PLEASE WAIT...
Getting 'Biological Unit' information from database.
PLEASE WAIT...
Getting 'Hetero Component' information from database.
PLEASE WAIT...
Getting 'Site' information from database.
PLEASE WAIT...
No precomputed SNP/Variant structure found.
Calculating the structure may take several minutes.
PLEASE WAIT...
Getting 'PROSITE' information from database.
PLEASE WAIT...
Getting 'Exon' information from database.
2W0I
Asym. Unit
Info
Asym.Unit (29 KB)
Biol.Unit 1 (25 KB)
(using Jmol or JSmol)
spin
show selected part
auto zoom/center
Standard Views
(
Basic
|
Advanced
Interface
)
(
Basic
|
Advanced
Interface
)
Help
(1)
Title
:
STRUCTURE OF C-TERMINAL ACTIN DEPOLYMERIZING FACTOR HOMOLOGY (ADF-H) DOMAIN OF HUMAN TWINFILIN-2
Authors
:
J. M. Elkins, A. C. W. Pike, E. Salah, P. Savitsky, J. W. Murray, A. Roos, F. Von Delft, A. Edwards, C. H. Arrowsmith, M. Wikstrom, C. Bountra, S
Date
:
18 Aug 08 (Deposition) - 30 Sep 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.80
Chains
:
Asym. Unit : A
Biol. Unit 1: A (1x)
Keywords
:
Cytoskeleton, Actin-Binding, Actin Binding, Cofilin-Like, Phosphoprotein, Phosphorylation, Transferase, Protein Tyrosine Kinase-9, Actin Depolymerizing Factor
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. M. Elkins, A. C. W. Pike, E. Salah, P. Savitsky, J. W. Murray, A. Roos, F. Von Delft, A. Edwards, C. H. Arrowsmith, M. Wikstrom, C. Bountra, S. Knapp
Structure Of C-Terminal Actin Depolymerizing Factor Homology (Adf-H) Domain Of Human Twinfilin- 2
To Be Published
[
close entry info
]
Hetero Components
(0, 0)
Info
All Hetero Components
View:
Select:
Label:
Sorry, no Info available
[
close Hetero component info
]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(0, 0)
Info
All PROSITE Patterns/Profiles
;
View:
Select:
Label:
End label:
Sorry, no Info available
[
close PROSITE info
]
Exons
(4, 4)
Info
All Exons
Exon 1.6b (A:-1-203)
Exon 1.7 (A:204-254)
Exon 1.8 (A:254-294)
Exon 1.9b (A:295-313)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.5/1.6b
2: Boundary 1.6b/1.7
3: Boundary 1.7/1.8
4: Boundary 1.8/1.9b
5: Boundary 1.9b/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1a
ENST00000305533
1a
ENSE00001931654
chr3:
52273177-52273008
170
TWF2_HUMAN
1-9
9
0
-
-
1.2
ENST00000305533
2
ENSE00001719725
chr3:
52269122-52269045
78
TWF2_HUMAN
9-35
27
0
-
-
1.3b
ENST00000305533
3b
ENSE00001648090
chr3:
52266138-52265960
179
TWF2_HUMAN
35-94
60
0
-
-
1.4
ENST00000305533
4
ENSE00001702468
chr3:
52265555-52265460
96
TWF2_HUMAN
95-126
32
0
-
-
1.5
ENST00000305533
5
ENSE00001661253
chr3:
52265247-52265143
105
TWF2_HUMAN
127-161
35
0
-
-
1.6b
ENST00000305533
6b
ENSE00002169913
chr3:
52265011-52264886
126
TWF2_HUMAN
162-203
42
1
A:-1-203
25
1.7
ENST00000305533
7
ENSE00002193046
chr3:
52264086-52263936
151
TWF2_HUMAN
204-254
51
1
A:204-254
51
1.8
ENST00000305533
8
ENSE00002200058
chr3:
52263798-52263677
122
TWF2_HUMAN
254-294
41
1
A:254-294
41
1.9b
ENST00000305533
9b
ENSE00001125151
chr3:
52263217-52262626
592
TWF2_HUMAN
295-349
55
1
A:295-313
19
[
close EXON info
]
