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2W5G
Asym. Unit
Info
Asym.Unit (51 KB)
Biol.Unit 1 (22 KB)
Biol.Unit 2 (23 KB)
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(1)
Title
:
RNASE A-5'-ATP COMPLEX
Authors
:
G. B. Chavali, D. E. Holloway, M. D. Baker, K. R. Acharya
Date
:
10 Dec 08 (Deposition) - 17 Feb 09 (Release) - 16 Feb 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Endonuclease, Hydrolase, Inhibitor, Nucleotide, Enzyme, Nuclease
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. E. Holloway, G. B. Chavali, D. D. Leonidas, M. D. Baker, K. R. Acharya
Influence Of Naturally-Occurring 5'-Pyrophosphate- Linked Substituents On The Binding Of Adenylic Inhibitors To Ribonuclease A: An X-Ray Crystallographic Study.
Biopolymers V. 91 995 2009
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: ADENOSINE-5'-TRIPHOSPHATE (ATPa)
1b: ADENOSINE-5'-TRIPHOSPHATE (ATPb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
ATP
2
Ligand/Ion
ADENOSINE-5'-TRIPHOSPHATE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LYS A:7 , GLN A:11 , HIS A:12 , LYS A:41 , CYS A:65 , ASN A:67 , GLN A:69 , ASN A:71 , ALA A:109 , HIS A:119 , PHE A:120 , HOH A:2045 , HOH A:2048 , HOH A:2049 , THR B:70
BINDING SITE FOR RESIDUE ATP A1125
2
AC2
SOFTWARE
GLN B:11 , HIS B:12 , LYS B:41 , CYS B:65 , ASN B:67 , GLN B:69 , ASN B:71 , ALA B:109 , GLU B:111 , HIS B:119 , PHE B:120 , HOH B:2013 , HOH B:2063
BINDING SITE FOR RESIDUE ATP B1125
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(1, 2)
Info
All PROSITE Patterns/Profiles
1: RNASE_PANCREATIC (A:40-46,B:40-46)
;
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
RNASE_PANCREATIC
PS00127
Pancreatic ribonuclease family signature.
RNAS1_BOVIN
66-72
2
A:40-46
B:40-46
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Exons
(1, 2)
Info
All Exons
Exon 1.2 (A:1-124 | B:1-124)
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All Exon Boundaries
1: Boundary 1.1/1.2
2: Boundary 1.2/-
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSBTAT00000011586
1
ENSBTAE00000400684
chr10:
25757929-25757973
45
RNAS1_BOVIN
-
0
0
-
-
1.2
ENSBTAT00000011586
2
ENSBTAE00000093931
chr10:
25758709-25759510
802
RNAS1_BOVIN
1-159
159
2
A:1-124
B:1-124
124
124
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2w5ga_ (A:)
1b: SCOP_d2w5gb_ (B:)
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)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
RNase A-like
(356)
Superfamily
:
RNase A-like
(356)
Family
:
Ribonuclease A-like
(347)
Protein domain
:
automated matches
(86)
Cow (Bos taurus) [TaxId: 9913]
(70)
1a
d2w5ga_
A:
1b
d2w5gb_
B:
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CATH Domains
(1, 2)
Info
all CATH domains
1a: CATH_2w5gA00 (A:1-124)
1b: CATH_2w5gB00 (B:1-124)
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)
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)
Homologous Superfamilies
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)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
P-30 Protein
(299)
Homologous Superfamily
:
P-30 Protein
(299)
Cattle (Bos taurus)
(152)
1a
2w5gA00
A:1-124
1b
2w5gB00
B:1-124
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_RnaseA_2w5gB01 (B:1-121)
1b: PFAM_RnaseA_2w5gB02 (B:1-121)
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(
)
Organisms
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)
(
)
Clan
:
no clan defined [family: RnaseA]
(125)
Family
:
RnaseA
(125)
Bos taurus (Bovine)
(107)
1a
RnaseA-2w5gB01
B:1-121
1b
RnaseA-2w5gB02
B:1-121
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Asymmetric Unit 1
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Show PDB file:
Asym.Unit (51 KB)
Header - Asym.Unit
Biol.Unit 1 (22 KB)
Header - Biol.Unit 1
Biol.Unit 2 (23 KB)
Header - Biol.Unit 2
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