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2WOW
Asym. Unit
Info
Asym.Unit (339 KB)
Biol.Unit 1 (167 KB)
Biol.Unit 2 (168 KB)
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(1)
Title
:
TRYPANOSOMA BRUCEI TRYPANOTHIONE REDUCTASE WITH NADP AND TRYPANOTHIONE BOUND
Authors
:
M. S. Alphey, A. H. Fairlamb
Date
:
30 Jul 09 (Deposition) - 04 Aug 10 (Release) - 28 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: C,D (1x)
Biol. Unit 2: A,B (1x)
Keywords
:
Disulfide Bond, Trypanosomiasis, Sleeping Sickness, Flavoprotein, Trypanothione, Oxidoreductase, Fad, Nadp, Reductase, Trypanosoma, Redox-Active Center
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
S. Patterson, M. S. Alphey, D. C. Jones, E. J. Shanks, I. P. Street, J. A. Frearson, P. G. Wyatt, I. H. Gilbert, A. H. Fairlamb
Dihydroquinazolines As A Novel Class Of Trypanosoma Brucei Trypanothione Reductase Inhibitors: Discovery, Synthesis, And Characterization Of Their Binding Mode By Protein Crystallography.
J. Med. Chem. V. 54 6514 2011
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Hetero Components
(3, 12)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
1c: FLAVIN-ADENINE DINUCLEOTIDE (FADc)
1d: FLAVIN-ADENINE DINUCLEOTIDE (FADd)
2a: BIS(GAMMA-GLUTAMYL-CYSTEINYL-GLYCI... (GCGa)
2b: BIS(GAMMA-GLUTAMYL-CYSTEINYL-GLYCI... (GCGb)
2c: BIS(GAMMA-GLUTAMYL-CYSTEINYL-GLYCI... (GCGc)
2d: BIS(GAMMA-GLUTAMYL-CYSTEINYL-GLYCI... (GCGd)
3a: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPa)
3b: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPb)
3c: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPc)
3d: NADPH DIHYDRO-NICOTINAMIDE-ADENINE... (NDPd)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
4
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
GCG
4
Ligand/Ion
BIS(GAMMA-GLUTAMYL-CYSTEINYL-GLYCINYL)SPERMIDINE
3
NDP
4
Ligand/Ion
NADPH DIHYDRO-NICOTINAMIDE-ADENINE-DINUCLEOTIDEPHOSPHATE
[
close Hetero Component info
]
Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ILE A:10 , GLY A:11 , GLY A:13 , SER A:14 , GLY A:15 , ASP A:35 , ALA A:46 , ALA A:47 , GLY A:50 , THR A:51 , CYS A:52 , VAL A:55 , GLY A:56 , CYS A:57 , LYS A:60 , GLY A:125 , TRP A:126 , GLY A:127 , ALA A:159 , THR A:160 , GLY A:161 , ARG A:287 , ARG A:290 , GLY A:326 , ASP A:327 , MET A:333 , LEU A:334 , THR A:335 , PRO A:336 , ALA A:338 , PHE A:367 , NDP A:800 , HOH A:2057 , HOH A:2107 , HOH A:2160 , HOH A:2161 , HOH A:2162 , HIS B:461
BINDING SITE FOR RESIDUE FAD A 700
02
AC2
SOFTWARE
LYS A:60 , GLY A:196 , GLY A:197 , PHE A:198 , ILE A:199 , GLU A:202 , TYR A:221 , ARG A:222 , ASN A:223 , ARG A:228 , ASN A:254 , ALA A:284 , ILE A:285 , GLY A:286 , MET A:333 , LEU A:334 , ALA A:365 , PHE A:367 , FAD A:700 , HOH A:2117 , HOH A:2136 , HOH A:2163 , HOH A:2164 , HOH A:2165 , HOH A:2166 , HOH A:2167 , HOH A:2168 , HOH A:2169
BINDING SITE FOR RESIDUE NDP A 800
03
AC3
SOFTWARE
