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2V4O
Asym. Unit
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Asym.Unit (161 KB)
Biol.Unit 1 (78 KB)
Biol.Unit 2 (80 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF SALMONELLA TYPHIMURIUM SURE AT 2.75 ANGSTROM RESOLUTION IN MONOCLINIC FORM
Authors
:
P. Anju, H. S. Savithri, M. R. N. Murthy
Date
:
26 Sep 08 (Deposition) - 09 Dec 08 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.71
Chains
:
Asym. Unit : A,B,C,D
Biol. Unit 1: A,B (1x)
Biol. Unit 2: C,D (1x)
Keywords
:
Mononucleotidase, Survival Protein, Stationary Phase, Sur E, Hydrolase, Phosphatase, Divalent Metal Ion, Nucleotide-Binding, Multifunctional Enzyme, Rossmann Fold, Metal-Binding, Domain Swapping
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Reference
:
A. Pappachan, H. S. Savithri, M. R. N. Murthy
Structural And Functional Studies On A Mesophilic Stationary Phase Survival Protein (Sur E) From Salmonella Typhimurium
Febs J. V. 275 5855 2008
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Hetero Components
(3, 7)
Info
All Hetero Components
1a: GLYCEROL (GOLa)
2a: MAGNESIUM ION (MGa)
2b: MAGNESIUM ION (MGb)
2c: MAGNESIUM ION (MGc)
2d: MAGNESIUM ION (MGd)
3a: PHOSPHATE ION (PO4a)
3b: PHOSPHATE ION (PO4b)
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No.
Name
Count
Type
Full Name
1
GOL
1
Ligand/Ion
GLYCEROL
2
MG
4
Ligand/Ion
MAGNESIUM ION
3
PO4
2
Ligand/Ion
PHOSPHATE ION
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Sites
(7, 7)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
3: AC3 (SOFTWARE)
4: AC4 (SOFTWARE)
5: AC5 (SOFTWARE)
6: AC6 (SOFTWARE)
7: AC7 (SOFTWARE)
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No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
ASP A:8 , ASP A:9 , SER A:39 , ASN A:92 , PO4 A:1255
BINDING SITE FOR RESIDUE MG A1254
2
AC2
SOFTWARE
ASP B:8 , ASP B:9 , SER B:39 , ASN B:92
BINDING SITE FOR RESIDUE MG B1254
3
AC3
SOFTWARE
ASP C:8 , ASP C:9 , SER C:39 , ASN C:92
BINDING SITE FOR RESIDUE MG C1254
4
AC4
SOFTWARE
ASP D:8 , ASP D:9 , SER D:39 , ASN D:92 , PO4 D:1256
BINDING SITE FOR RESIDUE MG D1254
5
AC5
SOFTWARE
LEU C:45 , GLU C:112 , TYR D:103 , ALA D:182 , GLY D:200 , PRO D:202
BINDING SITE FOR RESIDUE GOL D1255
6
AC6
SOFTWARE
ASP D:8 , SER D:39 , GLY D:40 , ASN D:92 , ASN D:96 , SER D:104 , GLY D:105 , THR D:106 , MG D:1254
BINDING SITE FOR RESIDUE PO4 D1256
7
AC7
SOFTWARE
ASP A:8 , SER A:39 , GLY A:40 , ASN A:92 , ASN A:96 , SER A:104 , GLY A:105 , THR A:106 , MG A:1254
BINDING SITE FOR RESIDUE PO4 A1255
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(1, 4)
Info
All SCOP Domains
1a: SCOP_d2v4oa_ (A:)
1b: SCOP_d2v4ob_ (B:)
1c: SCOP_d2v4oc_ (C:)
1d: SCOP_d2v4od_ (D:)
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Protein Domains
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)
(
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Organisms
(
)
(
)
Class
:
Alpha and beta proteins (a/b)
(23833)
Fold
:
SurE-like
(17)
Superfamily
:
SurE-like
(17)
Family
:
automated matches
(12)
Protein domain
:
automated matches
(12)
Salmonella typhimurium [TaxId: 99287]
(4)
1a
d2v4oa_
A:
1b
d2v4ob_
B:
1c
d2v4oc_
C:
1d
d2v4od_
D:
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CATH Domains
(1, 4)
Info
all CATH domains
1a: CATH_2v4oA00 (A:0-253)
1b: CATH_2v4oB00 (B:0-253)
1c: CATH_2v4oC00 (C:0-253)
1d: CATH_2v4oD00 (D:-4-253)
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)
Organisms
(
)
(
)
Class
:
Alpha Beta
(26913)
Architecture
:
3-Layer(aba) Sandwich
(12045)
Topology
:
Stationary-phase Survival Protein Sure Homolog; Chain: A,
(14)
Homologous Superfamily
:
[code=3.40.1210.10, no name defined]
(14)
Salmonella typhimurium. Organism_taxid: 99287. Strain: lt2.
(2)
1a
2v4oA00
A:0-253
1b
2v4oB00
B:0-253
1c
2v4oC00
C:0-253
1d
2v4oD00
D:-4-253
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Pfam Domains
(1, 4)
Info
all PFAM domains
1a: PFAM_SurE_2v4oD01 (D:1-184)
1b: PFAM_SurE_2v4oD02 (D:1-184)
1c: PFAM_SurE_2v4oD03 (D:1-184)
1d: PFAM_SurE_2v4oD04 (D:1-184)
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Clan
:
no clan defined [family: SurE]
(4)
Family
:
SurE
(4)
Salmonella typhimurium
(2)
1a
SurE-2v4oD01
D:1-184
1b
SurE-2v4oD02
D:1-184
1c
SurE-2v4oD03
D:1-184
1d
SurE-2v4oD04
D:1-184
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Asym.Unit (161 KB)
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