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2WI2
Asym. Unit
Info
Asym.Unit (80 KB)
Biol.Unit 1 (38 KB)
Biol.Unit 2 (38 KB)
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(1)
Title
:
ORALLY ACTIVE 2-AMINO THIENOPYRIMIDINE INHIBITORS OF THE HSP90 CHAPERONE
Authors
:
P. A. Brough, X. Barril, J. Borgognoni, P. Chene, N. G. M. Davies, B. Davi M. J. Drysdale, B. Dymock, S. A. Eccles, C. Garcia-Echeverria, C. From A. Hayes, R. E. Hubbard, A. M. Jordan, M. Rugaard-Jensen, A. Massey, A. A. Padfield, R. Parsons, T. Radimerski, F. I. Raynaud, A. Robertson, S. D. Roughley, J. Schoepfer, H. Simmonite, A. Surgenor, M. Valenti, S P. Webb, M. Wood, P. Workman, L. M. Wright
Date
:
08 May 09 (Deposition) - 28 Jul 09 (Release) - 10 Aug 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.09
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Pu3, Hsp90, Atpase, Chaperone, Heat Shock, Stress Response, Nucleotide-Binding, Atp-Binding, Phosphoprotein, Phosphorylation
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
P. A. Brough, X. Barril, J. Borgognoni, P. Chene, N. G. M. Davies, B. Davis, M. J. Drysdale, B. Dymock, S. A. Eccles, C. Garcia-Echeverria, C. Fromont, A. Hayes, R. E. Hubbard, A. M. Jordan, M. R. Jensen, A. Massey, A. Merrett, A. Padfield, R. Parsons, T. Radimerski, F. I. Raynaud, A. Robertson, S. D. Roughley J. Schoepfer, H. Simmonite, S. Y. Sharp, A. Surgenor, M. Valenti, S. Walls, P. Webb, M. Wood, P. Workman, L. Wright
Combining Hit Identification Strategies: Fragment- Based And In Silico Approaches To Orally Active 2- Aminothieno[2, 3-D]Pyrimidine Inhibitors Of The Hsp90 Molecular Chaperone.
J. Med. Chem. V. 52 4794 2009
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: DIMETHYL SULFOXIDE (DMSa)
2a: 4-METHYL-6-(METHYLSULFANYL)-1,3,5-... (ZZ3a)
2b: 4-METHYL-6-(METHYLSULFANYL)-1,3,5-... (ZZ3b)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
DMS
1
Ligand/Ion
DIMETHYL SULFOXIDE
2
ZZ3
2
Ligand/Ion
4-METHYL-6-(METHYLSULFANYL)-1,3,5-TRIAZIN-2-AMINE
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Sites
(3, 3)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:54 , HOH A:2067 , HOH A:2118
BINDING SITE FOR RESIDUE DMS A1225
2
AC2
SOFTWARE
ALA A:55 , ASP A:93 , ILE A:96 , THR A:184 , HOH A:2058 , HOH A:2086 , HOH A:2119
BINDING SITE FOR RESIDUE ZZ3 A1226
3
AC3
SOFTWARE
ALA B:55 , ASP B:93 , ILE B:96 , GLY B:97 , MET B:98 , THR B:184 , HOH B:2011 , HOH B:2025 , HOH B:2029 , HOH B:2063 , HOH B:2098
BINDING SITE FOR RESIDUE ZZ3 B1225
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: HSP90 (A:38-47,B:38-47)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
HSP90
PS00298
Heat shock hsp90 proteins family signature.
HS90A_HUMAN
38-47
2
A:38-47
B:38-47
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Exons
(4, 8)
Info
All Exons
Exon 1.4 (A:16-54 | B:16-54)
Exon 1.5b (A:55-177 | B:55-177)
Exon 1.6 (A:177-221 | B:177-221)
Exon 1.7a (A:222-224 | B:222-224)
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All Exon Boundaries
1: Boundary 1.3a/1.4
2: Boundary 1.4/1.5b
3: Boundary 1.5b/1.6
4: Boundary 1.6/1.7a
5: Boundary 1.7a/1.8
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.3a
ENST00000216281
3a
ENSE00001651517
chr14:
102553512-102553323
190
HS90A_HUMAN
-
0
0
-
-
1.4
ENST00000216281
4
ENSE00001700936
chr14:
102552715-102552554
162
HS90A_HUMAN
1-54
54
2
A:16-54
B:16-54
39
39
1.5b
ENST00000216281
5b
ENSE00001335380
chr14:
102552461-102552095
367
HS90A_HUMAN
55-177
123
2
A:55-177
B:55-177
123
123
1.6
ENST00000216281
6
ENSE00000660451
chr14:
102551768-102551635
134
HS90A_HUMAN
177-221
45
2
A:177-221
B:177-221
45
45
1.7a
ENST00000216281
7a
ENSE00001322485
chr14:
102551335-102551018
318
HS90A_HUMAN
222-327
106
2
A:222-224
B:222-224
3
3
1.8
ENST00000216281
8
ENSE00001622756
chr14:
102550901-102550736
166
HS90A_HUMAN
328-383
56
0
-
-
1.9
ENST00000216281
9
ENSE00000660447
chr14:
102550320-102550130
191
HS90A_HUMAN
383-446
64
0
-
-
1.10
ENST00000216281
10
ENSE00000520723
chr14:
102550030-102549883
148
HS90A_HUMAN
447-496
50
0
-
-
1.11
ENST00000216281
11
ENSE00000660445
chr14:
102549639-102549371
269
HS90A_HUMAN
496-585
90
0
-
-
1.12
ENST00000216281
12
ENSE00000660444
chr14:
102548781-102548448
334
HS90A_HUMAN
586-697
112
0
-
-
1.13b
ENST00000216281
13b
ENSE00001784253
chr14:
102548158-102547073
1086
HS90A_HUMAN
697-732
36
0
-
-
[
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2wi2a_ (A:)
1b: SCOP_d2wi2b_ (B:)
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Protein Domains
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(
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Organisms
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(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Superfamily
:
ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase
(364)
Family
:
Heat shock protein 90, HSP90, N-terminal domain
(238)
Protein domain
:
automated matches
(112)
Human (Homo sapiens) [TaxId: 9606]
(94)
1a
d2wi2a_
A:
1b
d2wi2b_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2wi2A00 (A:16-224)
1b: CATH_2wi2B00 (B:16-224)
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Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Heat Shock Protein 90
(209)
Homologous Superfamily
:
[code=3.30.565.10, no name defined]
(205)
Human (Homo sapiens)
(95)
1a
2wi2A00
A:16-224
1b
2wi2B00
B:16-224
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_HATPase_c_2wi2B01 (B:40-193)
1b: PFAM_HATPase_c_2wi2B02 (B:40-193)
2a: PFAM_HSP90_2wi2B03 (B:196-224)
2b: PFAM_HSP90_2wi2B04 (B:196-224)
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Clans
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(
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(
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Organisms
(
)
(
)
Clan
:
His_Kinase_A
(147)
Family
:
HATPase_c
(132)
Homo sapiens (Human)
(95)
1a
HATPase_c-2wi2B01
B:40-193
1b
HATPase_c-2wi2B02
B:40-193
Clan
:
no clan defined [family: HSP90]
(107)
Family
:
HSP90
(107)
Homo sapiens (Human)
(84)
2a
HSP90-2wi2B03
B:196-224
2b
HSP90-2wi2B04
B:196-224
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