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2VGO
Biol. Unit 1
Info
Asym.Unit (125 KB)
Biol.Unit 1 (61 KB)
Biol.Unit 2 (62 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF AURORA B KINASE IN COMPLEX WITH REVERSINE INHIBITOR
Authors
:
A. M. D'Alise, G. Amabile, M. Iovino, F. P. Di Giorgio, M. Bartiromo, F. Sessa, F. Villa, A. Musacchio, R. Cortese
Date
:
15 Nov 07 (Deposition) - 28 Oct 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Keywords
:
Nucleotide-Binding, Serine/Threonine-Protein Kinase, Atp-Binding, Transferase, Coiled Coil, Cell Division, Kinase, Cancer, Incenp, Nucleus, Mitosis, Aurora B, Metal-Binding, Aminothiazole, Phosphorylation, Magnesium, Cell Cycle, Centromere, Microtubule
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. M. D'Alise, G. Amabile, M. Iovino, F. P. Di Giorgio, M. Bartiromo, F. Sessa, F. Villa, A. Musacchio, R. Cortese
Reversine, A Novel Aurora Kinases Inhibitor, Inhibits Colony Formation Of Human Acute Myeloid Leukemia Cells.
Mol. Cancer Ther. V. 7 1140 2008
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: N~6~-CYCLOHEXYL-N~2~-(4-MORPHOLIN-... (AD5a)
1b: N~6~-CYCLOHEXYL-N~2~-(4-MORPHOLIN-... (AD5b)
2a: PHOSPHOTHREONINE (TPOa)
2b: PHOSPHOTHREONINE (TPOb)
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No.
Name
Count
Type
Full Name
1
AD5
1
Ligand/Ion
N~6~-CYCLOHEXYL-N~2~-(4-MORPHOLIN-4-YLPHENYL)-9H-PURINE-2,6-DIAMINE
2
TPO
1
Mod. Amino Acid
PHOSPHOTHREONINE
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Sites
(1, 1)
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All Sites
1: AC1 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLY A:100 , ALA A:120 , LEU A:154 , LEU A:170 , GLU A:171 , PHE A:172 , ALA A:173 , GLY A:176 , GLU A:177
BINDING SITE FOR RESIDUE AD5 A1357
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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Sorry, no Info available
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:99-122)
2: PROTEIN_KINASE_ST (A:212-224)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
AUKBA_XENLA
99-122
1
A:99-122
-
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
AUKBA_XENLA
212-224
1
A:212-224
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2vgoa_ (A:)
1b: SCOP_d2vgob_ (B:)
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Protein Domains
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Organisms
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(
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Class
:
Alpha and beta proteins (a+b)
(23004)
Fold
:
Protein kinase-like (PK-like)
(2589)
Superfamily
:
Protein kinase-like (PK-like)
(2589)
Family
:
Protein kinases, catalytic subunit
(1977)
Protein domain
:
automated matches
(542)
African clawed frog (Xenopus laevis) [TaxId: 8355]
(9)
1a
d2vgoa_
A:
1b
d2vgob_
B:
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CATH Domains
(2, 4)
Info
all CATH domains
1a: CATH_2vgoB01 (B:88-176)
1b: CATH_2vgoA01 (A:87-173)
2a: CATH_2vgoA02 (A:174-347)
2b: CATH_2vgoB02 (B:177-346)
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Organisms
(
)
(
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
African clawed frog (Xenopus laevis)
(3)
1a
2vgoB01
B:88-176
1b
2vgoA01
A:87-173
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
African clawed frog (Xenopus laevis)
(3)
2a
2vgoA02
A:174-347
2b
2vgoB02
B:177-346
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Pkinase_2vgoB01 (B:93-343)
1b: PFAM_Pkinase_2vgoB02 (B:93-343)
2a: PFAM_INCENP_ARK_bind_2vgoD01 (D:798-839)
2b: PFAM_INCENP_ARK_bind_2vgoD02 (D:798-839)
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)
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Xenopus laevis (African clawed frog)
(5)
1a
Pkinase-2vgoB01
B:93-343
1b
Pkinase-2vgoB02
B:93-343
Clan
:
no clan defined [family: INCENP_ARK-bind]
(3)
Family
:
INCENP_ARK-bind
(3)
Xenopus laevis (African clawed frog)
(3)
2a
INCENP_ARK-bind-2vgoD01
D:798-839
2b
INCENP_ARK-bind-2vgoD02
D:798-839
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Asymmetric Unit 1
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Asym.Unit (125 KB)
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