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2UZP
Biol. Unit 3
Info
Asym.Unit (94 KB)
Biol.Unit 1 (32 KB)
Biol.Unit 2 (31 KB)
Biol.Unit 3 (31 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN PROTEIN KINASE C GAMMA.
Authors
:
A. C. W. Pike, A. Amos, C. Johansson, F. Sobott, P. Savitsky, G. Berridge O. Fedorov, C. Umeano, F. Gorrec, G. Bunkoczi, J. Debreczeni, F. Von D C. H. Arrowsmith, A. Edwards, J. Weigelt, M. Sundstrom, S. Knapp
Date
:
30 Apr 07 (Deposition) - 29 May 07 (Release) - 19 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Transferase, Metal-Binding, Kinase, Zinc-Finger, Atp-Binding, Spinocerebellar Ataxia, Calcium-Binding Protein, Serine/Threonine-Protein Kinase, Phospholipid Binding Protein, Nucleotide-Binding, Phorbol- Ester Binding, Phosphorylation, Protein Kinase C, Neurodegeneration
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. C. W. Pike, A. Amos, C. Johansson, F. Sobott, P. Savitsky, G. Berridge, O. Fedorov, C. Umeano, F. Gorrec, G. Bunkoczi, J. Debreczeni, F. Von Delft, C. H. Arrowsmith, A. Edwards, J. Weigelt M. Sundstrom, S. Knapp
Crystal Structure Of C2 Domain Of Protein Kinase C Gamma
To Be Published
[
close entry info
]
Hetero Components
(4, 13)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
2a: COBALT (II) ION (COa)
2b: COBALT (II) ION (COb)
2c: COBALT (II) ION (COc)
3a: D-SERINE (DSNa)
3b: D-SERINE (DSNb)
3c: D-SERINE (DSNc)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
4e: 1,2-ETHANEDIOL (EDOe)
4f: 1,2-ETHANEDIOL (EDOf)
4g: 1,2-ETHANEDIOL (EDOg)
4h: 1,2-ETHANEDIOL (EDOh)
5a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
5b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
5c: PYRIDOXAL-5'-PHOSPHATE (PLPc)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
6c: SULFATE ION (SO4c)
6d: SULFATE ION (SO4d)
6e: SULFATE ION (SO4e)
6f: SULFATE ION (SO4f)
6g: SULFATE ION (SO4g)
6h: SULFATE ION (SO4h)
6i: SULFATE ION (SO4i)
6j: SULFATE ION (SO4j)
6k: SULFATE ION (SO4k)
6l: SULFATE ION (SO4l)
6m: SULFATE ION (SO4m)
6n: SULFATE ION (SO4n)
6o: SULFATE ION (SO4o)
6p: SULFATE ION (SO4p)
6q: SULFATE ION (SO4q)
6r: SULFATE ION (SO4r)
6s: SULFATE ION (SO4s)
6t: SULFATE ION (SO4t)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
CO
-1
Ligand/Ion
COBALT (II) ION
3
DSN
1
Mod. Amino Acid
D-SERINE
4
EDO
4
Ligand/Ion
1,2-ETHANEDIOL
5
PLP
1
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
6
SO4
7
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC2 (SOFTWARE)
02: AC3 (SOFTWARE)
03: CC2 (SOFTWARE)
04: CC6 (SOFTWARE)
05: CC7 (SOFTWARE)
06: CC8 (SOFTWARE)
07: CC9 (SOFTWARE)
08: DC1 (SOFTWARE)
09: DC2 (SOFTWARE)
10: DC3 (SOFTWARE)
11: DC4 (SOFTWARE)
12: DC5 (SOFTWARE)
13: DC6 (SOFTWARE)
14: DC7 (SOFTWARE)
15: DC8 (SOFTWARE)
16: EC3 (SOFTWARE)
17: EC6 (SOFTWARE)
18: EC7 (SOFTWARE)
19: EC8 (SOFTWARE)
20: EC9 (SOFTWARE)
21: FC1 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC2
SOFTWARE
GLU A:237 , MET B:0 , HIS B:154 , PLP B:1294 , CO B:1295 , HOH B:2099 , ARG C:249
BINDING SITE FOR RESIDUE DSN B -1
02
AC3
SOFTWARE
LYS A:232 , ARG A:249 , MET C:0 , HIS C:154 , PLP C:1294 , CO C:1295 , HOH C:2114 , HOH C:2120
BINDING SITE FOR RESIDUE DSN C -1
03
CC2
SOFTWARE
ARG B:181 , ASN B:182 , HOH B:2105 , HOH B:2106 , HOH B:2107 , HOH B:2108 , THR C:218 , HOH C:2053
BINDING SITE FOR RESIDUE SO4 B1301
04
CC6
SOFTWARE
ARG B:157 , ARG B:158 , ASN B:279 , ARG C:157
BINDING SITE FOR RESIDUE SO4 B1305
05
CC7
SOFTWARE
DSN C:-1 , MET C:0 , HIS C:154 , PLP C:1294 , HOH C:2114
BINDING SITE FOR RESIDUE CO C1295
06
CC8
SOFTWARE
ASP C:187 , ASP C:193 , ASP C:246 , TRP C:247 , ASP C:248 , HOH C:2029
