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2VSI
Asym. Unit
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Asym.Unit (159 KB)
Biol.Unit 1 (153 KB)
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(1)
Title
:
SYNTHESIS OF CDP-ACTIVATED RIBITOL FOR TEICHOIC ACID PRECURSORS IN STREPTOCOCCUS PNEUMONIAE
Authors
:
S. Baur, J. Marles-Wright, S. Buckenmaier, R. J. Lewis, W. Vollmer
Date
:
23 Apr 08 (Deposition) - 30 Dec 08 (Release) - 10 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.75
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Spr1149 Tari Cdp Ribitol Streptococcus Pneumoniae, Nucleotidyltransferase, Transferase, Isoprene Biosynthesis
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Reference
:
S. Baur, J. Marles-Wright, S. Buckenmaier, R. J. Lewis, W. Vollmer
Synthesis Of Cdp-Activated Ribitol For Teichoic Acid Precursors In Streptococcus Pneumoniae.
J. Bacteriol. V. 191 1200 2009
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Hetero Components
(2, 3)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
2a: 4-AMINO-1-{5-O-[(R)-HYDROXY(PHOSPH... (CDFa)
2b: 4-AMINO-1-{5-O-[(R)-HYDROXY(PHOSPH... (CDFb)
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No.
Name
Count
Type
Full Name
1
CA
1
Ligand/Ion
CALCIUM ION
2
CDF
2
Ligand/Ion
4-AMINO-1-{5-O-[(R)-HYDROXY(PHOSPHONOOXY)PHOSPHORYL]-ALPHA-D-ARABINOFURANOSYL}PYRIMIDIN-2(1H)-ONE
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Sites
(3, 3)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
LEU A:7 , ALA A:8 , GLY A:9 , GLY A:10 , GLY A:82 , ALA A:83 , ASP A:84 , ARG A:85 , SER A:88 , ASP A:112 , SER A:113 , VAL A:114 , LYS A:218
BINDING SITE FOR RESIDUE CDF A1234
2
AC2
SOFTWARE
LEU B:7 , ALA B:8 , GLY B:9 , GLN B:23 , GLY B:82 , ALA B:83 , ASP B:84 , ARG B:85 , SER B:88 , ASP B:112 , SER B:113 , VAL B:114 , LYS B:218 , THR B:220
BINDING SITE FOR RESIDUE CDF B1233
3
AC3
SOFTWARE
GLU B:105
BINDING SITE FOR RESIDUE CA B1234
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PROSITE Patterns/Profiles
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1: ISPD (A:108-115,B:108-115)
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
ISPD
PS01295
4-diphosphocytidyl-2C-methyl-D-erythritol synthase signature.
TARI_STRR6
108-115
2
A:108-115
B:108-115
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Exons
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SCOP Domains
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1a: SCOP_d2vsia_ (A:)
1b: SCOP_d2vsib_ (B:)
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Class
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Alpha and beta proteins (a/b)
(23833)
Fold
:
Nucleotide-diphospho-sugar transferases
(408)
Superfamily
:
Nucleotide-diphospho-sugar transferases
(408)
Family
:
automated matches
(48)
Protein domain
:
automated matches
(48)
Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]
(2)
1a
d2vsia_
A:
1b
d2vsib_
B:
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CATH Domains
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Asymmetric Unit 1
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