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2WFK
Biol. Unit 1
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Asym.Unit (415 KB)
Biol.Unit 1 (810 KB)
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(1)
Title
:
CALCIUM BOUND LIPL32
Authors
:
J. -Y. Tung, C. -W. Yang, Y. -J. Sun
Date
:
07 Apr 09 (Deposition) - 24 Nov 09 (Release) - 18 May 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D,E
Biol. Unit 1: A,B,C,D,E (2x)
Keywords
:
Fibronectin, Lipoprotein, Calcium Binding, Extracellular Matrix Outer Membrane Protein, Metal Binding Protein, Ca2+-Bound
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. -Y. Tung, C. -W. Yang, S. Chou, C. Lin, Y. -J. Sun
Calcium Binds To Lipl32, A Lipoprotein From Pathogenic Leptospira, And Modulates Fibronectin Binding.
J. Biol. Chem. V. 285 3245 2010
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Hetero Components
(1, 50)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
2a: SELENOMETHIONINE (MSEa)
2b: SELENOMETHIONINE (MSEb)
2c: SELENOMETHIONINE (MSEc)
2d: SELENOMETHIONINE (MSEd)
2e: SELENOMETHIONINE (MSEe)
2f: SELENOMETHIONINE (MSEf)
2g: SELENOMETHIONINE (MSEg)
2h: SELENOMETHIONINE (MSEh)
2i: SELENOMETHIONINE (MSEi)
2j: SELENOMETHIONINE (MSEj)
2k: SELENOMETHIONINE (MSEk)
2l: SELENOMETHIONINE (MSEl)
2m: SELENOMETHIONINE (MSEm)
2n: SELENOMETHIONINE (MSEn)
2o: SELENOMETHIONINE (MSEo)
2p: SELENOMETHIONINE (MSEp)
2q: SELENOMETHIONINE (MSEq)
2r: SELENOMETHIONINE (MSEr)
2s: SELENOMETHIONINE (MSEs)
2t: SELENOMETHIONINE (MSEt)
2u: SELENOMETHIONINE (MSEu)
2v: SELENOMETHIONINE (MSEv)
2w: SELENOMETHIONINE (MSEw)
2x: SELENOMETHIONINE (MSEx)
2y: SELENOMETHIONINE (MSEy)
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No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
MSE
50
Mod. Amino Acid
SELENOMETHIONINE
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Sites
(5, 5)
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All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:113 , THR A:114 , ASP A:145 , ASP A:146 , TYR A:159
BINDING SITE FOR RESIDUE CA A1250
2
AC2
SOFTWARE
ASP B:113 , THR B:114 , ASP B:145 , ASP B:146 , TYR B:159
BINDING SITE FOR RESIDUE CA B1250
3
AC3
SOFTWARE
ASP C:113 , THR C:114 , ASP C:145 , ASP C:146 , TYR C:159
BINDING SITE FOR RESIDUE CA C1250
4
AC4
SOFTWARE
ASP D:113 , THR D:114 , ASP D:145 , ASP D:146 , TYR D:159
BINDING SITE FOR RESIDUE CA D1250
5
AC5
SOFTWARE
ASP E:113 , THR E:114 , ASP E:145 , ASP E:146 , TYR E:159
BINDING SITE FOR RESIDUE CA E1250
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SAPs(SNPs)/Variants
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Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
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CATH Domains
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Pfam Domains
(1, 5)
Info
all PFAM domains
1a: PFAM_Lipl32_2wfkE01 (E:27-224)
1b: PFAM_Lipl32_2wfkE02 (E:27-224)
1c: PFAM_Lipl32_2wfkE03 (E:27-224)
1d: PFAM_Lipl32_2wfkE04 (E:27-224)
1e: PFAM_Lipl32_2wfkE05 (E:27-224)
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Clan
:
no clan defined [family: Lipl32]
(2)
Family
:
Lipl32
(2)
Leptospira santarosai
(1)
1a
Lipl32-2wfkE01
E:27-224
1b
Lipl32-2wfkE02
E:27-224
1c
Lipl32-2wfkE03
E:27-224
1d
Lipl32-2wfkE04
E:27-224
1e
Lipl32-2wfkE05
E:27-224
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Asym.Unit (415 KB)
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