SER A:14 , LEU A:17 , GLU A:18 , TRP A:21 , CYS A:52 , VAL A:53 , VAL A:58 , TYR A:110 , ILE A:339 , HOH A:2170 , HOH A:2171 , HOH A:2172 , HOH A:2173 , HOH A:2174 , MET B:393 , SER B:394 , SER B:395 , PHE B:396 , LEU B:399 , HIS B:461 , PRO B:462 , THR B:463 , GLU B:466 , GLU B:467 , SER B:470
BINDING SITE FOR RESIDUE GCG A 1001
04
AC4
SOFTWARE
HIS A:461 , PRO A:462 , GLY B:11 , GLY B:13 , SER B:14 , GLY B:15 , VAL B:34 , ASP B:35 , VAL B:36 , ALA B:46 , ALA B:47 , GLY B:50 , THR B:51 , CYS B:52 , VAL B:55 , GLY B:56 , CYS B:57 , LYS B:60 , GLY B:125 , TRP B:126 , GLY B:127 , ALA B:159 , THR B:160 , GLY B:161 , ILE B:199 , ARG B:287 , ARG B:290 , GLY B:326 , ASP B:327 , MET B:333 , LEU B:334 , THR B:335 , PRO B:336 , ALA B:338 , NDP B:800 , HOH B:2001 , HOH B:2097 , HOH B:2107 , HOH B:2139 , HOH B:2140 , HOH B:2141
BINDING SITE FOR RESIDUE FAD B 700
05
AC5
SOFTWARE
LYS B:60 , GLY B:196 , GLY B:197 , PHE B:198 , ILE B:199 , GLU B:202 , TYR B:221 , ARG B:222 , ASN B:223 , ARG B:228 , ASN B:254 , ILE B:285 , GLY B:286 , MET B:333 , LEU B:334 , ALA B:365 , FAD B:700 , HOH B:2061 , HOH B:2095 , HOH B:2142 , HOH B:2143 , HOH B:2144 , HOH B:2145 , HOH B:2146
BINDING SITE FOR RESIDUE NDP B 800
06
AC6
SOFTWARE
MET A:393 , SER A:394 , SER A:395 , PHE A:396 , PRO A:398 , LEU A:399 , HIS A:461 , PRO A:462 , THR A:463 , GLU A:466 , GLU A:467 , SER A:470 , SER B:14 , LEU B:17 , GLU B:18 , TRP B:21 , CYS B:52 , VAL B:53 , VAL B:58 , TYR B:110 , ILE B:339 , HOH B:2009 , HOH B:2147 , HOH B:2148 , HOH B:2149
BINDING SITE FOR RESIDUE GCG B 1001
07
AC7
SOFTWARE
ILE C:10 , GLY C:11 , GLY C:13 , SER C:14 , GLY C:15 , VAL C:34 , ASP C:35 , VAL C:36 , ALA C:46 , ALA C:47 , GLY C:50 , THR C:51 , CYS C:52 , VAL C:55 , GLY C:56 , CYS C:57 , LYS C:60 , GLY C:125 , TRP C:126 , GLY C:127 , ALA C:159 , THR C:160 , GLY C:161 , ARG C:287 , ARG C:290 , GLY C:326 , ASP C:327 , MET C:333 , LEU C:334 , THR C:335 , PRO C:336 , ALA C:338 , PHE C:367 , NDP C:800 , HOH C:2051 , HOH C:2095 , HOH C:2098 , HOH C:2106 , HOH C:2162 , HOH C:2163 , HIS D:461 , PRO D:462
BINDING SITE FOR RESIDUE FAD C 700
08
AC8
SOFTWARE
LYS C:60 , GLY C:196 , GLY C:197 , PHE C:198 , ILE C:199 , GLU C:202 , TYR C:221 , ARG C:222 , ASN C:223 , ARG C:228 , ASN C:254 , ALA C:284 , ILE C:285 , GLY C:286 , MET C:333 , LEU C:334 , ALA C:365 , PHE C:367 , FAD C:700 , HOH C:2120 , HOH C:2164 , HOH C:2165 , HOH C:2166 , HOH C:2167 , HOH C:2168 , HOH C:2169
BINDING SITE FOR RESIDUE NDP C 800
09
AC9
SOFTWARE
SER C:14 , LEU C:17 , GLU C:18 , TRP C:21 , CYS C:52 , VAL C:53 , VAL C:58 , TYR C:110 , ILE C:339 , HOH C:2017 , HOH C:2170 , HOH C:2171 , SER D:394 , SER D:395 , PHE D:396 , LEU D:399 , HIS D:461 , PRO D:462 , THR D:463 , GLU D:466 , GLU D:467 , SER D:470 , HOH D:2110 , HOH D:2129
BINDING SITE FOR RESIDUE GCG C 1001
10
BC1
SOFTWARE
