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2RUK
Asym. Unit
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Asym.Unit (704 KB)
Biol.Unit 1 (36 KB)
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Models
(20 )
Title
:
SOLUTION STRUCTURE OF THE COMPLEX BETWEEN P53 TRANSACTIVATION DOMAIN 2 AND TFIIH P62 PH DOMAIN
Authors
:
M. Okuda, Y. Nishimura
Date
:
24 Sep 14 (Deposition) - 15 Oct 14 (Release) - 15 Oct 14 (Revision)
Method
:
SOLUTION NMR
Resolution
:
NOT APPLICABLE
Chains
:
Asym. Unit : A,B (20 x)
Biol. Unit 1: A,B (1x)
Keywords
:
Antitumor Protein, General Transcription Factor, Ph Domain, Transcription
(Keyword Search:
[
Gene Ontology, PubMed, Web (Google)
]
)
Reference
:
M. Okuda, Y. Nishimura
Extended String Binding Mode Of The Phosphorylated Transactivation Domain Of Tumor Suppressor P53
J. Am. Chem. Soc. 2014
[
close entry info
]
Hetero Components
(2, 2)
Info
All Hetero Components
1a: PHOSPHOSERINE (SEPa)
2a: PHOSPHOTHREONINE (TPOa)
View:
Select:
Label:
No.
Name
Count
Type
Full Name
1
SEP
1
Mod. Amino Acid
PHOSPHOSERINE
2
TPO
1
Mod. Amino Acid
PHOSPHOTHREONINE
[
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]
Sites
(0, 0)
Info
All Sites
View:
Select:
Label:
Sorry, no Info available
[
close Site info
]
SAPs(SNPs)/Variants
(32, 32)
Info
(mutated residues are not available in "Model" view)
All SNPs/Variants
01: VAR_044562 (D42Y, chain A, )
02: VAR_005853 (L43S, chain A, )
03: VAR_044563 (M44I, chain A, )
04: VAR_044564 (M44T, chain A, )
05: VAR_044565 (M44V, chain A, )
06: VAR_044566 (L45M, chain A, )
07: VAR_044567 (S46F, chain A, )
08: VAR_044568 (S46P, chain A, )
09: VAR_044569 (P47L, chain A, )
10: VAR_014632 (P47S, chain A, )
11: VAR_044570 (D48G, chain A, )
12: VAR_044571 (D49H, chain A, )
13: VAR_044572 (D49N, chain A, )
14: VAR_044573 (D49Y, chain A, )
15: VAR_044574 (Q52H, chain A, )
16: VAR_005854 (W53C, chain A, )
17: VAR_044575 (W53G, chain A, )
18: VAR_044576 (F54L, chain A, )
19: VAR_044577 (F54Y, chain A, )
20: VAR_044578 (E56K, chain A, )
21: VAR_044579 (E56V, chain A, )
22: VAR_044580 (P58Q, chain A, )
23: VAR_044581 (P58T, chain A, )
24: VAR_044582 (G59C, chain A, )
25: VAR_044583 (G59D, chain A, )
26: VAR_045783 (G59N, chain A, )
27: VAR_044584 (P60L, chain A, )
28: VAR_044585 (P60Q, chain A, )
29: VAR_005855 (P60S, chain A, )
30: VAR_044586 (D61G, chain A, )
31: VAR_044587 (D61N, chain A, )
32: VAR_044588 (E62D, chain A, )
View:
Select:
Label:
dbSNP
PDB
No.
