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2VVR
Asym. Unit
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Asym.Unit (141 KB)
Biol.Unit 1 (49 KB)
Biol.Unit 2 (49 KB)
Biol.Unit 3 (49 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE H99N MUTANT OF RIBOSE-5-PHOSPHATE ISOMERASE B FROM E. COLI SOAKED WITH RIBOSE 5-PHOSPHATE
Authors
:
A. K. Roos, S. L. Mowbray
Date
:
11 Jun 08 (Deposition) - 08 Jul 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B,C,D,E,F
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Biol. Unit 3: E,F (1x)
Keywords
:
Rpib, Isomerase, Carbohydrate Metabolism, Pentose Phosphate Pathway
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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Reference
:
A. K. Roos, S. Mariano, E. Kowalinski, L. Salmon, S. L. Mowbray
D-Ribose-5-Phosphate Isomerase B From Escherichia Coli Is Also A Functional D-Allose-6-Phosphate Isomerase, While The Mycobacterium Tuberculosis Enzyme Is Not.
J. Mol. Biol. V. 382 667 2008
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Hetero Components
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Sites
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 6)
Info
All SCOP Domains
1a: SCOP_d2vvra_ (A:)
1b: SCOP_d2vvrb_ (B:)
1c: SCOP_d2vvrc_ (C:)
1d: SCOP_d2vvrd_ (D:)
1e: SCOP_d2vvre_ (E:)
1f: SCOP_d2vvrf_ (F:)
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Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Ribose/Galactose isomerase RpiB/AlsB
(27)
Superfamily
:
Ribose/Galactose isomerase RpiB/AlsB
(27)
Family
:
automated matches
(15)
Protein domain
:
automated matches
(15)
Escherichia coli K-12 [TaxId: 83333]
(1)
1a
d2vvra_
A:
1b
d2vvrb_
B:
1c
d2vvrc_
C:
1d
d2vvrd_
D:
1e
d2vvre_
E:
1f
d2vvrf_
F:
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CATH Domains
(1, 6)
Info
all CATH domains
1a: CATH_2vvrA00 (A:1-147)
1b: CATH_2vvrC00 (C:1-147)
1c: CATH_2vvrE00 (E:1-147)
1d: CATH_2vvrB00 (B:1-146)
1e: CATH_2vvrD00 (D:1-146)
1f: CATH_2vvrF00 (F:1-146)
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Ribose 5-phosphate Isomerase B; Chain: A,
(13)
Homologous Superfamily
:
[code=3.40.1400.10, no name defined]
(13)
Escherichia coli. Organism_taxid: 83333. Strain: k12.
(1)
1a
2vvrA00
A:1-147
1b
2vvrC00
C:1-147
1c
2vvrE00
E:1-147
1d
2vvrB00
B:1-146
1e
2vvrD00
D:1-146
1f
2vvrF00
F:1-146
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Pfam Domains
(1, 6)
Info
all PFAM domains
1a: PFAM_LacAB_rpiB_2vvrF01 (F:3-142)
1b: PFAM_LacAB_rpiB_2vvrF02 (F:3-142)
1c: PFAM_LacAB_rpiB_2vvrF03 (F:3-142)
1d: PFAM_LacAB_rpiB_2vvrF04 (F:3-142)
1e: PFAM_LacAB_rpiB_2vvrF05 (F:3-142)
1f: PFAM_LacAB_rpiB_2vvrF06 (F:3-142)
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Clan
:
no clan defined [family: LacAB_rpiB]
(12)
Family
:
LacAB_rpiB
(12)
Escherichia coli (strain K12)
(2)
1a
LacAB_rpiB-2vvrF01
F:3-142
1b
LacAB_rpiB-2vvrF02
F:3-142
1c
LacAB_rpiB-2vvrF03
F:3-142
1d
LacAB_rpiB-2vvrF04
F:3-142
1e
LacAB_rpiB-2vvrF05
F:3-142
1f
LacAB_rpiB-2vvrF06
F:3-142
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Asym.Unit (141 KB)
Header - Asym.Unit
Biol.Unit 1 (49 KB)
Header - Biol.Unit 1
Biol.Unit 2 (49 KB)
Header - Biol.Unit 2
Biol.Unit 3 (49 KB)
Header - Biol.Unit 3
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