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2WBI
Biol. Unit 1
Info
Asym.Unit (131 KB)
Biol.Unit 1 (243 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF HUMAN ACYL-COA DEHYDROGENASE 11
Authors
:
J. R. C. Muniz, K. Guo, P. Savitsky, A. Roos, W. Yue, E. Pilka, F. Von Delf A. M. Edwards, C. Bountra, C. H. Arrowsmith, J. Weigelt, U. Oppermann
Date
:
28 Feb 09 (Deposition) - 12 May 09 (Release) - 05 Dec 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.80
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (2x)
Keywords
:
Human, Acyl-Coa, Dehydrogenase, Phosphoprotein, Oxidoreductase
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. R. C. Muniz, K. Guo, P. Savitsky, A. Roos, W. Yue, E. Pilka, F. Von Delft, A. M. Edwards, C. Bountra, C. H. Arrowsmith, J. Weigelt, U. Oppermann
Crystal Structure Of Human Acyl-Coa Dehydrogenase 11
To Be Published
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Hetero Components
(3, 36)
Info
All Hetero Components
1a: FLAVIN-ADENINE DINUCLEOTIDE (FADa)
1b: FLAVIN-ADENINE DINUCLEOTIDE (FADb)
2a: PHOSPHATE ION (PO4a)
2b: PHOSPHATE ION (PO4b)
3a: UNKNOWN ATOM (UNXa)
3b: UNKNOWN ATOM (UNXb)
3c: UNKNOWN ATOM (UNXc)
3d: UNKNOWN ATOM (UNXd)
3e: UNKNOWN ATOM (UNXe)
3f: UNKNOWN ATOM (UNXf)
3g: UNKNOWN ATOM (UNXg)
3h: UNKNOWN ATOM (UNXh)
3i: UNKNOWN ATOM (UNXi)
3j: UNKNOWN ATOM (UNXj)
3k: UNKNOWN ATOM (UNXk)
3l: UNKNOWN ATOM (UNXl)
3m: UNKNOWN ATOM (UNXm)
3n: UNKNOWN ATOM (UNXn)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
FAD
4
Ligand/Ion
FLAVIN-ADENINE DINUCLEOTIDE
2
PO4
4
Ligand/Ion
PHOSPHATE ION
3
UNX
28
Ligand/Ion
UNKNOWN ATOM
[
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Sites
(17, 17)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: BC6 (SOFTWARE)
16: BC7 (SOFTWARE)
17: BC8 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
PHE A:152 , MET A:154 , THR A:155 , ALA A:160 , SER A:161 , SER A:162 , TRP A:186 , SER A:188 , HIS A:246 , VAL A:397 , LEU A:400 , PRO A:404 , GLU A:406 , VAL A:407 , ARG B:305 , PHE B:308 , LEU B:312 , HIS B:315 , GLU B:316 , GLN B:375 , VAL B:376 , GLY B:378 , GLY B:379
BINDING SITE FOR RESIDUE FAD A 600
02
AC2
SOFTWARE
ARG A:305 , PHE A:308 , LEU A:312 , HIS A:315 , GLU A:316 , GLN A:375 , VAL A:376 , GLY A:378 , GLY A:379 , PHE B:152 , MET B:154 , THR B:155 , ALA B:160 , SER B:161 , SER B:162 , TRP B:186 , SER B:188 , HIS B:246 , VAL B:397 , LEU B:400 , PRO B:404 , GLU B:406 , VAL B:407
BINDING SITE FOR RESIDUE FAD B 600
03
AC3
SOFTWARE
LYS A:310 , HIS A:315 , GLU A:316
BINDING SITE FOR RESIDUE PO4 A1427
04
AC4
SOFTWARE
LYS B:310 , ALA B:314 , HIS B:315 , GLU B:316
BINDING SITE FOR RESIDUE PO4 B1426
05
AC5
SOFTWARE
ARG A:275 , HIS A:283 , ASP A:402
BINDING SITE FOR RESIDUE UNX A1428
06
AC6
SOFTWARE
SER A:188
BINDING SITE FOR RESIDUE UNX A1429
07
AC7
SOFTWARE
UNX A:1431
BINDING SITE FOR RESIDUE UNX A1430
08
AC8
SOFTWARE
UNX A:1430 , UNX A:1432
BINDING SITE FOR RESIDUE UNX A1431
09
AC9
SOFTWARE
ASN A:390 , UNX A:1431
BINDING SITE FOR RESIDUE UNX A1432
10
BC1
SOFTWARE
ARG B:275 , ASP B:402 , UNX B:1428
BINDING SITE FOR RESIDUE UNX B1427
11
BC2
SOFTWARE
UNX B:1427
