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Asym. Unit
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Asym.Unit (1.7 MB)
Biol.Unit 1, α-C (1.7 MB)
Biol.Unit 1 (1.7 MB)
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(1)
Title
:
STRUCTURE OF THE CERULENIN-INHIBITED FUNGAL FATTY ACID SYNTHASE TYPE I MULTIENZYME COMPLEX
Authors
:
P. Johansson, B. Wiltschi, P. Kumari, B. Kessler, C. Vonrhein, J. Vonck D. Oesterhelt, M. Grininger
Date
:
07 Jan 08 (Deposition) - 12 Aug 08 (Release) - 21 Jun 17 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
4.00
Chains
:
Asym. Unit : A,B,C,G,H,I
Biol. Unit 1: A,B,C,G,H,I (1x)
Keywords
:
Transferase, Phosphorylation, Phosphopantetheine, Fatty Acid Synthase, Multifunctional Enzyme, Oxidoreductase, Lipid Synthesis, Fas, Nad, Nadp, Lyase, Cerulenin, Hydrolase, Fatty Acid Biosynthesis
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
P. Johansson, B. Wiltschi, P. Kumari, B. Kessler, C. Vonrhein, J. Vonck, D. Oesterhelt, M. Grininger
Inhibition Of The Fungal Fatty Acid Synthase Type I Multienzyme Complex.
Proc. Natl. Acad. Sci. Usa V. 105 12803 2008
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRAN... (CERa)
1b: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRAN... (CERb)
1c: (2S, 3R)-3-HYDROXY-4-OXO-7,10-TRAN... (CERc)
2a: FLAVIN MONONUCLEOTIDE (FMNa)
2b: FLAVIN MONONUCLEOTIDE (FMNb)
2c: FLAVIN MONONUCLEOTIDE (FMNc)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CER
3
Ligand/Ion
(2S, 3R)-3-HYDROXY-4-OXO-7,10-TRANS,TRANS-DODECADIENAMIDE
2
FMN
3
Ligand/Ion
FLAVIN MONONUCLEOTIDE
[
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
PRO G:595 , GLY G:596 , MET G:597 , THR G:598 , PRO G:599 , ASN G:650 , GLY G:682 , LYS G:706 , THR G:733 , GLY G:737 , GLY G:738 , SER G:769 , GLY G:770 , GLY G:802 , SER G:803 , MET G:806 , LEU G:1054 , ALA G:1059
BINDING SITE FOR RESIDUE FMN G3051
2
AC2
SOFTWARE
PRO H:595 , GLY H:596 , MET H:597 , THR H:598 , PRO H:599 , ASN H:650 , ILE H:652 , GLY H:682 , LYS H:706 , THR H:733 , GLY H:737 , GLY H:738 , SER H:769 , GLY H:770 , GLY H:802 , SER H:803 , LEU H:1054 , ALA H:1059
BINDING SITE FOR RESIDUE FMN H3051
3
AC3
SOFTWARE
PRO I:595 , GLY I:596 , MET I:597 , THR I:598 , ASN I:650 , ILE I:652 , GLY I:682 , LYS I:706 , THR I:733 , GLY I:737 , GLY I:738 , GLY I:739 , SER I:769 , GLY I:770 , GLY I:802 , SER I:803 , LEU I:1054 , ALA I:1059
BINDING SITE FOR RESIDUE FMN I3051
4
AC4
SOFTWARE
PHE A:1279 , ALA A:1304 , CYS A:1305 , PHE A:1343 , HIS A:1542 , HIS A:1583 , LYS A:1585 , PHE A:1644 , PHE A:1646
BINDING SITE FOR RESIDUE CER A2748
5
AC5
SOFTWARE
CYS B:1305 , PHE B:1343 , HIS B:1542 , HIS B:1583 , LYS B:1585 , PHE B:1644 , PHE B:1646 , PHE C:1279
BINDING SITE FOR RESIDUE CER B2748
6
AC6
SOFTWARE
PHE B:1279 , ALA C:1304 , CYS C:1305 , PHE C:1343 , HIS C:1542 , HIS C:1583 , LYS C:1585 , PHE C:1644 , PHE C:1646
BINDING SITE FOR RESIDUE CER C2748
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
View:
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Label:
Sorry, no Info available
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PROSITE Patterns/Profiles
(3, 9)
Info
All PROSITE Patterns/Profiles
1: CARRIER (A:145-220,B:145-220,C:145-220)
2: PHOSPHOPANTETHEINE (A:175-190,B:175-190,C:175-190)
3: B_KETOACYL_SYNTHASE (A:1296-1312,B:1296-1312,C:1296-131...)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CARRIER
PS50075
Carrier protein (CP) domain profile.
FAS2_YEAST
145-220
3
A:145-220
B:145-220
C:145-220
2
PHOSPHOPANTETHEINE
PS00012
Phosphopantetheine attachment site.
FAS2_YEAST
175-190
3
A:175-190
B:175-190
C:175-190
3
B_KETOACYL_SYNTHASE
PS00606
Beta-ketoacyl synthases active site.