Source
Variant ID
Variant
UniProt ID
Status
ID
Chain
Variant
01
UniProt
VAR_044562
D
42
Y
P53_HUMAN
Unclassified
---
A
D
42
Y
02
UniProt
VAR_005853
L
43
S
P53_HUMAN
Unclassified
---
A
L
43
S
03
UniProt
VAR_044563
M
44
I
P53_HUMAN
Unclassified
---
A
M
44
I
04
UniProt
VAR_044564
M
44
T
P53_HUMAN
Unclassified
---
A
M
44
T
05
UniProt
VAR_044565
M
44
V
P53_HUMAN
Unclassified
---
A
M
44
V
06
UniProt
VAR_044566
L
45
M
P53_HUMAN
Unclassified
---
A
L
45
M
07
UniProt
VAR_044567
S
46
F
P53_HUMAN
Unclassified
---
A
S
46
F
08
UniProt
VAR_044568
S
46
P
P53_HUMAN
Unclassified
---
A
S
46
P
09
UniProt
VAR_044569
P
47
L
P53_HUMAN
Unclassified
---
A
P
47
L
10
UniProt
VAR_014632
P
47
S
P53_HUMAN
Polymorphism
1800371
A
P
47
S
11
UniProt
VAR_044570
D
48
G
P53_HUMAN
Unclassified
---
A
D
48
G
12
UniProt
VAR_044571
D
49
H
P53_HUMAN
Unclassified
---
A
D
49
H
13
UniProt
VAR_044572
D
49
N
P53_HUMAN
Unclassified
---
A
D
49
N
14
UniProt
VAR_044573
D
49
Y
P53_HUMAN
Unclassified
---
A
D
49
Y
15
UniProt
VAR_044574
Q
52
H
P53_HUMAN
Unclassified
---
A
Q
52
H
16
UniProt
VAR_005854
W
53
C
P53_HUMAN
Unclassified
---
A
W
53
C
17
UniProt
VAR_044575
W
53
G
P53_HUMAN
Unclassified
---
A
W
53
G
18
UniProt
VAR_044576
F
54
L
P53_HUMAN
Unclassified
---
A
F
54
L
19
UniProt
VAR_044577
F
54
Y
P53_HUMAN
Unclassified
---
A
F
54
Y
20
UniProt
VAR_044578
E
56
K
P53_HUMAN
Unclassified
---
A
E
56
K
21
UniProt
VAR_044579
E
56
V
P53_HUMAN
Unclassified
---
A
E
56
V
22
UniProt
VAR_044580
P
58
Q
P53_HUMAN
Unclassified
---
A
P
58
Q
23
UniProt
VAR_044581
P
58
T
P53_HUMAN
Unclassified
---
A
P
58
T
24
UniProt
VAR_044582
G
59
C
P53_HUMAN
Unclassified
---
A
G
59
C
25
UniProt
VAR_044583
G
59
D
P53_HUMAN
Unclassified
---
A
G
59
D
26
UniProt
VAR_045783
G
59
N
P53_HUMAN
Unclassified
---
A
G
59
N
27
UniProt
VAR_044584
P
60
L
P53_HUMAN
Unclassified
---
A
P
60
L
28
UniProt
VAR_044585
P
60
Q
P53_HUMAN
Unclassified
---
A
P
60
Q
29
UniProt
VAR_005855
P
60
S
P53_HUMAN
Unclassified
---
A
P
60
S
30
UniProt
VAR_044586
D
61
G
P53_HUMAN
Unclassified
---
A
D
61
G
31
UniProt
VAR_044587
D
61
N
P53_HUMAN
Unclassified
---
A
D
61
N
32
UniProt
VAR_044588
E
62
D
P53_HUMAN
Unclassified
---
A
E
62
D
SNP/SAP Summary Statistics
(UniProtKB/Swiss-Prot)
[
close SNP/Variant info
]
PROSITE Patterns/Profiles
(1, 1)
Info
All PROSITE Patterns/Profiles
1: BSD (B:99-108|-)
;
View:
Select:
Label:
End label:
PROSITE
UniProtKB
PDB
No.
ID
AC
Description
ID
Location
Count
Location
1
BSD
PS50858
BSD domain profile.
TF2H1_HUMAN
99-154
180-232
1
B:99-108
-
[
close PROSITE info
]
Exons
(3, 3)
Info
All Exons
Exon 1.4b (B:1-52)
Exon 1.5c (B:52-108)
Exon 2.4b (A:41-62)
View:
Select:
Label:
All Exon Boundaries
1: Boundary 1.1g/1.4b
2: Boundary 1.4b/1.5c
3: Boundary 1.5c/1.7a
4: Boundary 2.3d/2.4b
5: Boundary 2.4b/2.5d
View:
Label:
Note:
Exon boundaries colored in "red" are actually farther away from the residue due to missing residues in the structure.
ENSEMBL
UniProtKB
PDB
No.
