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Asym. Unit
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Asym.Unit (319 KB)
Biol.Unit 1 (157 KB)
Biol.Unit 2 (160 KB)
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(1)
Title
:
TRYPANOSOMA BRUCEI TRYPANOTHIONE REDUCTASE IN COMPLEX WITH 3,4-DIHYDROQUINAZOLINE INHIBITOR (DDD00065414)
Authors
:
M. S. Alphey, S. Patterson, A. H. Fairlamb
Date
:
03 Aug 09 (Deposition) - 13 Oct 10 (Release) - 19 Oct 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: C,D (1x)
Biol. Unit 2: A,B (1x)
Keywords
:
Oxidoreductase, Trypanosomiasis, Sleeping Sickness, Flavoprotein, Redox-Active Center
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Patterson, M. S. Alphey, D. C. Jones, E. J. Shanks, I. P. Street, J. A. Frearson, P. G. Wyatt, I. H. Gilbert, A. H. Fairlamb
Dihydroquinazolines As A Novel Class Of Trypanosoma Brucei Trypanothione Reductase Inhibitors: Discovery, Synthesis, And Characterization Of Their Binding Mode By Protein Crystallography.
J. Med. Chem. V. 54 6514 2011
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Hetero Components
(6, 26)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
1d: CHLORIDE ION (CLd)
1e: CHLORIDE ION (CLe)
1f: CHLORIDE ION (CLf)
1g: CHLORIDE ION (CLg)
1h: CHLORIDE ION (CLh)
2a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
2b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
2c: FLAVIN-ADENINE DINUCLEOTIDE (FADc)
2d: FLAVIN-ADENINE DINUCLEOTIDE (FADd)
3a: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDa)
3b: (4S)-2-METHYL-2,4-PENTANEDIOL (MPDb)
4a: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDa)
4b: (4R)-2-METHYLPENTANE-2,4-DIOL (MRDb)
5a: SODIUM ION (NAa)
5b: SODIUM ION (NAb)
5c: SODIUM ION (NAc)
5d: SODIUM ION (NAd)
5e: SODIUM ION (NAe)
5f: SODIUM ION (NAf)
6a: METHYL [(4S)-6-BROMO-2-METHYL-4-PH... (WP5a)
6b: METHYL [(4S)-6-BROMO-2-METHYL-4-PH... (WP5b)
6c: METHYL [(4S)-6-BROMO-2-METHYL-4-PH... (WP5c)
6d: METHYL [(4S)-6-BROMO-2-METHYL-4-PH... (WP5d)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
8
Ligand/Ion
CHLORIDE ION
2
FAD
4
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
3
MPD
2
Ligand/Ion
(4S)-2-METHYL-2,4-PENTANEDIOL
4
MRD
2
Ligand/Ion
(4R)-2-METHYLPENTANE-2,4-DIOL
5
NA
6
Ligand/Ion
SODIUM ION
6
WP5
4
Ligand/Ion
METHYL [(4S)-6-BROMO-2-METHYL-4-PHENYLQUINAZOLIN-3(4H)-YL]ACETATE
[
close Hetero Component info
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Sites
(26, 26)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
18: BC9 (SOFTWARE)
19: CC1 (SOFTWARE)
20: CC2 (SOFTWARE)
21: CC3 (SOFTWARE)
22: CC4 (SOFTWARE)
23: CC5 (SOFTWARE)
24: CC6 (SOFTWARE)
25: CC7 (SOFTWARE)
26: CC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:10 , GLY A:11 , GLY A:13 , SER A:14 , GLY A:15 , VAL A:34 , ASP A:35 , VAL A:36 , ALA A:46 , ALA A:47 , GLY A:50 , THR A:51 , CYS A:52 , VAL A:55 , GLY A:56 , CYS A:57 , LYS A:60 , GLY A:125 , TRP A:126 , GLY A:127 , ALA A:159 , THR A:160 , GLY A:161 , ARG A:287 , ARG A:290 , GLY A:326 , ASP A:327 , MET A:333 , LEU A:334 , THR A:335 , PRO A:336 , HOH A:2001 , HOH A:2043 , HOH A:2048 , HOH A:2071 , HIS B:461 , PRO B:462
BINDING SITE FOR RESIDUE FAD A 998
02
AC2
SOFTWARE
SER A:14 , LEU A:17 , GLU A:18 , TRP A:21 , GLY A:49 , TYR A:110 , MET A:113 , PHE A:114
BINDING SITE FOR RESIDUE WP5 A1000
03
AC3
SOFTWARE
HIS A:461 , HOH A:2068 , GLY B:11 , GLY B:13 , SER B:14 , GLY B:15 , ASP B:35 , VAL B:36 , ALA B:46 , ALA B:47 , GLY B:50 , THR B:51 , CYS B:52 , GLY B:56 , CYS B:57 , LYS B:60 , GLY B:125 , GLY B:127 , ALA B:159 , THR B:160 , GLY B:161 , PHE B:198 , ARG B:287 , ARG B:290 , GLY B:326 , ASP B:327 , MET B:333 , LEU B:334 , THR B:335 , PRO B:336 , HOH B:2002 , HOH B:2011
