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Asym. Unit
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Asym.Unit (37 KB)
Biol.Unit 1 (32 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF MACHUPO VIRUS ENVELOPE GLYCOPROTEIN GP1
Authors
:
T. A. Bowden, M. Crispin, S. C. Graham, D. J. Harvey, J. M. Grimes, E. Y. Jones, D. I. Stuart
Date
:
09 Apr 09 (Deposition) - 16 Jun 09 (Release) - 04 Aug 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.73
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Glycoprotein, Arenavirus, New World Arenavirus, Hemorrhagic Fever Virus, Envelope Protein, Machupo, Junin, Guanarito, Sabia, Chapare, Virion, Macv, Gp1, Viral Attachment, Transferrin Receptor, Viral Protein
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Reference
:
T. A. Bowden, M. Crispin, S. C. Graham, D. J. Harvey, J. M. Grimes, E. Y. Jones, D. I. Stuart
Unusual Molecular Architecture Of The Machupo Virus Attachment Glycoprotein.
J. Virol. V. 83 8259 2009
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Hetero Components
(1, 5)
Info
All Hetero Components
1a: N-ACETYL-D-GLUCOSAMINE (NAGa)
1b: N-ACETYL-D-GLUCOSAMINE (NAGb)
1c: N-ACETYL-D-GLUCOSAMINE (NAGc)
1d: N-ACETYL-D-GLUCOSAMINE (NAGd)
1e: N-ACETYL-D-GLUCOSAMINE (NAGe)
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No.
Name
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Type
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1
NAG
5
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
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2: AC2 (SOFTWARE)
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4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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Name
Evidence
Residues
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1
AC1
SOFTWARE
ASN A:166 , THR A:168 , HOH A:2189
BINDING SITE FOR RESIDUE NAG A1240
2
AC2
SOFTWARE
ASN A:95 , SER A:97 , PHE A:98 , HOH A:2190 , HOH A:2191
BINDING SITE FOR RESIDUE NAG A1241
3
AC3
SOFTWARE
LEU A:118 , GLN A:176 , ASN A:178 , SER A:180 , GLU A:184 , TYR A:214 , NAG A:1244 , HOH A:2130 , HOH A:2135 , HOH A:2192 , HOH A:2193 , HOH A:2194 , HOH A:2195
BINDING SITE FOR RESIDUE NAG A1242
4
AC4
SOFTWARE
ASN A:137 , LYS A:167 , LYS A:169 , LYS A:170 , GLY A:172 , HOH A:2196
BINDING SITE FOR RESIDUE NAG A1243
5
AC5
SOFTWARE
GLY A:210 , NAG A:1242 , HOH A:2197 , HOH A:2198
BINDING SITE FOR RESIDUE NAG A1244
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Pfam Domains
(1, 1)
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1a: PFAM_Arena_glycoprot_2wfoA01 (A:87-239)
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Clan
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no clan defined [family: Arena_glycoprot]
(10)
Family
:
Arena_glycoprot
(10)
Machupo virus (MACV)
(2)
1a
Arena_glycoprot-2wfoA01
A:87-239
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Asymmetric Unit 1
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