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2W52
Asym. Unit
Info
Asym.Unit (65 KB)
Biol.Unit 1 (60 KB)
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(1)
Title
:
2 BETA-GLUCANS (6-O-GLUCOSYL-LAMINARITRIOSE) IN BOTH DONOR AND ACCEPTOR SITES OF GH16 LAMINARINASE 16A FROM PHANEROCHAETE CHRYSOSPORIUM.
Authors
:
J. Vasur, R. Kawai, E. Andersson, K. Igarashi, M. Sandgren, M. Samejima, J. Stahlberg
Date
:
03 Dec 08 (Deposition) - 21 Jul 09 (Release) - 04 Apr 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.56
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Laminarin, Family 16, Extracellular, Beta Sandwich, Basidiomycete, Beta- Glucanase, Glycosyl Hydrolase, 3/1, Gh7, Gh16, Lam16A, Beta-1, 6-Glucan, Hydrolase
(Keyword Search:
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Reference
:
J. Vasur, R. Kawai, E. Andersson, K. Igarashi, M. Sandgren, M. Samejima, J. Stahlberg
X-Ray Crystal Structures Of Phanerochaete Chrysosporium Laminarinase 16A In Complex With Products From Lichenin And Laminarin Hydrolysis
Febs J. V. 276 3858 2009
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Hetero Components
(4, 14)
Info
All Hetero Components
1a: BETA-D-GLUCOSE (BGCa)
1b: BETA-D-GLUCOSE (BGCb)
1c: BETA-D-GLUCOSE (BGCc)
1d: BETA-D-GLUCOSE (BGCd)
1e: BETA-D-GLUCOSE (BGCe)
1f: BETA-D-GLUCOSE (BGCf)
1g: BETA-D-GLUCOSE (BGCg)
2a: BETA-D-MANNOSE (BMAa)
3a: ALPHA-D-MANNOSE (MANa)
3b: ALPHA-D-MANNOSE (MANb)
3c: ALPHA-D-MANNOSE (MANc)
3d: ALPHA-D-MANNOSE (MANd)
4a: N-ACETYL-D-GLUCOSAMINE (NAGa)
4b: N-ACETYL-D-GLUCOSAMINE (NAGb)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
BGC
7
Ligand/Ion
BETA-D-GLUCOSE
2
BMA
1
Ligand/Ion
BETA-D-MANNOSE
3
MAN
4
Ligand/Ion
ALPHA-D-MANNOSE
4
NAG
2
Ligand/Ion
N-ACETYL-D-GLUCOSAMINE
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Sites
(16, 16)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
14: BC5 (SOFTWARE)
15: CAT (AUTHOR)
16: NGL (AUTHOR)
View:
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:43 , ARG A:55 , NAG A:302 , HOH A:2401
BINDING SITE FOR RESIDUE NAG A 301
02
AC2
SOFTWARE
TYR A:46 , NAG A:301 , BMA A:303 , MAN A:304 , MAN A:307
BINDING SITE FOR RESIDUE NAG A 302
03
AC3
SOFTWARE
NAG A:302 , MAN A:304
BINDING SITE FOR RESIDUE BMA A 303
04
AC4
SOFTWARE
NAG A:302 , BMA A:303 , MAN A:305 , MAN A:307 , HOH A:2105 , HOH A:2402
BINDING SITE FOR RESIDUE MAN A 304
05
AC5
SOFTWARE
MAN A:304 , MAN A:306 , HOH A:2390 , HOH A:2403 , HOH A:2404 , HOH A:2405 , HOH A:2406
BINDING SITE FOR RESIDUE MAN A 305
06
AC6
SOFTWARE
ASN A:220 , ASN A:223 , MAN A:305 , HOH A:2408 , HOH A:2409 , HOH A:2411
BINDING SITE FOR RESIDUE MAN A 306
07
AC7
SOFTWARE
SER A:48 , GLY A:49 , ASP A:50 , THR A:51 , NAG A:302 , MAN A:304
BINDING SITE FOR RESIDUE MAN A 307
08
AC8
SOFTWARE
LEU A:62 , SER A:63 , GLY A:161 , BGC A:402 , BGC A:407 , HOH A:2136 , HOH A:2414 , HOH A:2415 , HOH A:2422
BINDING SITE FOR RESIDUE BGC A 401
09
AC9
SOFTWARE
SER A:63 , GLY A:161 , ASP A:256 , GLN A:260 , BGC A:401 , BGC A:403 , BGC A:404 , HOH A:2416 , HOH A:2417 , HOH A:2418
BINDING SITE FOR RESIDUE BGC A 402
10
BC1
SOFTWARE
HIS A:133 , ASN A:162 , ASP A:256 , BGC A:402 , BGC A:404 , BGC A:405 , BGC A:406 , HOH A:2204 , HOH A:2206 , HOH A:2416
BINDING SITE FOR RESIDUE BGC A 403
11
BC2
SOFTWARE
ASN A:152 , TRP A:257 , GLN A:260 , BGC A:402 , BGC A:403 , HOH A:2258 , HOH A:2260 , HOH A:2359 , HOH A:2419
BINDING SITE FOR RESIDUE BGC A 404
12
BC3
SOFTWARE
ARG A:73 , TRP A:103 , TRP A:110 , GLU A:115 , BGC A:403 , BGC A:406 , HOH A:2151 , HOH A:2201 , HOH A:2420 , HOH A:2421
BINDING SITE FOR RESIDUE BGC A 405
13
BC4
SOFTWARE
PRO A:26 , HIS A:28 , ASP A:256 , BGC A:403 , BGC A:405 , BGC A:407 , HOH A:2416
BINDING SITE FOR RESIDUE BGC A 406
14
BC5
SOFTWARE
THR A:59 , THR A:60 , THR A:61 , BGC A:401 , BGC A:406 , HOH A:2422
BINDING SITE FOR RESIDUE BGC A 407
15
CAT
AUTHOR
GLU A:115 , GLU A:120
CATALYTIC RESIDUES GLU 115 AS NUCLEOPHILE AND GLU 120 AS ACID-BASE
16
NGL
AUTHOR
ASN A:43
N-GLYCOSYLATION SITE COVALENTLY LINKED TO NAG A 301
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Glyco_hydro_16_2w52A01 (A:32-163)
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Clan
:
Concanavalin
(293)
Family
:
Glyco_hydro_16
(16)
Phanerochaete chrysosporium (White-rot fungus) (Sporotrichum pruinosum)
(3)
1a
Glyco_hydro_16-2w52A01
A:32-163
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Chain A
Asymmetric Unit 1
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