BINDING SITE FOR RESIDUE FAD B 998
04
AC4
SOFTWARE
SER B:14 , LEU B:17 , GLU B:18 , TRP B:21 , GLY B:49 , TYR B:110 , MET B:113
BINDING SITE FOR RESIDUE WP5 B1000
05
AC5
SOFTWARE
ILE C:10 , GLY C:11 , GLY C:13 , SER C:14 , GLY C:15 , VAL C:34 , ASP C:35 , VAL C:36 , ALA C:46 , ALA C:47 , GLY C:50 , THR C:51 , CYS C:52 , CYS C:57 , LYS C:60 , GLY C:127 , ALA C:159 , THR C:160 , GLY C:161 , PHE C:198 , ARG C:287 , ARG C:290 , GLY C:326 , ASP C:327 , MET C:333 , LEU C:334 , THR C:335 , PRO C:336 , ALA C:338 , HOH C:2034 , HOH C:2035 , HOH C:2036 , HIS D:461
BINDING SITE FOR RESIDUE FAD C 998
06
AC6
SOFTWARE
SER C:14 , LEU C:17 , GLU C:18 , TRP C:21 , GLY C:49 , TYR C:110 , MET C:113
BINDING SITE FOR RESIDUE WP5 C1000
07
AC7
SOFTWARE
HIS C:461 , HOH C:2031 , ILE D:10 , GLY D:11 , GLY D:13 , SER D:14 , GLY D:15 , VAL D:34 , ASP D:35 , VAL D:36 , ALA D:46 , ALA D:47 , GLY D:50 , THR D:51 , CYS D:52 , VAL D:55 , GLY D:56 , CYS D:57 , LYS D:60 , GLY D:125 , GLY D:127 , ALA D:159 , THR D:160 , GLY D:161 , PHE D:198 , ARG D:287 , ARG D:290 , GLY D:326 , ASP D:327 , MET D:333 , LEU D:334 , THR D:335 , PRO D:336 , ALA D:338 , HOH D:2020 , HOH D:2054 , HOH D:2055 , HOH D:2056
BINDING SITE FOR RESIDUE FAD D 998
08
AC8
SOFTWARE
SER D:14 , LEU D:17 , GLU D:18 , TRP D:21 , GLY D:49 , TYR D:110 , MET D:113
BINDING SITE FOR RESIDUE WP5 D1000
09
AC9
SOFTWARE
ARG B:222
BINDING SITE FOR RESIDUE CL B1487
10
BC1
SOFTWARE
ASN B:91 , TRP B:92 , LYS B:93
BINDING SITE FOR RESIDUE CL B1488
11
BC2
SOFTWARE
TYR C:221 , ARG C:222
BINDING SITE FOR RESIDUE CL C1487
12
BC3
SOFTWARE
ARG D:222
BINDING SITE FOR RESIDUE CL D1487
13
BC4
SOFTWARE
ARG A:222 , ILE A:285
BINDING SITE FOR RESIDUE CL A1488
14
BC5
SOFTWARE
ASN A:91 , TRP A:92 , LYS A:93
BINDING SITE FOR RESIDUE CL A1489
15
BC6
SOFTWARE
TRP C:92
BINDING SITE FOR RESIDUE CL C1488
16
BC7
SOFTWARE
ASN D:91 , TRP D:92
BINDING SITE FOR RESIDUE CL D1488
17
BC8
SOFTWARE
TYR A:455 , THR A:457 , CYS A:469
BINDING SITE FOR RESIDUE NA A1490
18
BC9
SOFTWARE
TYR B:455 , THR B:457 , CYS B:469
BINDING SITE FOR RESIDUE NA B1489
19
CC1
SOFTWARE
TYR C:455 , THR C:457 , CYS C:469
BINDING SITE FOR RESIDUE NA C1489
20
CC2
SOFTWARE
TYR D:455 , THR D:457 , CYS D:469
BINDING SITE FOR RESIDUE NA D1489
21
CC3
SOFTWARE
PHE B:114 , THR B:117 , LEU B:120 , ASP B:121
BINDING SITE FOR RESIDUE NA B1490
22
CC4
SOFTWARE
PHE D:114 , THR D:117 , LEU D:120 , ASP D:121
BINDING SITE FOR RESIDUE NA D1490
23
CC5
SOFTWARE
PRO A:164 , SER A:178 , ILE A:199 , MET A:283 , ALA A:284 , ILE A:285 , GLY A:286 , ARG A:287 , HOH A:2041
BINDING SITE FOR RESIDUE MRD A1491
24
CC6
SOFTWARE
PRO D:164 , SER D:178 , ILE D:199 , MET D:283 , ALA D:284 , ILE D:285 , GLY D:286 , ARG D:287
BINDING SITE FOR RESIDUE MPD D1491
25
CC7
SOFTWARE
PHE A:123 , LEU A:124 , GLU A:149 , HOH A:2015
BINDING SITE FOR RESIDUE MRD A1492
26
CC8
SOFTWARE
THR D:360 , ARG D:361 , GLY D:376 , LEU D:377 , LEU D:425
BINDING SITE FOR RESIDUE MPD D1492
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SAPs(SNPs)/Variants
(0, 0)
Info
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PROSITE Patterns/Profiles
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Exons
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Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
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Atom Selection
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