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2UZP
Biol. Unit 2
Info
Asym.Unit (94 KB)
Biol.Unit 1 (32 KB)
Biol.Unit 2 (31 KB)
Biol.Unit 3 (31 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE C2 DOMAIN OF HUMAN PROTEIN KINASE C GAMMA.
Authors
:
A. C. W. Pike, A. Amos, C. Johansson, F. Sobott, P. Savitsky, G. Berridge O. Fedorov, C. Umeano, F. Gorrec, G. Bunkoczi, J. Debreczeni, F. Von D C. H. Arrowsmith, A. Edwards, J. Weigelt, M. Sundstrom, S. Knapp
Date
:
30 Apr 07 (Deposition) - 29 May 07 (Release) - 19 Mar 14 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.00
Chains
:
Asym. Unit : A,B,C
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Biol. Unit 3: C (1x)
Keywords
:
Transferase, Metal-Binding, Kinase, Zinc-Finger, Atp-Binding, Spinocerebellar Ataxia, Calcium-Binding Protein, Serine/Threonine-Protein Kinase, Phospholipid Binding Protein, Nucleotide-Binding, Phorbol- Ester Binding, Phosphorylation, Protein Kinase C, Neurodegeneration
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
A. C. W. Pike, A. Amos, C. Johansson, F. Sobott, P. Savitsky, G. Berridge, O. Fedorov, C. Umeano, F. Gorrec, G. Bunkoczi, J. Debreczeni, F. Von Delft, C. H. Arrowsmith, A. Edwards, J. Weigelt M. Sundstrom, S. Knapp
Crystal Structure Of C2 Domain Of Protein Kinase C Gamma
To Be Published
[
close entry info
]
Hetero Components
(4, 11)
Info
All Hetero Components
1a: CALCIUM ION (CAa)
1b: CALCIUM ION (CAb)
1c: CALCIUM ION (CAc)
1d: CALCIUM ION (CAd)
1e: CALCIUM ION (CAe)
1f: CALCIUM ION (CAf)
1g: CALCIUM ION (CAg)
1h: CALCIUM ION (CAh)
1i: CALCIUM ION (CAi)
2a: COBALT (II) ION (COa)
2b: COBALT (II) ION (COb)
2c: COBALT (II) ION (COc)
3a: D-SERINE (DSNa)
3b: D-SERINE (DSNb)
3c: D-SERINE (DSNc)
4a: 1,2-ETHANEDIOL (EDOa)
4b: 1,2-ETHANEDIOL (EDOb)
4c: 1,2-ETHANEDIOL (EDOc)
4d: 1,2-ETHANEDIOL (EDOd)
4e: 1,2-ETHANEDIOL (EDOe)
4f: 1,2-ETHANEDIOL (EDOf)
4g: 1,2-ETHANEDIOL (EDOg)
4h: 1,2-ETHANEDIOL (EDOh)
5a: PYRIDOXAL-5'-PHOSPHATE (PLPa)
5b: PYRIDOXAL-5'-PHOSPHATE (PLPb)
5c: PYRIDOXAL-5'-PHOSPHATE (PLPc)
6a: SULFATE ION (SO4a)
6b: SULFATE ION (SO4b)
6c: SULFATE ION (SO4c)
6d: SULFATE ION (SO4d)
6e: SULFATE ION (SO4e)
6f: SULFATE ION (SO4f)
6g: SULFATE ION (SO4g)
6h: SULFATE ION (SO4h)
6i: SULFATE ION (SO4i)
6j: SULFATE ION (SO4j)
6k: SULFATE ION (SO4k)
6l: SULFATE ION (SO4l)
6m: SULFATE ION (SO4m)
6n: SULFATE ION (SO4n)
6o: SULFATE ION (SO4o)
6p: SULFATE ION (SO4p)
6q: SULFATE ION (SO4q)
6r: SULFATE ION (SO4r)
6s: SULFATE ION (SO4s)
6t: SULFATE ION (SO4t)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
CA
-1
Ligand/Ion
CALCIUM ION
2
CO
-1
Ligand/Ion
COBALT (II) ION
3
DSN
1
Mod. Amino Acid
D-SERINE
4
EDO
2
Ligand/Ion
1,2-ETHANEDIOL
5
PLP
1
Ligand/Ion
PYRIDOXAL-5'-PHOSPHATE
6
SO4
7
Ligand/Ion
SULFATE ION
[
close Hetero Component info
]
Sites
(21, 21)
Info
All Sites
01: AC1 (SOFTWARE)
02: AC2 (SOFTWARE)
03: AC7 (SOFTWARE)
04: AC8 (SOFTWARE)
05: BC5 (SOFTWARE)
06: BC6 (SOFTWARE)
07: BC7 (SOFTWARE)
08: BC8 (SOFTWARE)
09: BC9 (SOFTWARE)
10: CC1 (SOFTWARE)
11: CC2 (SOFTWARE)
12: CC3 (SOFTWARE)
13: CC4 (SOFTWARE)
14: CC5 (SOFTWARE)
15: CC6 (SOFTWARE)
16: DC5 (SOFTWARE)
17: DC9 (SOFTWARE)
18: EC3 (SOFTWARE)
19: EC4 (SOFTWARE)
20: EC5 (SOFTWARE)
21: EC8 (SOFTWARE)
View:
Select:
Label:
No.
