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2UVE
Biol. Unit 2
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Asym.Unit (200 KB)
Biol.Unit 1 (98 KB)
Biol.Unit 2 (99 KB)
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(1)
Title
:
STRUCTURE OF YERSINIA ENTEROCOLITICA FAMILY 28 EXOPOLYGALACTURONASE
Authors
:
D. W. Abbott, A. B. Boraston
Date
:
09 Mar 07 (Deposition) - 08 May 07 (Release) - 24 Feb 09 (Revision)
Method
:
X-RAY DIFFRACTION
Resolution
:
2.19
Chains
:
Asym. Unit : A,B
Biol. Unit 1: A (1x)
Biol. Unit 2: B (1x)
Keywords
:
Gh28, Pectin, Cell Wall, Hydrolase, Periplasm, Yersinia Enterocolitica, Beta-Helix, Glycosidase, Exo-Activity
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
D. W. Abbott, A. B. Boraston
The Structural Basis For Exopolygalacturonase Activity In A Family 28 Glycoside Hydrolase.
J. Mol. Biol. V. 368 1215 2007
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Hetero Components
(2, 9)
Info
All Hetero Components
1a: ACETATE ION (ACTa)
2a: NICKEL (II) ION (NIa)
2b: NICKEL (II) ION (NIb)
2c: NICKEL (II) ION (NIc)
2d: NICKEL (II) ION (NId)
2e: NICKEL (II) ION (NIe)
2f: NICKEL (II) ION (NIf)
2g: NICKEL (II) ION (NIg)
2h: NICKEL (II) ION (NIh)
2i: NICKEL (II) ION (NIi)
3a: SULFATE ION (SO4a)
3b: SULFATE ION (SO4b)
3c: SULFATE ION (SO4c)
3d: SULFATE ION (SO4d)
3e: SULFATE ION (SO4e)
3f: SULFATE ION (SO4f)
3g: SULFATE ION (SO4g)
3h: SULFATE ION (SO4h)
3i: SULFATE ION (SO4i)
3j: SULFATE ION (SO4j)
3k: SULFATE ION (SO4k)
3l: SULFATE ION (SO4l)
3m: SULFATE ION (SO4m)
3n: SULFATE ION (SO4n)
3o: SULFATE ION (SO4o)
3p: SULFATE ION (SO4p)
3q: SULFATE ION (SO4q)
3r: SULFATE ION (SO4r)
3s: SULFATE ION (SO4s)
View:
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Label:
No.
Name
Count
Type
Full Name
1
ACT
1
Ligand/Ion
ACETATE ION
2
NI
-1
Ligand/Ion
NICKEL (II) ION
3
SO4
8
Ligand/Ion
SULFATE ION
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Sites
(14, 14)
Info
All Sites
01: BC7 (SOFTWARE)
02: BC8 (SOFTWARE)
03: BC9 (SOFTWARE)
04: CC1 (SOFTWARE)
05: CC2 (SOFTWARE)
06: CC3 (SOFTWARE)
07: CC4 (SOFTWARE)
08: CC5 (SOFTWARE)
09: CC6 (SOFTWARE)
10: CC7 (SOFTWARE)
11: CC8 (SOFTWARE)
12: CC9 (SOFTWARE)
13: DC1 (SOFTWARE)
14: DC2 (SOFTWARE)
View:
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No.
Name
Evidence
Residues
Description
01
BC7
SOFTWARE
HIS A:97 , HOH A:2023 , HOH A:2077 , HIS B:97 , HOH B:2049 , HOH B:2155
BINDING SITE FOR RESIDUE NI B1607
02
BC8
SOFTWARE
ASP B:376 , GLY B:401 , HIS B:435 , HOH B:2200 , HOH B:2213 , HOH B:2214
BINDING SITE FOR RESIDUE NI B1608
03
BC9
SOFTWARE
ASP B:270
BINDING SITE FOR RESIDUE NI B1609
04
CC1
SOFTWARE
HIS B:363 , GLN B:389 , GLU B:419
BINDING SITE FOR RESIDUE NI B1610
05
CC2
SOFTWARE
HIS B:302 , GLU B:303
BINDING SITE FOR RESIDUE NI B1611
06
CC3
SOFTWARE
TYR B:230 , ARG B:231 , GLU B:239 , PRO B:250 , ARG B:337
BINDING SITE FOR RESIDUE SO4 B1612
07
CC4
SOFTWARE
LYS B:58 , ARG B:483 , HOH B:2282 , HOH B:2283
BINDING SITE FOR RESIDUE SO4 B1613
08
CC5
SOFTWARE
PRO B:566 , GLY B:587 , ASP B:588 , THR B:589 , HIS B:592
BINDING SITE FOR RESIDUE SO4 B1614
09
CC6
SOFTWARE
ASN B:87 , PHE B:88 , SER B:89 , PRO B:90
BINDING SITE FOR RESIDUE SO4 B1615
10
CC7
SOFTWARE
GLN B:40 , GLN B:42
BINDING SITE FOR RESIDUE SO4 B1616
11
CC8
SOFTWARE
ARG B:488 , ASP B:530 , ASN B:531 , HOH B:2284
BINDING SITE FOR RESIDUE SO4 B1617
12
CC9
SOFTWARE
ASN B:378 , ASN B:379 , SO4 B:1619
BINDING SITE FOR RESIDUE SO4 B1618
13
DC1
SOFTWARE
ASP B:402 , HIS B:435 , LYS B:468 , SO4 B:1618 , HOH B:2285
BINDING SITE FOR RESIDUE SO4 B1619
14
DC2
SOFTWARE
HIS B:97 , TYR B:430 , TYR B:459 , ARG B:488 , HOH B:2046 , HOH B:2048
BINDING SITE FOR RESIDUE ACT B1620
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SAPs(SNPs)/Variants
(0, 0)
Info
(mutated residues are only available for the asymmetric unit)
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PROSITE Patterns/Profiles
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Exons
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SCOP Domains
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CATH Domains
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Pfam Domains
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Chain B
Asymmetric Unit 1
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Asym.Unit (200 KB)
Header - Asym.Unit
Biol.Unit 1 (98 KB)
Header - Biol.Unit 1
Biol.Unit 2 (99 KB)
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