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2V5Q
Biol. Unit 1
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Asym.Unit (146 KB)
Biol.Unit 1 (71 KB)
Biol.Unit 2 (71 KB)
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Title
:
CRYSTAL STRUCTURE OF WILD-TYPE PLK-1 KINASE DOMAIN IN COMPLEX WITH A SELECTIVE DARPIN
Authors
:
T. M. Bandeiras, R. C. Hillig, P. M. Matias, U. Eberspaecher, J. Fanghae M. Thomaz, S. Miranda, K. Crusius, V. Puetter, P. Amstutz, M. Gulotti-Georgieva, H. K. Binz, C. Holz, A. A. P. Schmitz, C. Lang, P. U. Egner, M. A. Carrondo, B. Mueller-Tiemann
Date
:
08 Jul 07 (Deposition) - 01 Apr 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,D (1x)
Biol. Unit 2: B,C (1x)
Keywords
:
Design Ankyrin Repeat Protein, Transferase Complex, Phosphorylation, Nucleotide-Binding, Serine/Threonine-Protein Kinase, Kinase, Nucleus, Transferase, Atp-Binding, Serine/Threonine Protein Kinase
(Keyword Search:
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Reference
:
T. M. Bandeiras, R. C. Hillig, P. M. Matias, U. Eberspaecher, J. Fanghaenel, M. Thomaz, S. Miranda, K. Crusius, V. Puetter, P. Amstutz, M. Gulotti-Georgieva, H. K. Binz, C. Holz, A. A. P. Schmitz C. Lang, P. Donner, U. Egner, M. A. Carrondo, B. Mueller-Tiemann
Structure Pf Wild-Type Plk-1 Kinase Domain In Complex With A Selective Darpin
Acta Crystallogr. , Sect. D V. 64 339 2008
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Hetero Components
(0, 0)
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Sites
(0, 0)
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Sorry, no Info available
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SAPs(SNPs)/Variants
(2, 2)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_041019 (L261F, chain A, )
2: VAR_051659 (N297D, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041019
L
261
F
PLK1_HUMAN
Polymorphism
35056440
A
L
261
F
2
UniProt
VAR_051659
N
297
D
PLK1_HUMAN
Polymorphism
16972799
A
N
297
D
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(2, 2)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:59-82)
2: PROTEIN_KINASE_ST (A:172-184)
;
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PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
PLK1_HUMAN
59-82
1
A:59-82
-
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
PLK1_HUMAN
172-184
1
A:172-184
-
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Exons
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SCOP Domains
(1, 1)
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All SCOP Domains
1a: SCOP_d2v5qc1 (C:21-137)
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Class
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Designed proteins
(167)
Fold
:
Artificial ankyrin repeat proteins
(7)
Superfamily
:
Artificial ankyrin repeat proteins
(7)
Family
:
Artificial ankyrin repeat proteins
(7)
Protein domain
:
4ank
(2)
unidentified [TaxId: 32644]
(1)
1a
d2v5qc1
C:21-137
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_2v5qA01 (A:48-136)
1b: CATH_2v5qB01 (B:48-136)
2a: CATH_2v5qC00 (C:12-141)
2b: CATH_2v5qD00 (D:13-141)
3a: CATH_2v5qA02 (A:137-309)
3b: CATH_2v5qB02 (B:137-309)
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Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2v5qA01
A:48-136
1b
2v5qB01
B:48-136
Class
:
Mainly Alpha
(13335)
Architecture
:
Alpha Horseshoe
(399)
Topology
:
Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat
(320)
Homologous Superfamily
:
[code=1.25.40.20, no name defined]
(65)
Human (Homo sapiens)
(31)
2a
2v5qC00
C:12-141
2b
2v5qD00
D:13-141
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
3a
2v5qA02
A:137-309
3b
2v5qB02
B:137-309
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_Pkinase_2v5qB01 (B:53-305)
1b: PFAM_Pkinase_2v5qB02 (B:53-305)
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Clan
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PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
1a
Pkinase-2v5qB01
B:53-305
1b
Pkinase-2v5qB02
B:53-305
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Asym.Unit (146 KB)
Header - Asym.Unit
Biol.Unit 1 (71 KB)
Header - Biol.Unit 1
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