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2V34
Biol. Unit 2
Info
Asym.Unit (106 KB)
Biol.Unit 1 (53 KB)
Biol.Unit 2 (51 KB)
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(1)
Title
:
ISPE IN COMPLEX WITH CYTIDINE AND LIGAND
Authors
:
T. Sgraja, M. S. Alphey, W. N. Hunter
Date
:
11 Jun 07 (Deposition) - 26 Jun 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.30
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Transferase, 4-Diphosphocytidyl-2C-Methyl-D-Erythritol, Aquifex Aeolicus, Nucleotide-Binding, Isoprene Biosynthesis, Kinase, Atp-Binding, Non-Mevalonate
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Sgraja, M. S. Alphey, S. Ghilagaber, R. Marquez, M. N. Robertson, J. L. Hemmings, S. Lauw, F. Rohdich, A. Bacher, W. Eisenreich, V. Illarionova, W. N. Hunter
Characterization Of Aquifex Aeolicus 4- Diphosphocytidyl-2C-Methyl-D-Erythritol Kinase - Ligand Recognition In A Template For Antimicrobial Drug Discovery.
Febs J. V. 275 2779 2008
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Hetero Components
(3, 5)
Info
All Hetero Components
1a: CHLORIDE ION (CLa)
1b: CHLORIDE ION (CLb)
2a: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1... (CTNa)
2b: 4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1... (CTNb)
3a: [(1E,3R,4S)-4-FLUORO-3,5-DIHYDROXY... (SG3a)
4a: SULFATE ION (SO4a)
4b: SULFATE ION (SO4b)
4c: SULFATE ION (SO4c)
4d: SULFATE ION (SO4d)
4e: SULFATE ION (SO4e)
4f: SULFATE ION (SO4f)
4g: SULFATE ION (SO4g)
4h: SULFATE ION (SO4h)
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No.
Name
Count
Type
Full Name
1
CL
-1
Ligand/Ion
CHLORIDE ION
2
CTN
1
Ligand/Ion
4-AMINO-1-BETA-D-RIBOFURANOSYL-2(1H)-PYRIMIDINONE
3
SG3
1
Ligand/Ion
[(1E,3R,4S)-4-FLUORO-3,5-DIHYDROXY-4-METHYLPENT-1-EN-1-YL]PHOSPHONIC ACID
4
SO4
3
Ligand/Ion
SULFATE ION
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Sites
(6, 6)
Info
All Sites
1: AC7 (SOFTWARE)
2: AC8 (SOFTWARE)
3: AC9 (SOFTWARE)
4: BC1 (SOFTWARE)
5: BC3 (SOFTWARE)
6: BC4 (SOFTWARE)
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Name
Evidence
Residues
Description
1
AC7
SOFTWARE
ASN B:206 , PHE B:234 , VAL B:235 , HOH B:2168
BINDING SITE FOR RESIDUE CL B1271
2
AC8
SOFTWARE
ARG B:213 , TYR B:223 , ARG B:224
BINDING SITE FOR RESIDUE SO4 B1272
3
AC9
SOFTWARE
SER B:170 , THR B:171 , GLY B:172 , CTN B:1269 , HOH B:2217 , HOH B:2218
BINDING SITE FOR RESIDUE SO4 B1273
4
BC1
SOFTWARE
ASN B:220 , ARG B:224
BINDING SITE FOR RESIDUE SO4 B1274
5
BC3
SOFTWARE
TYR B:24 , HIS B:25 , LYS B:145 , THR B:171 , TYR B:175 , SO4 B:1273 , HOH B:2210
BINDING SITE FOR RESIDUE CTN B1269
6
BC4
SOFTWARE
LYS B:9 , PRO B:88 , PRO B:89 , GLY B:90 , GLY B:92 , LEU B:93 , GLY B:94 , GLY B:95 , GLY B:96 , THR B:171 , GLY B:237 , SER B:238 , HOH B:2126 , HOH B:2213 , HOH B:2214 , HOH B:2215
BINDING SITE FOR RESIDUE SG3 B1270
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SAPs(SNPs)/Variants
(0, 0)
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
(1, 2)
Info
all PFAM domains
1a: PFAM_GHMP_kinases_N_2v34B01 (B:80-138)
1b: PFAM_GHMP_kinases_N_2v34B02 (B:80-138)
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Clan
:
S5
(103)
Family
:
GHMP_kinases_N
(23)
Aquifex aeolicus
(5)
1a
GHMP_kinases_N-2v34B01
B:80-138
1b
GHMP_kinases_N-2v34B02
B:80-138
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Chain B
Asymmetric Unit 1
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Asym.Unit (106 KB)
Header - Asym.Unit
Biol.Unit 1 (53 KB)
Header - Biol.Unit 1
Biol.Unit 2 (51 KB)
Header - Biol.Unit 2
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