BINDING SITE FOR RESIDUE UNX B1428
12
BC3
SOFTWARE
ASP B:240 , UNX B:1430
BINDING SITE FOR RESIDUE UNX B1429
13
BC4
SOFTWARE
ASN B:390 , UNX B:1429 , UNX B:1431
BINDING SITE FOR RESIDUE UNX B1430
14
BC5
SOFTWARE
ASN B:390 , UNX B:1430 , UNX B:1432
BINDING SITE FOR RESIDUE UNX B1431
15
BC6
SOFTWARE
UNX B:1431
BINDING SITE FOR RESIDUE UNX B1432
16
BC7
SOFTWARE
UNX B:1435
BINDING SITE FOR RESIDUE UNX B1434
17
BC8
SOFTWARE
UNX B:1434
BINDING SITE FOR RESIDUE UNX B1435
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(, 0)
Info
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;
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Sorry, no Info available
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Exons
(0, 0)
Info
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(2, 4)
Info
All SCOP Domains
1a: SCOP_d2wbia2 (A:266-425)
1b: SCOP_d2wbib2 (B:266-424)
2a: SCOP_d2wbia1 (A:22-265)
2b: SCOP_d2wbib1 (B:22-265)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
Bromodomain-like
(339)
Superfamily
:
Acyl-CoA dehydrogenase C-terminal domain-like
(61)
Family
:
automated matches
(29)
Protein domain
:
automated matches
(29)
Human (Homo sapiens) [TaxId: 9606]
(4)
1a
d2wbia2
A:266-425
1b
d2wbib2
B:266-424
Class
:
Multi-domain proteins (alpha and beta)
(2421)
Fold
:
Acyl-CoA dehydrogenase NM domain-like
(61)
Superfamily
:
Acyl-CoA dehydrogenase NM domain-like
(61)
Family
:
automated matches
(26)
Protein domain
:
automated matches
(26)
Human (Homo sapiens) [TaxId: 9606]
(2)
2a
d2wbia1
A:22-265
2b
d2wbib1
B:22-265
[
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2wbiA02 (A:150-266)
1b: CATH_2wbiB02 (B:150-266)
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)
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)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Beta Barrel
(4804)
Topology
:
Butyryl-CoA Dehydrogenase, subunit A; domain 2
(35)
Homologous Superfamily
:
Butyryl-CoA Dehydrogenase, subunit A, domain 2
(35)
Human (Homo sapiens)
(14)
1a
2wbiA02
A:150-266
1b
2wbiB02
B:150-266
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Pfam Domains
(3, 6)
Info
all PFAM domains
1a: PFAM_Acyl_CoA_dh_1_2wbiB01 (B:266-417)
1b: PFAM_Acyl_CoA_dh_1_2wbiB02 (B:266-417)
2a: PFAM_Acyl_CoA_dh_M_2wbiB03 (B:151-206)
2b: PFAM_Acyl_CoA_dh_M_2wbiB04 (B:151-206)
3a: PFAM_Acyl_CoA_dh_N_2wbiB05 (B:24-147)
3b: PFAM_Acyl_CoA_dh_N_2wbiB06 (B:24-147)
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Clans
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Organisms
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(
)
Clan
:
Acyl-CoA_dh
(32)
Family
:
Acyl-CoA_dh_1
(24)
Homo sapiens (Human)
(10)
1a
Acyl-CoA_dh_1-2wbiB01
B:266-417
1b
Acyl-CoA_dh_1-2wbiB02
B:266-417
Clan
:
no clan defined [family: Acyl-CoA_dh_M]
(24)
Family
:
Acyl-CoA_dh_M
(24)
Homo sapiens (Human)
(10)
2a
Acyl-CoA_dh_M-2wbiB03
B:151-206
2b
Acyl-CoA_dh_M-2wbiB04
B:151-206
Clan
:
no clan defined [family: Acyl-CoA_dh_N]
(23)
Family
:
Acyl-CoA_dh_N
(23)
Homo sapiens (Human)
(10)
3a
Acyl-CoA_dh_N-2wbiB05
B:24-147
3b
Acyl-CoA_dh_N-2wbiB06
B:24-147
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