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2V74
Asym. Unit
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Asym.Unit (224 KB)
Biol.Unit 1 (111 KB)
Biol.Unit 2 (111 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF COACTIVATOR-ASSOCIATED ARGININE METHYLTRANSFERASE 1 (CARM1), IN COMPLEX WITH S-ADENOSYL-HOMOCYSTEINE
Authors
:
W. W. Yue, M. Hassler, S. M. Roe, V. Thompson-Vale, L. H. Pearl
Date
:
26 Jul 07 (Deposition) - 02 Oct 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.70
Chains
:
Asym. Unit : B,D,F,H
Biol. Unit 1: B,D (1x)
Biol. Unit 2: F,H (1x)
Keywords
:
Arginine Methyltransferase, S-Adenosyl-L-Methionine, Transcription Regulation, Alternative Splicing, Histone Modification, Co- Activator, Methyltransferase, Chromatin Regulator, Nucleus, Cytoplasm, Transferase, Transcription
(Keyword Search:
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Reference
:
W. W. Yue, M. Hassler, S. M. Roe, V. Thompson-Vale, L. H. Pearl
Insights Into Histone Code Syntax From Structural And Biochemical Studies Of Carm1 Methyltransferase
Embo J. V. 26 4402 2007
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Hetero Components
(1, 4)
Info
All Hetero Components
1a: S-ADENOSYL-L-HOMOCYSTEINE (SAHa)
1b: S-ADENOSYL-L-HOMOCYSTEINE (SAHb)
1c: S-ADENOSYL-L-HOMOCYSTEINE (SAHc)
1d: S-ADENOSYL-L-HOMOCYSTEINE (SAHd)
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No.
Name
Count
Type
Full Name
1
SAH
4
Ligand/Ion
S-ADENOSYL-L-HOMOCYSTEINE
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Sites
(4, 4)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
TYR B:150 , PHE B:151 , TYR B:154 , GLN B:160 , MET B:163 , ARG B:169 , GLY B:193 , CYS B:194 , ILE B:198 , LEU B:199 , GLU B:215 , ALA B:216 , GLY B:241 , LYS B:242 , VAL B:243 , GLU B:244 , MET B:269 , SER B:272 , HOH B:2005 , HOH B:2006 , HOH B:2054
BINDING SITE FOR RESIDUE SAH B1478
2
AC2
SOFTWARE
TYR D:150 , PHE D:151 , TYR D:154 , GLN D:160 , MET D:163 , ARG D:169 , GLY D:193 , CYS D:194 , ILE D:198 , LEU D:199 , GLU D:215 , ALA D:216 , GLY D:241 , LYS D:242 , VAL D:243 , GLU D:244 , GLU D:258 , MET D:269 , SER D:272 , HOH D:2004 , HOH D:2067
BINDING SITE FOR RESIDUE SAH D1480
3
AC3
SOFTWARE
TYR F:150 , PHE F:151 , TYR F:154 , GLN F:160 , MET F:163 , ARG F:169 , GLY F:193 , CYS F:194 , GLY F:195 , ILE F:198 , LEU F:199 , GLU F:215 , ALA F:216 , SER F:217 , GLY F:241 , LYS F:242 , VAL F:243 , GLU F:244 , MET F:269 , SER F:272
BINDING SITE FOR RESIDUE SAH F1479
4
AC4
SOFTWARE
PHE H:151 , TYR H:154 , GLN H:160 , MET H:163 , ARG H:169 , GLY H:193 , CYS H:194 , ILE H:198 , LEU H:199 , GLU H:215 , ALA H:216 , GLY H:241 , LYS H:242 , VAL H:243 , GLU H:244 , GLU H:258 , MET H:269 , SER H:272 , HOH H:2004 , HOH H:2008
BINDING SITE FOR RESIDUE SAH H1478
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SAPs(SNPs)/Variants
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PROSITE Patterns/Profiles
(1, 2)
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1: SAM_MT_PRMT (B:147-454,F:147-454)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
SAM_MT_PRMT
PS51678
SAM-dependent methyltransferase PRMT-type domain profile.
CARM1_MOUSE
147-454
2
B:147-454
F:147-454
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Exons
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SCOP Domains
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2v74B01 (B:147-288)
1b: CATH_2v74F01 (F:147-288)
1c: CATH_2v74D01 (D:148-288)
1d: CATH_2v74H01 (H:148-288)
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Organisms
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Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
Vaccinia Virus protein VP39
(378)
Mouse (Mus musculus)
(2)
1a
2v74B01
B:147-288
1b
2v74F01
F:147-288
1c
2v74D01
D:148-288
1d
2v74H01
H:148-288
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_PRMT5_2v74H01 (H:148-447)
1b: PFAM_PRMT5_2v74H02 (H:148-447)
1c: PFAM_PRMT5_2v74H03 (H:148-447)
1d: PFAM_PRMT5_2v74H04 (H:148-447)
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Clan
:
NADP_Rossmann
(1239)
Family
:
PRMT5
(4)
Mus musculus (Mouse)
(2)
1a
PRMT5-2v74H01
H:148-447
1b
PRMT5-2v74H02
H:148-447
1c
PRMT5-2v74H03
H:148-447
1d
PRMT5-2v74H04
H:148-447
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Asym.Unit (224 KB)
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