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2UZJ
Asym. Unit
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Asym.Unit (174 KB)
Biol.Unit 1 (86 KB)
Biol.Unit 2 (86 KB)
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(1)
Title
:
CRYSTAL STRUCTURE OF THE MATURE STREPTOCOCCAL CYSTEINE PROTEASE, MSPEB
Authors
:
J. G. Olsen, R. Dagil, L. M. Niclasen, O. E. Soerensen, B. B. Kragelund
Date
:
16 Sep 08 (Deposition) - 08 Sep 09 (Release) - 07 Apr 10 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
1.55
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Proteinase, Papain Family, Cysteine Protease, Hydrolase, Dimer, Clan Ca, Exotoxin, Family 10, Peptidase
(Keyword Search:
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Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
J. G. Olsen, R. Dagil, L. M. Niclasen, O. E. Soerensen, B. B. Kragelund
Structure Of The Mature Streptococcal Cysteine Protease Exotoxin Mspeb In Its Active Dimeric Form.
J. Mol. Biol. V. 393 693 2009
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Hetero Components
(1, 2)
Info
All Hetero Components
1a: N-[N-[1-HYDROXYCARBOXYETHYL-CARBON... (E64a)
1b: N-[N-[1-HYDROXYCARBOXYETHYL-CARBON... (E64b)
View:
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Label:
No.
Name
Count
Type
Full Name
1
E64
2
Ligand/Ion
N-[N-[1-HYDROXYCARBOXYETHYL-CARBONYL]LEUCYLAMINO-BUTYL]-GUANIDINE
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Sites
(2, 2)
Info
All Sites
1: AC1 (SOFTWARE)
2: AC2 (SOFTWARE)
View:
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Label:
No.
Name
Evidence
Residues
Description
1
AC1
SOFTWARE
GLN A:17 , CYS A:47 , ASP A:130 , GLY A:136 , SER A:137 , GLY A:188 , GLY A:194 , HIS A:195 , HOH A:2165 , HOH A:2166 , GLN B:36 , SER B:37
BINDING SITE FOR RESIDUE E64 A1254
2
AC2
SOFTWARE
GLN A:36 , SER A:37 , GLN B:17 , CYS B:47 , VAL B:48 , ASP B:128 , ASP B:130 , SER B:135 , GLY B:136 , SER B:137 , ALA B:138 , GLN B:187 , GLY B:194 , HIS B:195 , HOH B:2018 , HOH B:2092 , HOH B:2099 , HOH B:2166 , HOH B:2167
BINDING SITE FOR RESIDUE E64 B1254
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SAPs(SNPs)/Variants
(7, 13)
Info
(mutated residues are not available)
All SNPs/Variants
1: VAR_SPEB_STRPY_005 (D9N, chain A/B, )
2: VAR_SPEB_STRPY_006 (L66V, chain A/B, )
3: VAR_SPEB_STRPY_007 (I160V, chain A/B, )
4: VAR_SPEB_STRPY_008 (S163G, chain A/B, )
5: VAR_SPEB_STRPY_009 (A172S, chain A/B, )
6: VAR_SPEB_STRPY_010 (G239D, chain A, )
7: VAR_SPEB_STRPY_011 (V249I, chain A/B, )
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dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
1
UniProt
VAR_SPEB_STRPY_005
*
D
154
N
SPEB_STRPY
---
---
A/B
D
9
N
2
UniProt
VAR_SPEB_STRPY_006
*
L
211
V
SPEB_STRPY
---
---
A/B
L
66
V
3
UniProt
VAR_SPEB_STRPY_007
*
I
305
V
SPEB_STRPY
---
---
A/B
I
160
V
4
UniProt
VAR_SPEB_STRPY_008
*
S
308
G
SPEB_STRPY
---
---
A/B
S
163
G
5
UniProt
VAR_SPEB_STRPY_009
*
A
317
S
SPEB_STRPY
---
---
A/B
A
172
S
6
UniProt
VAR_SPEB_STRPY_010
*
G
384
D
SPEB_STRPY
---
---
A
G
239
D
7
UniProt
VAR_SPEB_STRPY_011
*
V
394
I
SPEB_STRPY
---
---
A/B
V
249
I
* ID not provided by source
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
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PROSITE Patterns/Profiles
(0, 0)
Info
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;
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End label:
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Exons
(0, 0)
Info
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Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
SCOP Domains
(0, 0)
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CATH Domains
(0, 0)
Info
all CATH domains
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Pfam Domains
(2, 4)
Info
all PFAM domains
1a: PFAM_Peptidase_C10_2uzjB01 (B:15-223)
1b: PFAM_Peptidase_C10_2uzjB02 (B:15-223)
2a: PFAM_Inhibitor_I69_2uzjB03 (B:1-11)
2b: PFAM_Inhibitor_I69_2uzjB04 (B:1-11)
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Clans
(
)
(
)
Families
(
)
(
)
Organisms
(
)
(
)
Clan
:
Peptidase_CA
(169)
Family
:
Peptidase_C10
(3)
Streptococcus pyogenes
(2)
1a
Peptidase_C10-2uzjB01
B:15-223
1b
Peptidase_C10-2uzjB02
B:15-223
Clan
:
no clan defined [family: Inhibitor_I69]
(3)
Family
:
Inhibitor_I69
(3)
Streptococcus pyogenes
(2)
2a
Inhibitor_I69-2uzjB03
B:1-11
2b
Inhibitor_I69-2uzjB04
B:1-11
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Asym.Unit (174 KB)
Header - Asym.Unit
Biol.Unit 1 (86 KB)
Header - Biol.Unit 1
Biol.Unit 2 (86 KB)
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