Name
Evidence
Residues
Description
01
AC1
SOFTWARE
MET A:0 , HIS A:154 , PLP A:1294 , CO A:1295 , HOH A:2134 , ARG B:249
BINDING SITE FOR RESIDUE DSN A -1
02
AC2
SOFTWARE
GLU A:237 , MET B:0 , HIS B:154 , PLP B:1294 , CO B:1295 , HOH B:2099 , ARG C:249
BINDING SITE FOR RESIDUE DSN B -1
03
AC7
SOFTWARE
ASP A:248 , SER A:251 , ARG A:252 , ASP A:254 , HOH B:2075 , HOH B:2076
BINDING SITE FOR RESIDUE CA A1298
04
AC8
SOFTWARE
MET A:186 , ASP A:187 , PRO A:188 , ASP A:248 , SER A:251 , ASP A:254 , CA A:1297 , HOH A:2098 , HOH A:2135 , HOH A:2136 , ARG B:158 , HOH B:2075
BINDING SITE FOR RESIDUE SO4 A1299
05
BC5
SOFTWARE
DSN B:-1 , MET B:0 , HIS B:154 , PLP B:1294 , HOH B:2099
BINDING SITE FOR RESIDUE CO B1295
06
BC6
SOFTWARE
HOH A:2101 , HOH A:2102 , ASP B:248 , SER B:251 , ARG B:252 , ASP B:254
BINDING SITE FOR RESIDUE CA B1296
07
BC7
SOFTWARE
ASP B:187 , ASP B:193 , ASP B:246 , TRP B:247 , ASP B:248 , HOH B:2028
BINDING SITE FOR RESIDUE CA B1297
08
BC8
SOFTWARE
MET B:186 , ASP B:187 , ASP B:246 , ASP B:248 , ASP B:254 , SO4 B:1299
BINDING SITE FOR RESIDUE CA B1298
09
BC9
SOFTWARE
ARG A:158 , PHE A:255 , HOH A:2102 , MET B:186 , ASP B:187 , PRO B:188 , ASP B:248 , SER B:251 , CA B:1298 , HOH B:2073 , HOH B:2100 , HOH B:2101
BINDING SITE FOR RESIDUE SO4 B1299
10
CC1
SOFTWARE
ARG B:239 , GLY B:262 , GLU B:265 , ASN B:287 , HOH B:2103
BINDING SITE FOR RESIDUE SO4 B1300
11
CC2
SOFTWARE
ARG B:181 , ASN B:182 , HOH B:2105 , HOH B:2106 , HOH B:2107 , HOH B:2108 , THR C:218 , HOH C:2053
BINDING SITE FOR RESIDUE SO4 B1301
12
CC3
SOFTWARE
MET B:0 , HIS B:154 , THR B:155 , ARG B:157 , LYS B:276
BINDING SITE FOR RESIDUE SO4 B1302
13
CC4
SOFTWARE
ARG A:252 , TRP B:245 , ARG B:252 , GLN B:280 , HOH B:2087 , HOH B:2110
BINDING SITE FOR RESIDUE SO4 B1303
14
CC5
SOFTWARE
TYR B:195 , LYS B:209 , LYS B:211 , EDO B:1307
BINDING SITE FOR RESIDUE SO4 B1304
15
CC6
SOFTWARE
ARG B:157 , ARG B:158 , ASN B:279 , ARG C:157
BINDING SITE FOR RESIDUE SO4 B1305
16
DC5
SOFTWARE
ARG B:157 , ARG C:157 , ARG C:158 , ASN C:279 , HOH C:2122
BINDING SITE FOR RESIDUE SO4 C1302
17
DC9
SOFTWARE
DSN A:-1 , MET A:0 , HIS A:154 , ALA A:291 , CO A:1295 , HOH A:2134 , LYS B:216 , ARG B:249
BINDING SITE FOR RESIDUE PLP A1294
18
EC3
SOFTWARE
DSN B:-1 , MET B:0 , HIS B:154 , ALA B:291 , CO B:1295 , HOH B:2099 , LYS C:216 , TRP C:247 , ARG C:249 , EDO C:1307
BINDING SITE FOR RESIDUE PLP B1294
19
EC4
SOFTWARE
HIS A:154 , GLU A:156 , ASN B:189 , ASP B:193 , HOH B:2113 , HOH B:2114
BINDING SITE FOR RESIDUE EDO B1306
20
EC5
SOFTWARE
LYS B:197 , TRP B:245 , ARG B:252 , SO4 B:1304 , HOH B:2115
BINDING SITE FOR RESIDUE EDO B1307