Transcript ID
Exon
Exon ID
Genome Location
Length
ID
Location
Length
Count
Location
Length
1.1g
ENST00000265963
1g
ENSE00002143325
chr11:
18344143-18344287
145
TF2H1_HUMAN
-
0
0
-
-
1.4b
ENST00000265963
4b
ENSE00002171519
chr11:
18354607-18354775
169
TF2H1_HUMAN
1-52
52
1
B:1-52
52
1.5c
ENST00000265963
5c
ENSE00000886580
chr11:
18357301-18357493
193
TF2H1_HUMAN
52-116
65
1
B:52-108
57
1.7a
ENST00000265963
7a
ENSE00000886581
chr11:
18359656-18359821
166
TF2H1_HUMAN
116-171
56
0
-
-
1.8
ENST00000265963
8
ENSE00001597724
chr11:
18361111-18361204
94
TF2H1_HUMAN
172-203
32
0
-
-
1.9
ENST00000265963
9
ENSE00001742103
chr11:
18362808-18362957
150
TF2H1_HUMAN
203-253
51
0
-
-
1.10
ENST00000265963
10
ENSE00001748719
chr11:
18363075-18363154
80
TF2H1_HUMAN
253-279
27
0
-
-
1.11b
ENST00000265963
11b
ENSE00001692627
chr11:
18369135-18369262
128
TF2H1_HUMAN
280-322
43
0
-
-
1.12a
ENST00000265963
12a
ENSE00001662355
chr11:
18369379-18369466
88
TF2H1_HUMAN
322-351
30
0
-
-
1.13b
ENST00000265963
13b
ENSE00001609933
chr11:
18373428-18373516
89
TF2H1_HUMAN
352-381
30
0
-
-
1.14c
ENST00000265963
14c
ENSE00001683216
chr11:
18373876-18373993
118
TF2H1_HUMAN
381-420
40
0
-
-
1.15b
ENST00000265963
15b
ENSE00001765402
chr11:
18379499-18379589
91
TF2H1_HUMAN
421-451
31
0
-
-
1.16a
ENST00000265963
16a
ENSE00001676092
chr11:
18380072-18380187
116
TF2H1_HUMAN
451-489
39
0
-
-
1.17
ENST00000265963
17
ENSE00001763947
chr11:
18382162-18382254
93
TF2H1_HUMAN
490-520
31
0
-
-
1.18d
ENST00000265963
18d
ENSE00001106704
chr11:
18387330-18388577
1248
TF2H1_HUMAN
521-548
28
0
-
-
2.1a
ENST00000269305
1a
ENSE00001146308
chr17:
7590856-7590695
162
P53_HUMAN
-
0
0
-
-
2.3a
ENST00000269305
3a
ENSE00002194362
chr17:
7579940-7579839
102
P53_HUMAN
1-25
25
0
-
-
2.3d
ENST00000269305
3d
ENSE00001710434
chr17:
7579721-7579700
22
P53_HUMAN
25-32
8
0
-
-
2.4b
ENST00000269305
4b
ENSE00001718735
chr17:
7579590-7579312
279
P53_HUMAN
33-125
93
1
A:41-62
22
2.5d
ENST00000269305
5d
ENSE00001255919
chr17:
7578554-7578371
184
P53_HUMAN
126-187
62
0
-
-
2.6a
ENST00000269305
6a
ENSE00001255912
chr17:
7578289-7578177
113
P53_HUMAN
187-224
38
0
-
-
2.7b
ENST00000269305
7b
ENSE00001665758
chr17:
7577608-7577499
110
P53_HUMAN
225-261
37
0
-
-
2.8
ENST00000269305
8
ENSE00001789298
chr17:
7577155-7577019
137
P53_HUMAN
261-307
47
0
-
-
2.9
ENST00000269305
9
ENSE00002149110
chr17:
7576926-7576853
74
P53_HUMAN
307-331
25
0
-
-
2.11
ENST00000269305
11
ENSE00001728015
chr17:
7574033-7573927
107
P53_HUMAN
332-367
36
0
-
-
2.12d
ENST00000269305
12d
ENSE00001757276
chr17:
7573008-7571720
1289
P53_HUMAN
367-393
27
0
-
-
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SCOP Domains
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all CATH domains
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Asym.Unit (704 KB)
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