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2w0ia_ (A:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Gelsolin-like
(96)
Superfamily
:
Actin depolymerizing proteins
(88)
Family
:
automated matches
(13)
Protein domain
:
automated matches
(13)
Human (Homo sapiens) [TaxId: 9606]
(3)
1a
d2w0ia_
A:
[
close SCOP info
]
CATH Domains
(0, 0)
Info
all CATH domains
View:
Select:
Label:
Sorry, no Info available
[
close CATH info
]
Pfam Domains
(1, 1)
Info
all PFAM domains
1a: PFAM_Cofilin_ADF_2w0iA01 (A:184-313)
View:
Select:
Label:
Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
ADF
(44)
Family
:
Cofilin_ADF
(21)
Homo sapiens (Human)
(11)
1a
Cofilin_ADF-2w0iA01
A:184-313
[
close Pfam info
]
Atom Selection
(currently selected atoms:
all
)
Protein
Nucleic
Backbone
Sidechain
Hetero
Ligand
Solvent
All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain A
Asymmetric Unit 1
Rendering
(selected part)
Molecule Coloring
(selected part)
by Chain (Asym. Unit)
by Chain (Biol. Unit)
by Secondary Structure
by Atom (CPK)
by SCOP Domain
by CATH Domain
by Pfam Domain
by Asymmetric Unit
by Exon
by Amino Acid
by Nucleotide
by Temperature
by Charge
by Rainbow (Group)
by Custom Color
Background Coloring
Choose
molecule
background
color...
[
close
]
RGB value
(e.g.: "#3cb371" or "60,179,113")
Stereo
Graphics Window
x
pixel
Miscellaneous
Script
Example Commands
Example Command
Action
select :A, :C
select chains 'A' and 'C'
select [ALA]:A
select all 'ALA' residues (Alanines) in chain 'A'
select 5-10
select residue range 5 to 10 in all chains
select 5-10:A
select residue range 5 to 10 in chain 'A'
select protein & not helix & not sheet
select non-helix/non-sheet protein parts
set fontsize 20
set label size to 20 (allowed range: 1-58)
ssbonds 100
show SS bonds with a radius of 100 units (=0.4Å)
wireframe 100
show bonds with a radius of 100 units (=0.4Å)
[
close Script example commands
]
Log
Note:
In this "Basic Interface" any change in the selection of a pulldown menu automatically triggers an action (one-step mechanism).
View and selection are coupled in the structure specific controls (e.g. "Hetero","PROSITE") .
Note:
In this "Advanced Interface" any change in the selection of a pulldown menu only sets the target for the corresponding control buttons (two-step mechanism).
View and selection are set independently in the structure specific controls (e.g. "Hetero","PROSITE") .
QuickSearch:
by PDB,NDB,UniProt,PROSITE Code or
Search Term(s)
Show PDB file:
Asym.Unit (29 KB)
Header - Asym.Unit
Biol.Unit 1 (25 KB)
Header - Biol.Unit 1
Plain Text
HTML (compressed size)
use JSmol [Javascript]
use Jmol [Java applet]
Upload:
Select a local file
OR
Enter a remote file address
You can upload any molecular structure file format that is recognized by Jmol,
e.g.: PDB, mmCif, CIF, CML, MOL, XYZ
(also compressed with 'gzip', see the
Jmol documentation
for a complete list)
JenaLib Atlas Page
|
Sequence/Alignment View
2W0I
Jmol Script Commands
|
Jmol Color Schemes
|
Jmol Mouse Manual
|
Jmol Wiki
controls:
collapse
expand
Home
JenaLib
Jmol Scripting
Contact
Help