FAS2_YEAST
1296-1312
3
A:1296-1312
B:1296-1312
C:1296-1312
[
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Exons
(2, 6)
Info
All Exons
Exon 1.1 (G:5-2050 (gaps) | H:5-2050 (gaps) ...)
Exon 2.1 (A:1-1747 (gaps) | B:1-1747 (gaps) ...)
View:
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All Exon Boundaries
1: Boundary -/1.1
2: Boundary 1.1/-
3: Boundary -/2.1
4: Boundary 2.1/-
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
YKL182W
1
YKL182W.1
XI:100676-106831
6156
FAS1_YEAST
1-2051
2051
3
G:5-2050 (gaps)
H:5-2050 (gaps)
I:5-2050 (gaps)
2046
2046
2046
2.1
YPL231W
1
YPL231W.1
XVI:108652-114315
5664
FAS2_YEAST
1-1887
1887
3
A:1-1747 (gaps)
B:1-1747 (gaps)
C:1-1747 (gaps)
1747
1747
1747
[
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SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(7, 21)
Info
all PFAM domains
1a: PFAM_MaoC_dehydratas_2vkzI01 (I:1522-1650)
1b: PFAM_MaoC_dehydratas_2vkzI02 (I:1522-1650)
1c: PFAM_MaoC_dehydratas_2vkzI03 (I:1522-1650)
2a: PFAM_zf_MaoC_2vkzI04 (I:1282-1406)
2b: PFAM_zf_MaoC_2vkzI05 (I:1282-1406)
2c: PFAM_zf_MaoC_2vkzI06 (I:1282-1406)
3a: PFAM_adh_short_C2_2vkzC01 (C:682-931)
3b: PFAM_adh_short_C2_2vkzC02 (C:682-931)
3c: PFAM_adh_short_C2_2vkzC03 (C:682-931)
4a: PFAM_Acyl_transf_1_2vkzI07 (I:1663-2037)
4b: PFAM_Acyl_transf_1_2vkzI08 (I:1663-2037)
4c: PFAM_Acyl_transf_1_2vkzI09 (I:1663-2037)
5a: PFAM_Ketoacyl_synt_C_2vkzC04 (C:1496-1612)
5b: PFAM_Ketoacyl_synt_C_2vkzC05 (C:1496-1612)
5c: PFAM_Ketoacyl_synt_C_2vkzC06 (C:1496-1612)
6a: PFAM_ketoacyl_synt_2vkzC07 (C:1158-1393)
6b: PFAM_ketoacyl_synt_2vkzC08 (C:1158-1393)
6c: PFAM_ketoacyl_synt_2vkzC09 (C:1158-1393)
7a: PFAM_DUF1729_2vkzI10 (I:1018-1074)
7b: PFAM_DUF1729_2vkzI11 (I:1018-1074)
7c: PFAM_DUF1729_2vkzI12 (I:1018-1074)
View:
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Clans
(
)
(
)
Families
(
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(
)
Organisms
(
)
(
)
Clan
:
HotDog
(52)
Family
:
MaoC_dehydratas
(6)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
1a
MaoC_dehydratas-2vkzI01
I:1522-1650
1b
MaoC_dehydratas-2vkzI02
I:1522-1650
1c
MaoC_dehydratas-2vkzI03
I:1522-1650
Family
:
zf-MaoC
(3)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
2a
zf-MaoC-2vkzI04
I:1282-1406
2b
zf-MaoC-2vkzI05
I:1282-1406
2c
zf-MaoC-2vkzI06
I:1282-1406
Clan
:
NADP_Rossmann
(1239)
Family
:
adh_short_C2
(98)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
3a
adh_short_C2-2vkzC01
C:682-931
3b
adh_short_C2-2vkzC02
C:682-931
3c
adh_short_C2-2vkzC03
C:682-931
Clan
:
Patatin
(10)
Family
:
Acyl_transf_1
(9)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
4a
Acyl_transf_1-2vkzI07
I:1663-2037
4b
Acyl_transf_1-2vkzI08
I:1663-2037
4c
Acyl_transf_1-2vkzI09
I:1663-2037
Clan
:
Thiolase
(72)
Family
:
Ketoacyl-synt_C
(19)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
5a
Ketoacyl-synt_C-2vkzC04
C:1496-1612
5b
Ketoacyl-synt_C-2vkzC05
C:1496-1612
5c
Ketoacyl-synt_C-2vkzC06
C:1496-1612
Family
:
ketoacyl-synt
(19)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
6a
ketoacyl-synt-2vkzC07
C:1158-1393
6b
ketoacyl-synt-2vkzC08
C:1158-1393
6c
ketoacyl-synt-2vkzC09
C:1158-1393
Clan
:
no clan defined [family: DUF1729]
(2)
Family
:
DUF1729
(2)
Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (Bakers yeast)
(2)
7a
DUF1729-2vkzI10
I:1018-1074
7b
DUF1729-2vkzI11
I:1018-1074
7c
DUF1729-2vkzI12
I:1018-1074
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