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2VAS
Asym. Unit
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Asym.Unit (153 KB)
Biol.Unit 1 (146 KB)
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(1)
Title
:
MYOSIN VI (MD-INSERT2-CAM, DELTA-INSERT1) POST-RIGOR STATE
Authors
:
J. Menetrey, P. Llinas, J. Cicolari, G. Squires, X. Liu, A. Li, H. L. Sweeney, A. Houdusse
Date
:
04 Sep 07 (Deposition) - 11 Dec 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.40
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (1x)
Keywords
:
Calmodulin-Binding, Nucleotide-Binding, Transport, Calmodulin, Endocytosis, Mg. Adp. Befx, Cam, Myosin, Nucleus, Membrane, Myosin Vi, Cytoplasm, Golgi Apparatus, Phosphorylation, Molecular Motor, Atp-Binding, Coiled Coil, Actin-Binding, Motor Protein, Post-Rigor State, Protein Transport
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
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)
Reference
:
J. Menetrey, P. Llinas, J. Cicolari, G. Squires, X. Liu, A. Li, H. L. Sweeney, A. Houdusse
The Post-Rigor Structure Of Myosin Vi And Implications For The Recovery Stroke.
Embo J. V. 27 244 2008
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Hetero Components
(4, 7)
Info
All Hetero Components
1a: ADENOSINE-5'-DIPHOSPHATE (ADPa)
2a: BERYLLIUM TRIFLUORIDE ION (BEFa)
3a: CALCIUM ION (CAa)
3b: CALCIUM ION (CAb)
3c: CALCIUM ION (CAc)
3d: CALCIUM ION (CAd)
4a: MAGNESIUM ION (MGa)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ADP
1
Ligand/Ion
ADENOSINE-5'-DIPHOSPHATE
2
BEF
1
Ligand/Ion
BERYLLIUM TRIFLUORIDE ION
3
CA
4
Ligand/Ion
CALCIUM ION
4
MG
1
Ligand/Ion
MAGNESIUM ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASN A:98 , TYR A:100 , PHE A:101 , TYR A:107 , GLU A:152 , GLY A:154 , ALA A:155 , GLY A:156 , LYS A:157 , THR A:158 , GLU A:159 , PHE A:163 , ASN A:200 , BEF A:999 , MG A:1000 , HOH A:1001 , HOH A:1002 , HOH A:2047 , HOH A:2048 , HOH A:2145
BINDING SITE FOR RESIDUE ADP A 998
2
AC2
SOFTWARE
SER A:153 , GLY A:154 , LYS A:157 , ASN A:200 , SER A:203 , SER A:204 , ADP A:998 , MG A:1000 , HOH A:1001 , HOH A:1002
BINDING SITE FOR RESIDUE BEF A 999
3
AC3
SOFTWARE
THR A:158 , SER A:204 , ADP A:998 , BEF A:999 , HOH A:1001 , HOH A:1002
BINDING SITE FOR RESIDUE MG A1000
4
AC4
SOFTWARE
ASP B:20 , ASP B:22 , ASP B:24 , THR B:26
BINDING SITE FOR RESIDUE CA B1148
5
AC5
SOFTWARE
ASP B:56 , ASP B:58 , ASN B:60 , THR B:62
BINDING SITE FOR RESIDUE CA B1149
6
AC6
SOFTWARE
ASP B:93 , ASP B:95 , ASN B:97 , PHE B:99 , GLU B:104
BINDING SITE FOR RESIDUE CA B1150
7
AC7
SOFTWARE
ASP B:129 , ASP B:131 , ASP B:133 , GLN B:135 , GLU B:140
BINDING SITE FOR RESIDUE CA B1151
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are not available)
All SNPs/Variants
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PROSITE Patterns/Profiles
(3, 9)
Info
All PROSITE Patterns/Profiles
1: EF_HAND_2 (B:7-42|B:43-78|B:80-115|B:116-147)
2: EF_HAND_1 (B:20-32|B:56-68|B:93-105|B:129-141)
3: MYOSIN_MOTOR (A:57-771)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
EF_HAND_2
PS50222
EF-hand calcium-binding domain profile.
CALM_DROME
8-43
44-79
81-116
117-149
4
B:7-42
B:43-78
B:80-115
B:116-147
2
EF_HAND_1
PS00018
EF-hand calcium-binding domain.
CALM_DROME
21-33
57-69
94-106
130-142
4
B:20-32
B:56-68
B:93-105
B:129-141
3
MYOSIN_MOTOR
PS51456
Myosin motor domain profile.
MYO6_PIG
57-772
1
A:57-771
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Exons
(0, 0)
Info
All Exons
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All Exon Boundaries
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 1)
Info
All SCOP Domains
1a: SCOP_d2vasb_ (B:)
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Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All alpha proteins
(14657)
Fold
:
EF Hand-like
(739)
Superfamily
:
EF-hand
(657)
Family
:
Calmodulin-like
(356)
Protein domain
:
Calmodulin
(152)
Fruit fly (Drosophila melanogaster) [TaxId: 7227]
(12)
1a
d2vasb_
B:
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CATH Domains
(0, 0)
Info
all CATH domains
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Sorry, no Info available
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Pfam Domains
(2, 3)
Info
all PFAM domains
1a: PFAM_EF_hand_5_2vasB01 (B:84-145)
1b: PFAM_EF_hand_5_2vasB02 (B:84-145)
2a: PFAM_Myosin_head_2vasA01 (A:59-759)
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Clans
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Organisms
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)
(
)
Clan
:
EF_hand
(270)
Family
:
EF_hand_5
(126)
Drosophila melanogaster (Fruit fly)
(4)
1a
EF_hand_5-2vasB01
B:84-145
1b
EF_hand_5-2vasB02
B:84-145
Clan
:
P-loop_NTPase
(1112)
Family
:
Myosin_head
(50)
Sus scrofa (Pig)
(4)
2a
Myosin_head-2vasA01
A:59-759
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Asymmetric Unit 1
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Asym.Unit (153 KB)
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