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2WDC
Asym. Unit
Info
Asym.Unit (109 KB)
Biol.Unit 1 (104 KB)
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(1)
Title
:
TERMUS THERMOPHILUS SULFATE THIOHYDROLASE SOXB IN COMPLEX WITH GLYCEROL
Authors
:
V. Sauve, P. Roversi, K. J. Leath, E. F. Garman, R. Antrobus, S. M. Lea, B.
Date
:
24 Mar 09 (Deposition) - 16 Jun 09 (Release) - 05 Jul 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.50
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Sulfur-Sulfur Hydrolysis, Sulfur Oxidation Pathway, Sox, Soxb, Cys S- Thiosulfonate, Hydrolase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
V. Sauve, P. Roversi, K. J. Leath, E. F. Garman, R. Antrobus, S. M. Lea, B. C. Berks
Mechanism For The Hydrolysis Of A Sulfur-Sulfur Bond Based On The Crystal Structure Of The Thiosulfohydrolase Soxb.
J. Biol. Chem. V. 284 21707 2009
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Hetero Components
(4, 17)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
1b: ACETATE ION (ACTb)
1c: ACETATE ION (ACTc)
1d: ACETATE ION (ACTd)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
3a: MANGANESE (II) ION (MNa)
3b: MANGANESE (II) ION (MNb)
4a: TERTIARY-BUTYL ALCOHOL (TBUa)
4b: TERTIARY-BUTYL ALCOHOL (TBUb)
4c: TERTIARY-BUTYL ALCOHOL (TBUc)
4d: TERTIARY-BUTYL ALCOHOL (TBUd)
4e: TERTIARY-BUTYL ALCOHOL (TBUe)
4f: TERTIARY-BUTYL ALCOHOL (TBUf)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ACT
4
Ligand/Ion
ACETATE ION
2
GOL
5
Ligand/Ion
GLYCEROL
3
MN
2
Ligand/Ion
MANGANESE (II) ION
4
TBU
6
Ligand/Ion
TERTIARY-BUTYL ALCOHOL
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
GLN A:452 , ALA A:455 , VAL A:456 , ASP A:459 , SER A:547 , TBU A:1589 , HOH A:2554
BINDING SITE FOR RESIDUE GOL A 1574
02
AC2
SOFTWARE
LEU A:82 , ARG A:83 , VAL A:87 , GLU A:88 , LEU A:204 , PHE A:205 , HOH A:2060 , HOH A:2555 , HOH A:2556
BINDING SITE FOR RESIDUE GOL A 1575
03
AC3
SOFTWARE
TYR A:37 , ARG A:107 , THR A:108 , GLY A:110 , LYS A:329 , GLU A:348 , HOH A:2019 , HOH A:2557 , HOH A:2558
BINDING SITE FOR RESIDUE GOL A 1576
04
AC4
SOFTWARE
HIS A:49 , ASP A:143 , HIS A:174 , TRP A:175 , HIS A:297 , HIS A:299 , VAL A:415 , ARG A:416 , TRP A:417 , MN A:1590 , MN A:1591 , HOH A:2438 , HOH A:2560 , HOH A:2561
BINDING SITE FOR RESIDUE GOL A 1577
05
AC5
SOFTWARE
PRO A:36 , TYR A:37 , GLY A:38 , ASP A:39 , ALA A:40 , THR A:41 , VAL A:129 , GLU A:132 , GLY A:134 , LYS A:135 , ARG A:325 , ASP A:327 , HOH A:2559
BINDING SITE FOR RESIDUE GOL A 1578
06
AC6
SOFTWARE
GLY A:549 , HOH A:2361 , HOH A:2564
BINDING SITE FOR RESIDUE ACT A 1580
07
AC7
SOFTWARE
GLU A:379 , ARG A:552
BINDING SITE FOR RESIDUE ACT A 1581
08
AC8
SOFTWARE
PRO A:54 , ACT A:1583
BINDING SITE FOR RESIDUE ACT A 1582
09
AC9
SOFTWARE
PHE A:53 , ACT A:1582
BINDING SITE FOR RESIDUE ACT A 1583
10
BC1
SOFTWARE
HIS A:349
BINDING SITE FOR RESIDUE TBU A 1584
11
BC2
SOFTWARE
LYS A:361 , GLN A:368
BINDING SITE FOR RESIDUE TBU A 1585
12
BC3
SOFTWARE
GLU A:194 , PHE A:195 , PRO A:211 , HOH A:2199
BINDING SITE FOR RESIDUE TBU A 1586
13
BC4
SOFTWARE
GLU A:157
BINDING SITE FOR RESIDUE TBU A 1587
14
BC5
SOFTWARE
LEU A:152 , TYR A:433 , HOH A:2074
BINDING SITE FOR RESIDUE TBU A 1588
15
BC6
SOFTWARE
ALA A:402 , SER A:547 , GOL A:1574 , HOH A:2420
BINDING SITE FOR RESIDUE TBU A 1589
16
BC7
SOFTWARE
ASP A:47 , HIS A:49 , ASP A:143 , HIS A:299 , GOL A:1577 , MN A:1591 , HOH A:2561
BINDING SITE FOR RESIDUE MN A 1590
17
BC8
SOFTWARE
ASP A:143 , HIS A:174 , HIS A:274 , HIS A:297 , GOL A:1577 , MN A:1590 , HOH A:2561
BINDING SITE FOR RESIDUE MN A 1591
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain A
Asymmetric Unit 1
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Asym.Unit (109 KB)
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