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2WOJ
Biol. Unit 1
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Asym.Unit (420 KB)
Biol.Unit 1 (205 KB)
Biol.Unit 2 (211 KB)
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(1)
Title
:
ADP-ALF4 COMPLEX OF S. CEREVISIAE GET3
Authors
:
A. Mateja, A. Szlachcic, M. E. Downing, M. Dobosz, M. Mariappan, R. S. Hegde, R. J. Keenan
Date
:
26 Jul 09 (Deposition) - 11 Aug 09 (Release) - 22 Sep 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.99
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: C,D (1x)
Biol. Unit 2: A,B (1x)
Keywords
:
Tail-Anchored, Membrane Protein, Targeting Factor, Endoplasmic Reticulum, Get3, Atpase, Trc40, Atp-Binding, Golgi Apparatus, Er-Golgi Transport, Nucleotide-Binding, Arsenical Resistance, Nucleus, Hydrolase, Cytoplasm, Transport, Arsa, Arsenite
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
A. Mateja, A. Szlachcic, M. E. Downing, M. Dobosz, M. Mariappan, R. S. Hegde, R. J. Keenan
The Structural Basis Of Tail-Anchored Membrane Protein Recognition By Get3.
Nature V. 461 361 2009
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Hetero Components
(2, 4)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
1b: ADENOSINE-5'-DIPHOSPHATE (ADPb)
1c: ADENOSINE-5'-DIPHOSPHATE (ADPc)
1d: ADENOSINE-5'-DIPHOSPHATE (ADPd)
2a: TETRAFLUOROALUMINATE ION (ALFa)
2b: TETRAFLUOROALUMINATE ION (ALFb)
2c: TETRAFLUOROALUMINATE ION (ALFc)
2d: TETRAFLUOROALUMINATE ION (ALFd)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ADP
2
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
ALF
2
Ligand/Ion
TETRAFLUOROALUMINATE ION
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
ZN
-1
Ligand/Ion
ZINC ION
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Sites
(7, 7)
Info
All Sites
1: AC7 (SOFTWARE)
2: AC8 (SOFTWARE)
3: AC9 (SOFTWARE)
4: BC1 (SOFTWARE)
5: BC2 (SOFTWARE)
6: BC3 (SOFTWARE)
7: BC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC7
SOFTWARE
GLY C:28 , VAL C:29 , GLY C:30 , LYS C:31 , THR C:32 , THR C:33 , ASN C:272 , PRO C:315 , LEU C:316 , CYS C:317 , GLY C:319 , ILE C:321 , PHE C:330 , ALF C:402 , MG C:403 , HOH C:2033 , HOH C:2066 , HOH C:2104 , HOH C:2105 , HOH C:2118 , LYS D:26 , GLU D:245 , LEU D:247
BINDING SITE FOR RESIDUE ADP C 401
2
AC8
SOFTWARE
GLY C:27 , GLY C:28 , LYS C:31 , ASP C:57 , ASN C:61 , PRO C:169 , ADP C:401 , MG C:403 , HOH C:2026 , HOH C:2027 , HOH C:2033 , HOH C:2034 , HOH C:2066 , LYS D:26 , GLY D:27
BINDING SITE FOR RESIDUE ALF C 402
3
AC9
SOFTWARE
THR C:32 , ADP C:401 , ALF C:402 , HOH C:2026 , HOH C:2033 , HOH C:2066
BINDING SITE FOR RESIDUE MG C 403
4
BC1
SOFTWARE
LYS C:26 , GLU C:245 , LEU C:247 , HOH C:2093 , GLY D:28 , VAL D:29 , GLY D:30 , LYS D:31 , THR D:32 , THR D:33 , ASN D:272 , PRO D:315 , CYS D:317 , GLY D:319 , GLU D:320 , ILE D:321 , PHE D:330 , ALF D:402 , MG D:403 , HOH D:2028 , HOH D:2055 , HOH D:2094 , HOH D:2097
BINDING SITE FOR RESIDUE ADP D 401
5
BC2
SOFTWARE
LYS C:26 , GLY C:27 , GLY D:27 , GLY D:28 , LYS D:31 , ASP D:57 , ASN D:61 , PRO D:169 , ADP D:401 , MG D:403 , HOH D:2022 , HOH D:2023 , HOH D:2028 , HOH D:2029 , HOH D:2055
BINDING SITE FOR RESIDUE ALF D 402
6
BC3
SOFTWARE
THR D:32 , ADP D:401 , ALF D:402 , HOH D:2022 , HOH D:2028 , HOH D:2055
BINDING SITE FOR RESIDUE MG D 403
7
BC5
SOFTWARE
CYS C:285 , CYS C:288 , CYS D:285 , CYS D:288
BINDING SITE FOR RESIDUE ZN C1352
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_ArsA_ATPase_2wojD01 (D:18-336)
1b: PFAM_ArsA_ATPase_2wojD02 (D:18-336)
1c: PFAM_ArsA_ATPase_2wojD03 (D:18-336)
1d: PFAM_ArsA_ATPase_2wojD04 (D:18-336)
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Clan
:
P-loop_NTPase
(1112)
Family
:
ArsA_ATPase
(6)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(4)
1a
ArsA_ATPase-2wojD01
D:18-336
1b
ArsA_ATPase-2wojD02
D:18-336
1c
ArsA_ATPase-2wojD03
D:18-336
1d
ArsA_ATPase-2wojD04
D:18-336
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Asymmetric Unit 1
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Asym.Unit (420 KB)
Header - Asym.Unit
Biol.Unit 1 (205 KB)
Header - Biol.Unit 1
Biol.Unit 2 (211 KB)
Header - Biol.Unit 2
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