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2V55
Biol. Unit 1
Info
Asym.Unit (402 KB)
Biol.Unit 1 (197 KB)
Biol.Unit 2 (200 KB)
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(1)
Title
:
MECHANISM OF MULTI-SITE PHOSPHORYLATION FROM A ROCK-I:RHOE COMPLEX STRUCTURE
Authors
:
D. Komander, R. Garg, P. T. C. Wan, A. J. Ridley, D. Barford
Date
:
01 Oct 08 (Deposition) - 04 Nov 08 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
3.70
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Serine/Threonine-Protein Kinase, Rhoe, Zinc, Kinase, Rock-I, Membrane, Apoptosis, Cytoplasm, G-Proteins, Methylation, Zinc-Finger, Nucleotide-Binding, Phorbol-Ester Binding, Atp-Binding, Prenylation, Transferase, Lipoprotein, Multi-Site Phosphorylation, Coiled Coil, Gtp-Binding, Polymorphism, Stress Fibres, Metal-Binding, Phosphoprotein, Golgi Apparatus
(Keyword Search:
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Reference
:
D. Komander, R. Garg, P. T. C. Wan, A. J. Ridley, D. Barford
Mechanism Of Multi-Site Phosphorylation From A Rock-I:Rhoe Complex Structure.
Embo J. V. 27 3175 2008
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Hetero Components
(2, 2)
Info
All Hetero Components
1a: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPa)
1b: PHOSPHOAMINOPHOSPHONIC ACID-ADENYL... (ANPb)
2a: GUANOSINE-5'-TRIPHOSPHATE (GTPa)
2b: GUANOSINE-5'-TRIPHOSPHATE (GTPb)
3a: MAGNESIUM ION (MGa)
3b: MAGNESIUM ION (MGb)
3c: MAGNESIUM ION (MGc)
3d: MAGNESIUM ION (MGd)
4a: SULFATE ION (SO4a)
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Label:
No.
Name
Count
Type
Full Name
1
ANP
1
Ligand/Ion
PHOSPHOAMINOPHOSPHONIC ACID-ADENYLATE ESTER
2
GTP
1
Ligand/Ion
GUANOSINE-5'-TRIPHOSPHATE
3
MG
-1
Ligand/Ion
MAGNESIUM ION
4
SO4
-1
Ligand/Ion
SULFATE ION
[
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Sites
(4, 4)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ALA A:86 , LYS A:105 , VAL A:137 , MET A:153 , GLU A:154 , MET A:156 , ASP A:160 , ASP A:198 , LYS A:200 , ASP A:202 , ASP A:216 , PHE A:368 , MG A:1481
BINDING SITE FOR RESIDUE ANP A1480
2
AC2
SOFTWARE
ASN A:203 , ANP A:1480
BINDING SITE FOR RESIDUE MG A1481
3
AC3
SOFTWARE
SER B:32 , GLN B:33 , CYS B:34 , GLY B:35 , LYS B:36 , THR B:37 , ALA B:38 , TYR B:52 , PRO B:54 , THR B:55 , THR B:78 , GLY B:80 , LYS B:136 , ASP B:138 , LEU B:139 , ALA B:179 , LEU B:180 , MG B:1202
BINDING SITE FOR RESIDUE GTP B1201
4
AC4
SOFTWARE
THR B:37 , VAL B:53 , THR B:55 , GTP B:1201
BINDING SITE FOR RESIDUE MG B1202
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SAPs(SNPs)/Variants
(1, 1)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_041055 (S108N, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_041055
S
108
N
ROCK1_HUMAN
Polymorphism
55811609
A
S
108
N
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(3, 3)
Info
All PROSITE Patterns/Profiles
1: PROTEIN_KINASE_ATP (A:82-105)
2: PROTEIN_KINASE_ST (A:194-206)
3: AGC_KINASE_CTER (A:341-404)
;
View:
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End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
PROTEIN_KINASE_ATP
PS00107
Protein kinases ATP-binding region signature.
ROCK1_HUMAN
82-105
1
A:82-105
-
2
PROTEIN_KINASE_ST
PS00108
Serine/Threonine protein kinases active-site signature.
ROCK1_HUMAN
194-206
1
A:194-206
-
3
AGC_KINASE_CTER
PS51285
AGC-kinase C-terminal domain profile.
ROCK1_HUMAN
341-409
1
A:341-404
-
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Exons
(0, 0)
Info
All Exons
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(0, 0)
Info
All SCOP Domains
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Sorry, no Info available
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CATH Domains
(3, 6)
Info
all CATH domains
1a: CATH_2v55A01 (A:6-159,A:359-404)
1b: CATH_2v55C01 (C:6-159,C:359-404)
2a: CATH_2v55D00 (D:19-200)
2b: CATH_2v55B00 (B:20-200)
3a: CATH_2v55A02 (A:160-358)
3b: CATH_2v55C02 (C:160-358)
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)
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(
)
(
)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
2-Layer Sandwich
(8480)
Topology
:
Phosphorylase Kinase; domain 1
(1392)
Homologous Superfamily
:
Phosphorylase Kinase; domain 1
(1392)
Human (Homo sapiens)
(1036)
1a
2v55A01
A:6-159,A:359-404
1b
2v55C01
C:6-159,C:359-404
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Rossmann fold
(7312)
Homologous Superfamily
:
P-loop containing nucleotide triphosphate hydrolases
(1378)
Human (Homo sapiens)
(413)
2a
2v55D00
D:19-200
2b
2v55B00
B:20-200
Class
:
Mainly Alpha
(13335)
Architecture
:
Orthogonal Bundle
(10391)
Topology
:
Transferase(Phosphotransferase); domain 1
(1379)
Homologous Superfamily
:
Transferase(Phosphotransferase) domain 1
(1379)
Human (Homo sapiens)
(1049)
3a
2v55A02
A:160-358
3b
2v55C02
C:160-358
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Pfam Domains
(3, 6)
Info
all PFAM domains
1a: PFAM_Ras_2v55D01 (D:25-199)
1b: PFAM_Ras_2v55D02 (D:25-199)
2a: PFAM_Pkinase_2v55C01 (C:76-338)
2b: PFAM_Pkinase_2v55C02 (C:76-338)
3a: PFAM_Pkinase_C_2v55C03 (C:358-402)
3b: PFAM_Pkinase_C_2v55C04 (C:358-402)
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Organisms
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Clan
:
P-loop_NTPase
(1112)
Family
:
Ras
(176)
Homo sapiens (Human)
(141)
1a
Ras-2v55D01
D:25-199
1b
Ras-2v55D02
D:25-199
Clan
:
PKinase
(934)
Family
:
Pkinase
(680)
Homo sapiens (Human)
(521)
2a
Pkinase-2v55C01
C:76-338
2b
Pkinase-2v55C02
C:76-338
Clan
:
no clan defined [family: Pkinase_C]
(22)
Family
:
Pkinase_C
(22)
Homo sapiens (Human)
(21)
3a
Pkinase_C-2v55C03
C:358-402
3b
Pkinase_C-2v55C04
C:358-402
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