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2V33
Biol. Unit 1
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Asym.Unit (69 KB)
Biol.Unit 1 (32 KB)
Biol.Unit 2 (35 KB)
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Title
:
HIGH RESOLUTION CRYSTAL STRUCTURE OF DOMAIN III OF E1 FUSION GLYCOPROTEIN OF SEMLIKI FOREST VIRUS
Authors
:
M. C. Vaney, F. A. Rey
Date
:
11 Jun 07 (Deposition) - 22 Jul 08 (Release) - 16 Apr 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.55
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Glycoprotein, Transmembrane, Viral Protein
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. C. Vaney, A. Vigouroux, F. A. Rey
High Resolution Structure Of Domain Iii From Class Ii Fusion Protein Of Semliki Forest Virus
To Be Published
(for further references see the
PDB file header
)
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: NITRATE ION (NO3a)
1b: NITRATE ION (NO3b)
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Label:
No.
Name
Count
Type
Full Name
1
NO3
2
Ligand/Ion
NITRATE ION
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
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Select:
Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
HIS A:331 , HIS A:333 , VAL A:366 , SER A:368 , HOH A:2066
BINDING SITE FOR RESIDUE NO3 A1383
2
AC2
SOFTWARE
GLN A:340 , GLU A:341 , GLN B:340 , GLU B:341 , HIS B:355
BINDING SITE FOR RESIDUE NO3 A1384
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SAPs(SNPs)/Variants
(5, 5)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
1: VAR_POLS_SFV_017 (I297T, chain A, )
2: VAR_POLS_SFV_018 (T319K, chain A, )
3: VAR_POLS_SFV_019 (N323D, chain A, )
4: VAR_POLS_SFV_020 (G350R, chain A, )
5: VAR_POLS_SFV_021 (R373K, chain A, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_POLS_SFV_017
*
I
1112
T
POLS_SFV
---
---
A
I
297
T
2
UniProt
VAR_POLS_SFV_018
*
T
1134
K
POLS_SFV
---
---
A
T
319
K
3
UniProt
VAR_POLS_SFV_019
*
N
1138
D
POLS_SFV
---
---
A
N
323
D
4
UniProt
VAR_POLS_SFV_020
*
G
1165
R
POLS_SFV
---
---
A
G
350
R
5
UniProt
VAR_POLS_SFV_021
*
R
1188
K
POLS_SFV
---
---
A
R
373
K
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(, 0)
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Exons
(0, 0)
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
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SCOP Domains
(1, 2)
Info
All SCOP Domains
1a: SCOP_d2v33a_ (A:)
1b: SCOP_d2v33b_ (B:)
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(
)
Class
:
All beta proteins
(24004)
Fold
:
Immunoglobulin-like beta-sandwich
(7299)
Superfamily
:
E set domains
(509)
Family
:
Class II viral fusion proteins C-terminal domain
(27)
Protein domain
:
Fusion glycoprotein E1
(3)
Semliki forest virus [TaxId: 11033]
(3)
1a
d2v33a_
A:
1b
d2v33b_
B:
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CATH Domains
(0, 0)
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all CATH domains
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Pfam Domains
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Asymmetric Unit 1
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Asym.Unit (69 KB)
Header - Asym.Unit
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Header - Biol.Unit 1
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