21
EC8
SOFTWARE
THR B:155 , GLU B:156 , PLP B:1294 , ASN C:189 , ASP C:193 , ALA C:217 , HOH C:2131 , HOH C:2132
BINDING SITE FOR RESIDUE EDO C1307
[
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]
SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
All SNPs/Variants
View:
Select:
Label:
Sorry, no Info available
[
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]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: C2 (B:170-260)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
C2
PS50004
C2 domain profile.
KPCG_HUMAN
170-260
1
-
B:170-260
-
[
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]
Exons
(0, 0)
Info
All Exons
View:
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All Exon Boundaries
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
(no "Exon" information available for biological units yet)
SCOP Domains
(1, 3)
Info
All SCOP Domains
1a: SCOP_d2uzpa_ (A:)
1b: SCOP_d2uzpb_ (B:)
1c: SCOP_d2uzpc_ (C:)
View:
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Label:
Classes
(
)
(
)
Folds
(
)
(
)
Superfamilies
(
)
(
)
Families
(
)
(
)
Protein Domains
(
)
(
)
Organisms
(
)
(
)
Class
:
All beta proteins
(24004)
Fold
:
C2 domain-like
(198)
Superfamily
:
C2 domain (Calcium/lipid-binding domain, CaLB)
(148)
Family
:
Synaptotagmin-like (S variant)
(38)
Protein domain
:
automated matches
(6)
Human (Homo sapiens) [TaxId: 9606]
(2)
1a
d2uzpa_
A:
1b
d2uzpb_
B:
1c
d2uzpc_
C:
[
close SCOP info
]
CATH Domains
(1, 3)
Info
all CATH domains
1a: CATH_2uzpA00 (A:0-293)
1b: CATH_2uzpB00 (B:0-293)
1c: CATH_2uzpC00 (C:0-293)
View:
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Classes
(
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(
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Architectures
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(
)
Topologies
(
)
(
)
Homologous Superfamilies
(
)
(
)
Organisms
(
)
(
)
Class
:
Mainly Beta
(13760)
Architecture
:
Sandwich
(5577)
Topology
:
Immunoglobulin-like
(3897)
Homologous Superfamily
:
C2- domain Calcium/lipid binding domain
(78)
Human (Homo sapiens)
(41)
1a
2uzpA00
A:0-293
1b
2uzpB00
B:0-293
1c
2uzpC00
C:0-293
[
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]
Pfam Domains
(0, 0)
Info
all PFAM domains
View:
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Sorry, no Info available
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Atom Selection
(currently selected atoms:
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All Atoms
Protein & NOT Variant
Protein & NOT Site
Protein & NOT PROSITE
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