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2W2J
Biol. Unit 1
Info
Asym.Unit (105 KB)
Biol.Unit 1 (100 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE HUMAN CARBONIC ANHYDRASE RELATED PROTEIN VIII
Authors
:
A. Kramm, J. R. C. Muniz, S. S. Picaud, F. Von Delft, E. S. Pilka, W. W. Yue O. N. F. King, G. Kochan, A. C. W. Pike, P. Filippakopoulos, C. Arrowsmith, M. Wikstrom, A. Edwards, C. Bountra, U. Oppermann
Date
:
31 Oct 08 (Deposition) - 03 Feb 09 (Release) - 22 Feb 12 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.60
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Lyase, Metal-Binding
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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)
Reference
:
S. S. Picaud, J. R. C. Muniz, A. Kramm, E. S. Pilka, G. Kochan, U. Oppermann, W. W. Yue
Crystal Structure Of Human Carbonic Anhydrase- Related Protein Viii Reveals The Basis For Catalytic Silencing.
Proteins V. 76 507 2009
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Hetero Components
(2, 9)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
1c: CHLORIDE ION (CLc)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
2d: GLYCEROL (GOLd)
2e: GLYCEROL (GOLe)
2f: GLYCEROL (GOLf)
3a: UNKNOWN ATOM OR ION (UNXa)
3b: UNKNOWN ATOM OR ION (UNXb)
3c: UNKNOWN ATOM OR ION (UNXc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
GOL
6
Ligand/Ion
GLYCEROL
3
UNX
3
Ligand/Ion
UNKNOWN ATOM OR ION
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Sites
(12, 12)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ARG A:116 , HIS A:118 , HIS A:141
BINDING SITE FOR RESIDUE CL A 401
02
AC2
SOFTWARE
GLU A:32
BINDING SITE FOR RESIDUE CL A 402
03
AC3
SOFTWARE
ARG A:252
BINDING SITE FOR RESIDUE CL A 403
04
AC4
SOFTWARE
GLU A:24 , SER A:56 , TRP A:216 , ARG A:237 , HOH A:2157 , HOH A:2322
BINDING SITE FOR RESIDUE GOL A 501
05
AC5
SOFTWARE
ARG A:125 , GLY A:126 , SER A:127 , ALA A:135 , PHE A:274 , HOH A:2323 , HOH A:2324 , HOH A:2325 , HOH A:2326 , HOH A:2327 , HOH A:2328
BINDING SITE FOR RESIDUE GOL A 502
06
AC6
SOFTWARE
VAL A:98 , GLU A:109 , GLU A:111 , PRO A:279 , HOH A:2164 , HOH A:2329 , HOH A:2330 , HOH A:2331
BINDING SITE FOR RESIDUE GOL A 503
07
AC7
SOFTWARE
GLY A:173 , LYS A:174 , HOH A:2332
BINDING SITE FOR RESIDUE GOL A 504
08
AC8
SOFTWARE
LEU A:149 , HOH A:2158 , HOH A:2159 , HOH A:2169 , HOH A:2333 , HOH A:2334 , HOH A:2335
BINDING SITE FOR RESIDUE GOL A 505
09
AC9
SOFTWARE
SER A:56 , ALA A:59 , ALA A:287 , PHE A:289 , GLN A:290 , HOH A:2049 , HOH A:2336
BINDING SITE FOR RESIDUE GOL A 506
10
BC1
SOFTWARE
ASP A:154 , UNX A:602 , UNX A:603
BINDING SITE FOR RESIDUE UNX A 601
11
BC2
SOFTWARE
UNX A:601
BINDING SITE FOR RESIDUE UNX A 602
12
BC3
SOFTWARE
UNX A:601
BINDING SITE FOR RESIDUE UNX A 603
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_063634 (S100P, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_063634
S
100
P
CAH8_HUMAN
Disease (CMARQ3)
---
A
S
100
P
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: ALPHA_CA_2 (A:27-289)
2: ALPHA_CA_1 (A:127-143)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ALPHA_CA_2
PS51144
Alpha-carbonic anhydrases profile.
CAH8_HUMAN
27-289
1
A:27-289
2
ALPHA_CA_1
PS00162
Alpha-carbonic anhydrases signature.
CAH8_HUMAN
127-143
1
A:127-143
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
View:
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(1, 1)
Info
all CATH domains
1a: CATH_2w2jA00 (A:23-290)
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Classes
(
)
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Architectures
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)
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)
Topologies
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)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
Roll
(3276)
Topology
:
Carbonic Anhydrase II
(332)
Homologous Superfamily
:
Carbonic Anhydrase II
(332)
Human (Homo sapiens)
(309)
1a
2w2jA00
A:23-290
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Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Carb_anhydrase_2w2jA01 (A:29-289)
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Clans
(
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Families
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)
Organisms
(
)
(
)
Clan
:
no clan defined [family: Carb_anhydrase]
(168)
Family
:
Carb_anhydrase
(168)
Homo sapiens (Human)
(157)
1a
Carb_anhydrase-2w2jA01
A:29-289
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Chain A
Asymmetric Unit 1
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