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2VE3
Biol. Unit 1
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Asym.Unit (152 KB)
Biol.Unit 1 (76 KB)
Biol.Unit 2 (73 KB)
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(1)
Title
:
RETINOIC ACID BOUND CYANOBACTERIAL CYP120A1
Authors
:
K. Kuhnel, N. Ke, S. G. Sligar, M. A. Schuler, I. Schlichting
Date
:
15 Oct 07 (Deposition) - 29 Apr 08 (Release) - 16 Mar 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.10
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Oxidoreductase, Monooxygenase, Metal-Binding, Heme, Iron
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
K. Kuhnel, N. Ke, M. J. Cryle, S. G. Sligar, M. A. Schuler, I. Schlichting
Crystal Structures Of Substrate-Free And Retinoic Acid-Bound Cyanobacterial Cytochrome P450 Cyp120A1.
Biochemistry V. 47 6552 2008
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: PROTOPORPHYRIN IX CONTAINING FE (HEMa)
1b: PROTOPORPHYRIN IX CONTAINING FE (HEMb)
2a: RETINOIC ACID (REAa)
2b: RETINOIC ACID (REAb)
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No.
Name
Count
Type
Full Name
1
HEM
1
Ligand/Ion
PROTOPORPHYRIN IX CONTAINING FE
2
REA
1
Ligand/Ion
RETINOIC ACID
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:101 , ARG A:105 , PHE A:159 , LEU A:250 , LEU A:251 , ALA A:254 , GLY A:255 , THR A:258 , LEU A:259 , PRO A:317 , VAL A:318 , ARG A:323 , TYR A:344 , ILE A:346 , PRO A:383 , PHE A:384 , GLY A:385 , ARG A:389 , CYS A:391 , GLY A:393 , PHE A:396 , ALA A:397 , REA A:1445 , HOH A:2146 , HOH A:2173
BINDING SITE FOR RESIDUE HEM A1444
2
AC2
SOFTWARE
PHE A:29 , PHE A:182 , THR A:258 , GLY A:319 , GLY A:320 , GLN A:345 , HEM A:1444
BINDING SITE FOR RESIDUE REA A1445
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
(1, 1)
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All PROSITE Patterns/Profiles
1: CYTOCHROME_P450 (A:384-393)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
CYTOCHROME_P450
PS00086
Cytochrome P450 cysteine heme-iron ligand signature.
CP120_SYNY3
384-393
1
A:384-393
-
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2ve3a_ (A:)
1b: SCOP_d2ve3b_ (B:)
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Class
:
All alpha proteins
(14657)
Fold
:
Cytochrome P450
(480)
Superfamily
:
Cytochrome P450
(480)
Family
:
automated matches
(157)
Protein domain
:
automated matches
(157)
Synechocystis sp. [TaxId: 1148]
(2)
1a
d2ve3a_
A:
1b
d2ve3b_
B:
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CATH Domains
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Pfam Domains
(1, 2)
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all PFAM domains
1a: PFAM_p450_2ve3B01 (B:14-440)
1b: PFAM_p450_2ve3B02 (B:14-440)
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Clan
:
no clan defined [family: p450]
(161)
Family
:
p450
(161)
Synechocystis sp. (strain ATCC 27184 / PCC 6803 / N-1)
(2)
1a
p450-2ve3B01
B:14-440
1b
p450-2ve3B02
B:14-440
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Asymmetric Unit 1
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Asym.Unit (152 KB)
Header - Asym.Unit
Biol.Unit 1 (76 KB)
Header - Biol.Unit 1
Biol.Unit 2 (73 KB)
Header - Biol.Unit 2
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