
LRR_adjacent-2wqxB09
B:264-321
4b
LRR_adjacent-2wqxB10
B:264-321
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Asym.Unit (105 KB)
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Biol.Unit 1 (51 KB)
Header - Biol.Unit 1
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