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2V7X
Asym. Unit
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Asym.Unit (150 KB)
Biol.Unit 1 (281 KB)
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(1)
Title
:
X-RAY CRYSTAL STRUCTURE OF 5'-FLUORODEOXYADENOSINE SYNTHASE S158A MUTANT FROM STREPTOMYCES CATTLEYA COMPLEXED WITH THE PRODUCTS, FDA AND MET
Authors
:
D. A. Robinson, X. Zhu, D. O'Hagan, J. H. Naismith
Date
:
02 Aug 07 (Deposition) - 12 Aug 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.96
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A,B,C (2x)
Keywords
:
Fluorinase, Transferase, Biosynthetic Protein
(Keyword Search:
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Reference
:
X. Zhu, D. A. Robinson, A. R. Mcewan, D. O'Hagan, J. H. Naismith
Mechanism Of Enzymatic Fluorination In Streptomyces Cattleya.
J. Am. Chem. Soc. V. 129 14597 2007
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Hetero Components
(2, 6)
Info
All Hetero Components
1a: 5'-FLUORO-5'-DEOXYADENOSINE (5FDa)
1b: 5'-FLUORO-5'-DEOXYADENOSINE (5FDb)
1c: 5'-FLUORO-5'-DEOXYADENOSINE (5FDc)
2a: METHIONINE (METa)
2b: METHIONINE (METb)
2c: METHIONINE (METc)
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No.
Name
Count
Type
Full Name
1
5FD
3
Ligand/Ion
5'-FLUORO-5'-DEOXYADENOSINE
2
MET
3
Mod. Amino Acid
METHIONINE
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Sites
(6, 6)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:21 , SER A:23 , THR A:155 , PHE A:156 , 5FD A:1601 , HOH A:2004 , HOH A:2076 , ASP B:210 , TRP B:217 , SER B:269 , ARG B:270
BINDING SITE FOR RESIDUE MET A1600
2
AC2
SOFTWARE
LEU B:17 , ASP B:21 , SER B:23 , THR B:155 , PHE B:156 , 5FD B:1601 , HOH B:2110 , HOH B:2111 , ASP C:210 , TRP C:217 , PHE C:254 , SER C:269 , ARG C:270 , HOH C:2098
BINDING SITE FOR RESIDUE MET B1600
3
AC3
SOFTWARE
ASP A:210 , PHE A:213 , ASN A:215 , TRP A:217 , SER A:269 , ARG A:270 , ASP C:21 , SER C:23 , THR C:155 , PHE C:156 , 5FD C:1601 , HOH C:2003 , HOH C:2109
BINDING SITE FOR RESIDUE MET C1600
4
AC4
SOFTWARE
ASP A:16 , LEU A:17 , TRP A:50 , TYR A:77 , PRO A:78 , THR A:80 , THR A:155 , PHE A:156 , TYR A:157 , ALA A:158 , MET A:1600 , HOH A:2119 , PHE B:213 , ASN B:215 , PHE B:254 , ARG B:277 , ALA B:279
BINDING SITE FOR RESIDUE 5FD A1601
5
AC5
SOFTWARE
ASP B:16 , TRP B:50 , TYR B:77 , PRO B:78 , THR B:80 , THR B:155 , PHE B:156 , TYR B:157 , ALA B:158 , MET B:1600 , PHE C:213 , ASN C:215 , PHE C:254 , ARG C:277 , ALA C:279
BINDING SITE FOR RESIDUE 5FD B1601
6
AC6
SOFTWARE
PHE A:213 , ASN A:215 , PHE A:254 , ARG A:277 , ALA A:279 , ASP C:16 , LEU C:17 , TRP C:50 , THR C:76 , TYR C:77 , PRO C:78 , THR C:80 , THR C:155 , PHE C:156 , TYR C:157 , ALA C:158 , MET C:1600 , HOH C:2110
BINDING SITE FOR RESIDUE 5FD C1601
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(2, 6)
Info
All SCOP Domains
1a: SCOP_d2v7xa1 (A:193-298)
1b: SCOP_d2v7xb1 (B:193-298)
1c: SCOP_d2v7xc1 (C:193-298)
2a: SCOP_d2v7xa2 (A:8-192)
2b: SCOP_d2v7xb2 (B:8-192)
2c: SCOP_d2v7xc2 (C:8-192)
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Protein Domains
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Organisms
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Class
:
All beta proteins
(24004)
Fold
:
Bacterial fluorinating enzyme, C-terminal domain
(16)
Superfamily
:
Bacterial fluorinating enzyme, C-terminal domain
(16)
Family
:
automated matches
(6)
Protein domain
:
automated matches
(6)
Streptomyces cattleya [TaxId: 29303]
(4)
1a
d2v7xa1
A:193-298
1b
d2v7xb1
B:193-298
1c
d2v7xc1
C:193-298
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
Bacterial fluorinating enzyme, N-terminal domain
(16)
Superfamily
:
Bacterial fluorinating enzyme, N-terminal domain
(16)
Family
:
Bacterial fluorinating enzyme, N-terminal domain
(14)
Protein domain
:
automated matches
(4)
Streptomyces cattleya [TaxId: 29303]
(4)
2a
d2v7xa2
A:8-192
2b
d2v7xb2
B:8-192
2c
d2v7xc2
C:8-192
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CATH Domains
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Pfam Domains
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Asymmetric Unit 1
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