BINDING SITE FOR RESIDUE CA C1296
07
CC9
SOFTWARE
ASP C:248 , SER C:251 , ARG C:252 , ASP C:254 , HOH C:2084 , HOH C:2085
BINDING SITE FOR RESIDUE CA C1297
08
DC1
SOFTWARE
MET C:186 , ASP C:187 , ASP C:246 , ASP C:248 , ASP C:254 , SO4 C:1299
BINDING SITE FOR RESIDUE CA C1298
09
DC2
SOFTWARE
ARG C:158 , MET C:186 , ASP C:187 , PRO C:188 , ASP C:248 , SER C:251 , PHE C:255 , CA C:1298 , HOH C:2080 , HOH C:2084 , HOH C:2115 , HOH C:2117
BINDING SITE FOR RESIDUE SO4 C1299
10
DC3
SOFTWARE
HOH A:2018 , HOH A:2019 , ARG C:239 , PHE C:261 , GLY C:262 , GLU C:265 , ASN C:287 , HOH C:2118
BINDING SITE FOR RESIDUE SO4 C1300
11
DC4
SOFTWARE
MET C:0 , HIS C:154 , THR C:155 , ARG C:157 , LYS C:276 , HOH C:2120
BINDING SITE FOR RESIDUE SO4 C1301
12
DC5
SOFTWARE
ARG B:157 , ARG C:157 , ARG C:158 , ASN C:279 , HOH C:2122
BINDING SITE FOR RESIDUE SO4 C1302
13
DC6
SOFTWARE
TYR C:195 , LYS C:197 , LYS C:209 , LYS C:211 , EDO C:1308
BINDING SITE FOR RESIDUE SO4 C1303
14
DC7
SOFTWARE
TRP C:245 , ARG C:252 , GLN C:280 , HOH C:2074 , HOH C:2081 , HOH C:2124
BINDING SITE FOR RESIDUE SO4 C1304
15
DC8
SOFTWARE
THR A:218 , HOH A:2061 , HOH A:2062 , ARG C:181 , ASN C:182 , HOH C:2054 , HOH C:2126 , HOH C:2127 , HOH C:2128
BINDING SITE FOR RESIDUE SO4 C1305
16
EC3
SOFTWARE
DSN B:-1 , MET B:0 , HIS B:154 , ALA B:291 , CO B:1295 , HOH B:2099 , LYS C:216 , TRP C:247 , ARG C:249 , EDO C:1307
BINDING SITE FOR RESIDUE PLP B1294
17
EC6
SOFTWARE
LYS A:216 , TRP A:247 , ARG A:249 , DSN C:-1 , MET C:0 , HIS C:154 , THR C:155 , ALA C:291 , CO C:1295 , EDO C:1306 , HOH C:2112 , HOH C:2114
BINDING SITE FOR RESIDUE PLP C1294
18
EC7
SOFTWARE
ASN A:189 , ASP A:193 , LYS A:216 , HIS C:154 , GLU C:156 , PLP C:1294 , HOH C:2129 , HOH C:2130
BINDING SITE FOR RESIDUE EDO C1306
19
EC8
SOFTWARE
THR B:155 , GLU B:156 , PLP B:1294 , ASN C:189 , ASP C:193 , ALA C:217 , HOH C:2131 , HOH C:2132
BINDING SITE FOR RESIDUE EDO C1307
20
EC9
SOFTWARE
LYS C:197 , ARG C:252 , SO4 C:1303 , EDO C:1309
BINDING SITE FOR RESIDUE EDO C1308
21
FC1
SOFTWARE
ARG C:252 , ASN C:253 , EDO C:1308
BINDING SITE FOR RESIDUE EDO C1309
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: C2 (C:170-260)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
C2
PS50004
C2 domain profile.
KPCG_HUMAN
170-260
1
-
-
C:170-260
[
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]
Exons
(0, 0)
Info
All Exons
View:
Select:
Label:
All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2uzpa_ (A:)
1b: SCOP_d2uzpb_ (B:)
1c: SCOP_d2uzpc_ (C:)
View:
Select:
Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
C2 domain-like
(198)
Superfamily
:
C2 domain (Calcium/lipid-binding domain, CaLB)
(148)
Family
:
Synaptotagmin-like (S variant)
(38)
Protein domain
:
automated matches
(6)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d2uzpa_
A:
1b
d2uzpb_
B:
1c
d2uzpc_
C:
[
close SCOP info
]
CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_2uzpA00 (A:0-293)
1b: CATH_2uzpB00 (B:0-293)
1c: CATH_2uzpC00 (C:0-293)
View:
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Classes
(
)
(
)
Architectures
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(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
C2- domain Calcium/lipid binding domain
(78)
Human (Homo sapiens)
(41)
1a
2uzpA00
A:0-293
1b
2uzpB00
B:0-293
1c
2uzpC00
C:0-293
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Label:
Sorry, no Info available
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Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
Chain C
Asymmetric Unit 1
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