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2V1S
Asym. Unit
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Asym.Unit (96 KB)
Biol.Unit 1 (17 KB)
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Biol.Unit 3 (17 KB)
Biol.Unit 4 (16 KB)
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Biol.Unit 7 (7 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF RAT TOM20-ALDH PRESEQUENCE COMPLEX
Authors
:
T. Obita, M. Igura, T. Ose, T. Endo, K. Maenaka, D. Kohda
Date
:
29 May 07 (Deposition) - 12 Jun 07 (Release) - 13 Jul 11 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.05
Chains
:
Asym. Unit : A,B,C,D,E,F,G,H,I,J,K,L,M,N
Biol. Unit 1: A,H (1x)
Biol. Unit 2: B,I (1x)
Biol. Unit 3: C,J (1x)
Biol. Unit 4: D,K (1x)
Biol. Unit 5: E,L (1x)
Biol. Unit 6: F,M (1x)
Biol. Unit 7: G,N (1x)
Keywords
:
Flavoprotein, Mitochondrion, Disulfide-Bond Tethering, Steroid Biosynthesis, Protein Transport, Sterol Biosynthesis, Lipid Synthesis, Transit Peptide, Phosphorylation, Nad, Fad, Membrane, Transport, Transmembrane, Oxidoreductase, Outer Membrane, Membrane Protein/Oxidoreductase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
T. Saitoh, M. Igura, T. Obita, T. Ose, R. Kojima, K. Maenaka, T. Endo, D. Kohda
Tom20 Recognizes Mitochondrial Presequences Through Dynamic Equilibrium Among Multiple Bound States.
Embo J. V. 26 4777 2007
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Hetero Components
(1, 6)
Info
All Hetero Components
1a: 2-AMINO-3-MERCAPTO-PROPIONAMIDE (CY3a)
1b: 2-AMINO-3-MERCAPTO-PROPIONAMIDE (CY3b)
1c: 2-AMINO-3-MERCAPTO-PROPIONAMIDE (CY3c)
1d: 2-AMINO-3-MERCAPTO-PROPIONAMIDE (CY3d)
1e: 2-AMINO-3-MERCAPTO-PROPIONAMIDE (CY3e)
1f: 2-AMINO-3-MERCAPTO-PROPIONAMIDE (CY3f)
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No.
Name
Count
Type
Full Name
1
CY3
6
Mod. Amino Acid
2-AMINO-3-MERCAPTO-PROPIONAMIDE
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Sites
(0, 0)
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SAPs(SNPs)/Variants
(0, 0)
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(mutated residues are not available)
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PROSITE Patterns/Profiles
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Exons
(3, 14)
Info
All Exons
Exon 1.2 (- | - | - | - | E:56-57 | - | -)
Exon 1.3 (A:61-84 | B:61-84 | C:58-84 | D:58...)
Exon 1.4 (A:84-126 | B:84-126 | C:84-126 | D...)
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1: Boundary 1.1/1.2
2: Boundary 1.2/1.3
3: Boundary 1.3/1.4
4: Boundary 1.4/1.5
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Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1
ENSRNOT00000027088
1
ENSRNOE00000194302
chr19:
56863167-56862937
231
TOM20_RAT
1-41
41
0
-
-
1.2
ENSRNOT00000027088
2
ENSRNOE00000194357
chr19:
56859134-56859088
47
TOM20_RAT
41-56
16
1
-
-
-
-
E:56-57
-
-
-
-
-
-
2
-
-
1.3
ENSRNOT00000027088
3
ENSRNOE00000194378
chr19:
56857774-56857693
82
TOM20_RAT
57-84
28
7
A:61-84
B:61-84
C:58-84
D:58-84
E:58-84
F:63-84
G:63-76
24
24
27
27
27
22
14
1.4
ENSRNOT00000027088
4
ENSRNOE00000344303
chr19:
56852725-56852583
143
TOM20_RAT
84-131
48
6
A:84-126
B:84-126
C:84-126
D:84-123
E:84-126
F:84-126
-
43
43
43
40
43
43
-
1.5
ENSRNOT00000027088
5
ENSRNOE00000194431
chr19:
56851327-56850851
477
TOM20_RAT
132-145
14
0
-
-
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SCOP Domains
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Pfam Domains
(1, 3)
Info
all PFAM domains
1a: PFAM_MAS20_2v1sE01 (E:59-62)
1b: PFAM_MAS20_2v1sE02 (E:59-62)
1c: PFAM_MAS20_2v1sE03 (E:59-62)
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Clan
:
no clan defined [family: MAS20]
(3)
Family
:
MAS20
(3)
Rattus norvegicus (Rat)
(3)
1a
MAS20-2v1sE01
E:59-62
1b
MAS20-2v1sE02
E:59-62
1c
MAS20-2v1sE03
E:59-62
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Asym.Unit (96 KB)
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