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Biol. Unit 1
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Asym.Unit (93 KB)
Biol.Unit 1 (253 KB)
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(1)
Title
:
CLASS II ALDOLASE HPCH - MAGNESIUM - OXAMATE COMPLEX
Authors
:
D. Rea, V. Fulop, T. D. H. Bugg, D. I. Roper
Date
:
06 Jul 07 (Deposition) - 02 Oct 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.20
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A,B (3x)
Keywords
:
Lyase, Class Ii Aldolase, Homoprotocatechuate, Aromatic Degradation, Aromatic Hydrocarbons Catabolismhomoprotocatechuate
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
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Reference
:
D. Rea, V. Fulop, T. D. H. Bugg, D. I. Roper
Structure And Mechanism Of Hpch: A Metal Ion Dependent Class Ii Aldolase From The Homoprotocatechuate Degradation Pathway Of Escherichia Coli.
J. Mol. Biol. V. 373 866 2007
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Hetero Components
(2, 12)
Info
All Hetero Components
1a: MAGNESIUM ION (MGa)
1b: MAGNESIUM ION (MGb)
2a: OXAMIC ACID (OXMa)
2b: OXAMIC ACID (OXMb)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
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No.
Name
Count
Type
Full Name
1
MG
-1
Ligand/Ion
MAGNESIUM ION
2
OXM
6
Ligand/Ion
OXAMIC ACID
3
PO4
6
Ligand/Ion
PHOSPHATE ION
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Sites
(6, 6)
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1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLN A:147 , GLU A:149 , ASP A:175 , OXM A:302 , HOH A:2027 , HOH A:2085
BINDING SITE FOR RESIDUE MG A 301
2
AC2
SOFTWARE
ARG A:70 , GLN A:147 , GLU A:149 , GLY A:172 , PRO A:173 , ALA A:174 , ASP A:175 , LEU A:212 , MG A:301 , HOH A:2085
BINDING SITE FOR RESIDUE OXM A 302
3
AC3
SOFTWARE
GLU B:149 , ASP B:175 , OXM B:302 , HOH B:2031 , HOH B:2096
BINDING SITE FOR RESIDUE MG B 301
4
AC4
SOFTWARE
ARG B:70 , GLN B:147 , GLU B:149 , GLY B:172 , PRO B:173 , ALA B:174 , ASP B:175 , LEU B:212 , MG B:301 , HOH B:2096
BINDING SITE FOR RESIDUE OXM B 302
5
AC5
SOFTWARE
LYS A:6 , LYS A:10 , ARG A:109 , GLU A:164 , GLY A:165 , ASP A:167 , HOH A:2109
BINDING SITE FOR RESIDUE PO4 A1260
6
AC6
SOFTWARE
LYS B:6 , LYS B:10 , ARG B:109 , GLU B:164 , GLY B:165 , ASP B:167
BINDING SITE FOR RESIDUE PO4 B1260
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_HpcH_HpaI_2v5kB01 (B:15-242)
1b: PFAM_HpcH_HpaI_2v5kB02 (B:15-242)
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Clan
:
PK_TIM
(63)
Family
:
HpcH_HpaI
(8)
Escherichia coli
(2)
1a
HpcH_HpaI-2v5kB01
B:15-242
1b
HpcH_HpaI-2v5kB02
B:15-242
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