HIS C:461 , PRO C:462 , ILE D:10 , GLY D:11 , GLY D:13 , SER D:14 , GLY D:15 , VAL D:34 , ASP D:35 , VAL D:36 , ALA D:46 , ALA D:47 , GLY D:50 , THR D:51 , CYS D:52 , VAL D:55 , GLY D:56 , CYS D:57 , LYS D:60 , GLY D:125 , GLY D:127 , ALA D:159 , THR D:160 , GLY D:161 , ARG D:287 , ARG D:290 , GLY D:326 , ASP D:327 , MET D:333 , LEU D:334 , THR D:335 , PRO D:336 , NDP D:800 , HOH D:2001 , HOH D:2024 , HOH D:2085 , HOH D:2133 , HOH D:2134 , HOH D:2135
BINDING SITE FOR RESIDUE FAD D 700
11
BC2
SOFTWARE
LYS D:60 , GLY D:196 , GLY D:197 , PHE D:198 , ILE D:199 , GLU D:202 , TYR D:221 , ARG D:222 , ASN D:223 , ARG D:228 , ASN D:254 , ALA D:284 , ILE D:285 , GLY D:286 , MET D:333 , LEU D:334 , ALA D:365 , FAD D:700 , HOH D:2075 , HOH D:2136 , HOH D:2137 , HOH D:2138 , HOH D:2139
BINDING SITE FOR RESIDUE NDP D 800
12
BC3
SOFTWARE
MET C:393 , SER C:394 , SER C:395 , PHE C:396 , PRO C:398 , LEU C:399 , HIS C:461 , PRO C:462 , THR C:463 , GLU C:466 , GLU C:467 , SER C:470 , HOH C:2155 , SER D:14 , LEU D:17 , GLU D:18 , TRP D:21 , CYS D:52 , VAL D:58 , TYR D:110 , ILE D:339 , HOH D:2005 , HOH D:2140
BINDING SITE FOR RESIDUE GCG D 1001
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
Info
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End label:
Sorry, no Info available
[
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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Sorry, no Info available
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CATH Domains
(2, 12)
Info
all CATH domains
1a: CATH_2wowA03 (A:361-472)
1b: CATH_2wowB03 (B:361-472)
1c: CATH_2wowC03 (C:361-472)
1d: CATH_2wowD03 (D:361-472)
2a: CATH_2wowB01 (B:2-164,B:286-360)
2b: CATH_2wowD01 (D:2-164,D:286-360)
2c: CATH_2wowC02 (C:165-285)
2d: CATH_2wowD02 (D:165-285)
2e: CATH_2wowA01 (A:-1-164,A:286-360)
2f: CATH_2wowC01 (C:-1-164,C:286-360)
2g: CATH_2wowA02 (A:165-285)
2h: CATH_2wowB02 (B:165-285)
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Classes
(
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(
)
Architectures
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(
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Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Enolase-like; domain 1
(252)
Homologous Superfamily
:
[code=3.30.390.30, no name defined]
(99)
Trypanosoma brucei. Organism_taxid: 185431. Strain: treu927.
(2)
1a
2wowA03
A:361-472
1b
2wowB03
B:361-472
1c
2wowC03
C:361-472
1d
2wowD03
D:361-472
Architecture
:
3-Layer(bba) Sandwich
(528)
Topology
:
FAD/NAD(P)-binding domain
(373)
Homologous Superfamily
:
[code=3.50.50.60, no name defined]
(373)
Trypanosoma brucei. Organism_taxid: 185431. Strain: treu927.
(2)
2a
2wowB01
B:2-164,B:286-360
2b
2wowD01
D:2-164,D:286-360
2c
2wowC02
C:165-285
2d
2wowD02
D:165-285
2e
2wowA01
A:-1-164,A:286-360
2f
2wowC01
C:-1-164,C:286-360
2g
2wowA02
A:165-285
2h
2wowB02
B:165-285
[
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Pfam Domains
(0, 0)
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