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2VRS
Asym. Unit
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Asym.Unit (122 KB)
Biol.Unit 1 (116 KB)
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(1)
Title
:
STRUCTURE OF AVIAN REOVIRUS SIGMA C 117-326, C2 CRYSTAL FORM
Authors
:
P. Guardado-Calvo, G. C. Fox, A. L. Llamas-Saiz, J. Benavente, M. J. Van Raaij
Date
:
14 Apr 08 (Deposition) - 13 Jan 09 (Release) - 15 Sep 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.75
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (1x)
Keywords
:
Alpha-Helical Coiled Coil, Receptor-Binding, Triple Beta-Spiral, Viral Protein, Virion, Coiled Coil, Beta-Barrel
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
P. Guardado-Calvo, G. C. Fox, A. L. Llamas-Saiz, M. J. Van Raaij
Crystallographic Structure Of The Alpha-Helical Triple Coiled-Coil Domain Of Avian Reovirus S1133 Fibre.
J. Gen. Virol. V. 90 672 2009
(for further references see the
PDB file header
)
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Hetero Components
(4, 13)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: GLYCEROL (GOLa)
2b: GLYCEROL (GOLb)
2c: GLYCEROL (GOLc)
3a: SULFATE ION (SO4a)
4a: ZINC ION (ZNa)
4b: ZINC ION (ZNb)
4c: ZINC ION (ZNc)
4d: ZINC ION (ZNd)
4e: ZINC ION (ZNe)
4f: ZINC ION (ZNf)
4g: ZINC ION (ZNg)
View:
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Label:
No.
Name
Count
Type
Full Name
1
CL
2
Ligand/Ion
CHLORIDE ION
2
GOL
3
Ligand/Ion
GLYCEROL
3
SO4
1
Ligand/Ion
SULFATE ION
4
ZN
7
Ligand/Ion
ZINC ION
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Sites
(13, 13)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC3 (SOFTWARE)
04: AC4 (SOFTWARE)
05: AC5 (SOFTWARE)
06: AC6 (SOFTWARE)
07: AC7 (SOFTWARE)
08: AC8 (SOFTWARE)
09: AC9 (SOFTWARE)
10: BC1 (SOFTWARE)
11: BC2 (SOFTWARE)
12: BC3 (SOFTWARE)
13: BC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
ASN A:138 , ASN B:138 , ASN C:138
BINDING SITE FOR RESIDUE CL C 1327
02
AC2
SOFTWARE
ASN A:124 , ASN B:124 , ASN C:124
BINDING SITE FOR RESIDUE CL C 1328
03
AC3
SOFTWARE
LYS B:150 , ALA B:261 , ARG B:299 , HOH B:2302 , HOH B:2303 , HOH B:2304
BINDING SITE FOR RESIDUE GOL B 1327
04
AC4
SOFTWARE
LEU A:260 , ALA A:261 , VAL A:264 , ARG A:299 , HOH A:2319 , HOH A:2348 , HOH A:2349
BINDING SITE FOR RESIDUE GOL A 1327
05
AC5
SOFTWARE
THR B:143 , ASP B:147 , LEU B:250 , SER B:251 , LEU B:260 , ARG B:299 , HOH B:2227
BINDING SITE FOR RESIDUE GOL B 1328
06
AC6
SOFTWARE
HIS A:158 , HOH A:2350 , HIS B:158 , HIS C:158
BINDING SITE FOR RESIDUE ZN A 1328
07
AC7
SOFTWARE
ASP A:144 , HOH A:2351 , HIS B:255 , HIS C:255
BINDING SITE FOR RESIDUE ZN A 1329
08
AC8
SOFTWARE
ASP A:134 , ARG B:201 , ASP B:215
BINDING SITE FOR RESIDUE ZN A 1330
09
AC9
SOFTWARE
HIS A:287 , TYR A:289 , HOH A:2352 , ASP C:122
BINDING SITE FOR RESIDUE ZN A 1331
10
BC1
SOFTWARE
ASP B:122 , HIS C:287 , TYR C:289
BINDING SITE FOR RESIDUE ZN C 1329
11
BC2
SOFTWARE
ASP A:122 , HIS B:287 , TYR B:289 , HOH B:2306
BINDING SITE FOR RESIDUE ZN B 1329
12
BC3
SOFTWARE
ASP A:212 , THR A:213
BINDING SITE FOR RESIDUE ZN A 1332
13
BC4
SOFTWARE
SER A:137 , LEU A:140 , GLN B:199 , PHE B:200 , ARG B:201 , HIS B:255 , HOH B:2148
BINDING SITE FOR RESIDUE SO4 B 1330
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
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PROSITE Patterns/Profiles
(0, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
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CATH Domains
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all CATH domains
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_Reo_sigmaC_2vrsC01 (C:117-326)
1b: PFAM_Reo_sigmaC_2vrsC02 (C:117-326)
1c: PFAM_Reo_sigmaC_2vrsC03 (C:117-326)
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Organisms
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)
Clan
:
Reo_sigma
(16)
Family
:
Reo_sigmaC
(2)
Avian reovirus (strain S1133) (ARV)
(2)
1a
Reo_sigmaC-2vrsC01
C:117-326
1b
Reo_sigmaC-2vrsC02
C:117-326
1c
Reo_sigmaC-2vrsC03
C:117-326
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Asymmetric Unit 1
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Asym.Unit (122 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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